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Artegoitia VM, Newman JW, Foote AP, Shackelford SD, King DA, Wheeler TL, Lewis RM, Freetly HC. Non-invasive metabolomics biomarkers of production efficiency and beef carcass quality traits. Sci Rep 2022; 12:231. [PMID: 34997076 PMCID: PMC8742028 DOI: 10.1038/s41598-021-04049-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2021] [Accepted: 12/14/2021] [Indexed: 11/25/2022] Open
Abstract
The inter-cattle growth variations stem from the interaction of many metabolic processes making animal selection difficult. We hypothesized that growth could be predicted using metabolomics. Urinary biomarkers of cattle feed efficiency were explored using mass spectrometry-based untargeted and targeted metabolomics. Feed intake and weight-gain was measured in steers (n = 75) on forage-based growing rations (stage-1, 84 days) followed by high-concentrate finishing rations (stage-2, 84 days). Urine from days 0, 21, 42, 63, and 83 in each stage were analyzed from steers with the greater (n = 14) and least (n = 14) average-daily-gain (ADG) and comparable dry-matter-intake (DMI; within 0.32 SD of the mean). Steers were slaughtered after stage-2. Adjusted fat-thickness and carcass-yield-grade increased in greater-ADG-cattle selected in stage-1, but carcass traits did not differ between ADG-selected in stage-2. Overall 85 untargeted metabolites segregated greater- and least-ADG animals, with overlap across diets (both stages) and breed type, despite sampling time effects. Total 18-bile acids (BAs) and 5-steroids were quantified and associated with performance and carcass quality across ADG-classification depending on the stage. Stepwise logistic regression of urinary BA and steroids had > 90% accuracy identifying efficient-ADG-steers. Urine metabolomics provides new insight into the physiological mechanisms and potential biomarkers for feed efficiency.
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Affiliation(s)
- Virginia M Artegoitia
- USDA, ARS, Western Human Nutrition Research Center, 430 West Health Sciences Drive, Davis, CA, 95616, USA. .,USDA, ARS, Meat Animal Research Center, Clay Center, NE, 68933, USA. .,Animal Science, University Nebraska, Lincoln, NE, 68583, USA.
| | - J W Newman
- USDA, ARS, Western Human Nutrition Research Center, 430 West Health Sciences Drive, Davis, CA, 95616, USA
| | - A P Foote
- USDA, ARS, Meat Animal Research Center, Clay Center, NE, 68933, USA.,Animal Science, Oklahoma State University, Stillwater, OK, 74078, USA
| | - S D Shackelford
- USDA, ARS, Meat Animal Research Center, Clay Center, NE, 68933, USA
| | - D A King
- USDA, ARS, Meat Animal Research Center, Clay Center, NE, 68933, USA
| | - T L Wheeler
- USDA, ARS, Meat Animal Research Center, Clay Center, NE, 68933, USA
| | - R M Lewis
- Animal Science, University Nebraska, Lincoln, NE, 68583, USA
| | - H C Freetly
- USDA, ARS, Meat Animal Research Center, Clay Center, NE, 68933, USA
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Liu H, Huang L, Pei X. Effects of sorghum rice and black rice on genes associated with cholesterol metabolism in hypercholesterolemic mice liver and intestine. Food Sci Nutr 2021; 9:217-229. [PMID: 33473286 PMCID: PMC7802551 DOI: 10.1002/fsn3.1986] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2020] [Revised: 10/13/2020] [Accepted: 10/19/2020] [Indexed: 12/18/2022] Open
Abstract
The effects of different proportions of dietary sorghum rice and black rice on the expression of genes related to cholesterol metabolism in mice liver, intestine, and the characteristics of the small intestinal microbiota were investigated. Six types of diets were used to feed C57BL/6 mice: AIN-93M standard diet, high-cholesterol model diet, high-cholesterol and low-dose sorghum grain or black rice diet, and high-cholesterol and high-dose sorghum grain or black rice diet. The results showed that black rice or sorghum grain diets had no effect on the serum TC, LDL-C levels in the hypercholesterolemic mice, whereas these diets decreased serum TG level, and black rice diets increased serum HDL-C level. The diets containing black rice and sorghum grain had no effect on liver TC, TG, HDL-C levels. However, these diets decreased LDL-C levels significantly except high dose of black rice. The black rice or sorghum grain diets reduced the expression of the genes encoding liver 3-hydroxyl-3-methyl-glutarate monoacyl coenzyme A reductase (HMG-CoA-R) and increased the expression of SREBP-2, thereby partially inhibiting the synthesis of cholesterol in liver. The diets containing different proportions of black rice and a low proportion of sorghum grain reduced the expression level of Niemann-Pick type C 1 like 1 (NPC1L1) mRNA and increased the mRNA level of the ATP-binding cassette transporters, ABCG5/ABCG8, in the small intestine, thereby reducing cholesterol absorption. A diet containing a low proportion of black rice promoted the expression of ABCA1 mRNA and increased the expression of high-density lipoprotein (HDL) mRNA, thereby promoting reverse cholesterol transport. Black rice diets significantly increased the relative abundances of microbiota in the small intestine and maintained biodiversity, while sorghum grain had no positive effect on the abundance of microbiota.
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Affiliation(s)
- Haiying Liu
- State Key Laboratory of Food Science and TechnologyJiangnan UniversityWuxiChina
- School of Food Science and TechnologyJiangnan UniversityWuxiChina
| | - Lu Huang
- School of Food Science and TechnologyJiangnan UniversityWuxiChina
| | - Xinli Pei
- School of Food Science and TechnologyJiangnan UniversityWuxiChina
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