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Noaman K, Abuelmaali SA, Elnour MAB, Korti M, Ageep T, Baleela RMH. First detection of F1534C kdr insecticide resistance mutation in Aedes aegypti in Sudan. Parasitol Res 2024; 123:178. [PMID: 38578300 DOI: 10.1007/s00436-024-08194-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2023] [Accepted: 03/21/2024] [Indexed: 04/06/2024]
Affiliation(s)
- Kheder Noaman
- Tropical Medicine Research Institute, National Center for Research, P.O. Box 1304, Khartoum, 11111, Sudan
| | - Sara A Abuelmaali
- National Public Health Laboratory, Federal Ministry of Health, Khartoum, Sudan.
| | - Mohamed-Ahmed B Elnour
- Tropical Medicine Research Institute, National Center for Research, P.O. Box 1304, Khartoum, 11111, Sudan
| | - Mohammed Korti
- Tropical Medicine Research Institute, National Center for Research, P.O. Box 1304, Khartoum, 11111, Sudan
| | - Tellal Ageep
- Tropical Medicine Research Institute, National Center for Research, P.O. Box 1304, Khartoum, 11111, Sudan
| | - Rania M H Baleela
- Department of Zoology, Faculty of Science, University of Khartoum, Khartoum, Sudan
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Abuelmaali SA, Mashlawi AM, Ishak IH, Wajidi MFF, Jaal Z, Avicor SW, Kassim NFA. Population genetic structure of Aedes aegypti subspecies in selected geographical locations in Sudan. Sci Rep 2024; 14:2978. [PMID: 38316804 PMCID: PMC10844603 DOI: 10.1038/s41598-024-52591-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2023] [Accepted: 01/20/2024] [Indexed: 02/07/2024] Open
Abstract
Although knowledge of the composition and genetic diversity of disease vectors is important for their management, this is limiting in many instances. In this study, the population structure and phylogenetic relationship of the two Aedes aegypti subspecies namely Aedes aegypti aegypti (Aaa) and Aedes aegypti formosus (Aaf) in eight geographical areas in Sudan were analyzed using seven microsatellite markers. Hardy-Weinberg Equilibrium (HWE) for the two subspecies revealed that Aaa deviated from HWE among the seven microsatellite loci, while Aaf exhibited departure in five loci and no departure in two loci (A10 and M201). The Factorial Correspondence Analysis (FCA) plots revealed that the Aaa populations from Port Sudan, Tokar, and Kassala clustered together (which is consistent with the unrooted phylogenetic tree), Aaf from Fasher and Nyala populations clustered together, and Gezira, Kadugli, and Junaynah populations also clustered together. The Bayesian cluster analysis structured the populations into two groups suggesting two genetically distinct groups (subspecies). Isolation by distance test revealed a moderate to strong significant correlation between geographical distance and genetic variations (p = 0.003, r = 0.391). The migration network created using divMigrate demonstrated that migration and gene exchange between subspecies populations appear to occur based on their geographical proximity. The genetic structure of the Ae. aegypti subspecies population and the gene flow among them, which may be interpreted as the mosquito vector's capacity for dispersal, were revealed in this study. These findings will help in the improvement of dengue epidemiology research including information on the identity of the target vector/subspecies and the arboviruses vector surveillance program.
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Affiliation(s)
- Sara A Abuelmaali
- 129 Medical Entomology Laboratory, School of Biological Sciences, Universiti Sains Malaysia, 11800, Penang, Malaysia
- National Public Health Laboratory, Federal Ministry of Health, Khartoum, 11115, Sudan
| | - Abadi M Mashlawi
- Department of Biology, College of Science, Jazan University, P.O. Box. 114, Jazan, 45142, Kingdom of Saudi Arabia
| | - Intan Haslina Ishak
- 129 Medical Entomology Laboratory, School of Biological Sciences, Universiti Sains Malaysia, 11800, Penang, Malaysia.
- Vector Control Research Unit, School of Biological Sciences, Universiti Sains Malaysia, 11800, Penang, Malaysia.
| | | | - Zairi Jaal
- Vector Control Research Unit, School of Biological Sciences, Universiti Sains Malaysia, 11800, Penang, Malaysia
| | - Silas Wintuma Avicor
- Molecular Entomology Research Group, Universiti Sains Malaysia, 11800, Penang, Malaysia
- Entomology Division, Cocoa Research Institute of Ghana, New Tafo-Akim, Ghana
| | - Nur Faeza Abu Kassim
- 129 Medical Entomology Laboratory, School of Biological Sciences, Universiti Sains Malaysia, 11800, Penang, Malaysia.
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Paksa A, Azizi K, Yousefi S, Dabaghmanesh S, Shahabi S, Sanei-Dehkordi A. First report on the molecular phylogenetics and population genetics of Aedes aegypti in Iran. Parasit Vectors 2024; 17:49. [PMID: 38303048 PMCID: PMC10835860 DOI: 10.1186/s13071-024-06138-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Accepted: 01/12/2024] [Indexed: 02/03/2024] Open
Abstract
BACKGROUND Aedes aegypti, the primary vector of various human arboviral diseases, is a significant public health threat. Aedes aegypti was detected in Iran in 2018, in Hormozgan province, but comprehensive information regarding its genetic diversity and origin within the country remains scarce. This study aimed to determine the origin and genetic diversity of Ae. aegypti in southern Iran. METHODS Aedes aegypti mosquitoes were collected from Bandar Abbas City, Hormozgan Province, southern Iran, between May and July 2022. Specimens were morphologically identified. Origin and assess genetic diversity were assessed based on the mitochondrial DNA-encoded cytochrome c oxidase subunit I (mtDNA-COI) gene. RESULTS BLAST (basic local alignment search tool) analysis confirmed the accuracy of the morphological identification of all specimens as Ae. aegypti, with 100% similarity to GenBank sequences. Calculated variance and haplotype diversity were 0.502 and 0.00157, respectively. Among the 604 examined nucleotide sequences, only a single site was non-synonymous. Total nucleotide diversity and average pairwise nucleotides were determined as 0.00083 and 0.502, respectively. Fu and Li's D test values were not statistically significant. Strobeck's S statistic value was 0.487, and Tajima's D value was 1.53395; both were not statistically significant (P > 0.10). CONCLUSIONS Phylogenetic analysis revealed two distinct clades with minimal nucleotide differences and low haplotype diversity, suggesting the recent establishment of Ae. Aegypti in the southern region of Iran. The phylogenetic analysis also indicated an association between Ae. aegypti populations and mosquitoes from Saudi Arabia and Pakistan.
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Affiliation(s)
- Azim Paksa
- Department of Biology and Control of Disease Vectors, School of Health, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Kourosh Azizi
- Department of Biology and Control of Disease Vectors, School of Health, Shiraz University of Medical Sciences, Shiraz, Iran
| | | | - Sorna Dabaghmanesh
- Department of Biology and Control of Disease Vectors, School of Health, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Saeed Shahabi
- Department of Biology and Control of Disease Vectors, School of Health, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Alireza Sanei-Dehkordi
- Infectious and Tropical Diseases Research Center, Hormozgan Health Institute, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
- Department of Biology and Control of Disease Vectors, Faculty of Health, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
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de Sousa AA, Cruz ACR, da Silva FS, da Silva SP, Neto JPN, Barros MC, Fraga EDC, Sampaio I. Sequencing and Analysis of the Mitochondrial Genome of Aedes aegypti (Diptera: Culicidae) from the Brazilian Amazon Region. INSECTS 2023; 14:938. [PMID: 38132611 PMCID: PMC10744036 DOI: 10.3390/insects14120938] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2023] [Accepted: 11/03/2023] [Indexed: 12/23/2023]
Abstract
Aedes aegypti is a mosquito native to the African continent, which is now widespread in the tropical and subtropical regions of the world. In many regions, it represents a major challenge to public health, given its role in the cycle of transmission of important arboviruses, such as Dengue, Zika, and Chikungunya. Considering the epidemiological importance of Ae. aegypti, the present study sequenced the partial mitochondrial genome of a sample collected in the municipality of Balsas, in the Brazilian state of Maranhão, followed by High Throughput Sequencing and phylogenetic analyses. The mitochondrial sequence obtained here was 15,863 bp long, and contained 37 functional subunits (thirteen PCGs, twenty-two tRNAs and two rRNAs) in addition to a partial final portion rich in A+T. The data obtained here contribute to the enrichment of our knowledge of the taxonomy and evolutionary biology of this prominent disease vector. These findings represent an important advancement in the understanding of the characteristics of the populations of northeastern Brazil and provide valuable insights into the taxonomy and evolutionary biology of this prominent disease vector.
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Affiliation(s)
- Andrelina Alves de Sousa
- Post-Graduate Program in Genetics and Molecular Biology, Federal University of Pará, Belém 66075-110, Pará, Brazil;
| | - Ana Cecília Ribeiro Cruz
- Evandro Chagas Institute (IEC/SVS/MS), Department of Arbovirology and Hemorrhagic Fevers, Ananindeua 67030-000, Pará, Brazil; (A.C.R.C.); (F.S.d.S.); (S.P.d.S.); (J.P.N.N.)
- Post-Graduate Program in Parasite Biology in the Amazon, Center of Biological and Health Sciences, Pará State University, Belém 66095-662, Pará, Brazil
| | - Fábio Silva da Silva
- Evandro Chagas Institute (IEC/SVS/MS), Department of Arbovirology and Hemorrhagic Fevers, Ananindeua 67030-000, Pará, Brazil; (A.C.R.C.); (F.S.d.S.); (S.P.d.S.); (J.P.N.N.)
- Post-Graduate Program in Parasite Biology in the Amazon, Center of Biological and Health Sciences, Pará State University, Belém 66095-662, Pará, Brazil
| | - Sandro Patroca da Silva
- Evandro Chagas Institute (IEC/SVS/MS), Department of Arbovirology and Hemorrhagic Fevers, Ananindeua 67030-000, Pará, Brazil; (A.C.R.C.); (F.S.d.S.); (S.P.d.S.); (J.P.N.N.)
| | - Joaquim Pinto Nunes Neto
- Evandro Chagas Institute (IEC/SVS/MS), Department of Arbovirology and Hemorrhagic Fevers, Ananindeua 67030-000, Pará, Brazil; (A.C.R.C.); (F.S.d.S.); (S.P.d.S.); (J.P.N.N.)
- Post-Graduate Program in Parasite Biology in the Amazon, Center of Biological and Health Sciences, Pará State University, Belém 66095-662, Pará, Brazil
| | - Maria Claudene Barros
- Laboratory of Genetics and Molecular Biology (GENBIMOL), Maranhão State University, Caxias 65604-380, Maranhão, Brazil; (M.C.B.); (E.d.C.F.)
| | - Elmary da Costa Fraga
- Laboratory of Genetics and Molecular Biology (GENBIMOL), Maranhão State University, Caxias 65604-380, Maranhão, Brazil; (M.C.B.); (E.d.C.F.)
| | - Iracilda Sampaio
- Laboratory of Evolution, Institute of Coastal Studies, Federal University of Pará, Bragança 68600-000, Pará, Brazil
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Harbach RE, Wilkerson RC. The insupportable validity of mosquito subspecies (Diptera: Culicidae) and their exclusion from culicid classification. Zootaxa 2023; 5303:1-184. [PMID: 37518540 DOI: 10.11646/zootaxa.5303.1.1] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Indexed: 08/01/2023]
Abstract
Beginning about 80 years ago, the recognition of morphological varieties of mosquitoes was gradually replaced by the recognition of subspecies. As an examination of revisionary and detailed taxonomic studies of mosquitoes clearly shows, subspecies are untenable concepts which have been synonymized with nominotypical forms or recognized as distinct species. Thus, from our perspective, subspecies is not a functional or practical taxonomic rank. Consequently, in this study we critically assessed the taxonomic status of the 120 nominal taxa distinguished as subspecies before now to determine whether they should be recognized as separate species or synonymous names. As a result, 96 subspecies are formally elevated to specific rank, 22 are relegated to synonymy with nominotypical forms, one is considered a nomen dubium, one a species inquirenda and the names of four nominal species regarded as synonyms are revalidated. The subspecies and their new status are listed in a conspectus. The revalidated species include Anopheles argentinus (Brèthes, 1912), from synonymy with An. pseudopunctipennis Theobald, 1901c; An. peruvianus Tamayo, 1907, from synonymy with An. pseudopunctipennis as nomen dubium; Culex major Edwards, 1935, from synonymy with Cx. annulioris consimilis Newstead, 1907; and Trichoprosopon trichorryes (Dyar & Knab, 1907), from synonymy with Tr. compressum Lutz, 1905. Additionally, the type locality of Anopheles sergentii Theobald, 1907 is restricted to El Outaya, Biskra Province, Algeria. A complete list of species to be retained, added to or removed from the Encyclopedia of Life, with a few corrections, is provided.
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Affiliation(s)
- Ralph E Harbach
- Department of Science; Natural History Museum; Cromwell Road; London SW7 5BD; UK.
| | - Richard C Wilkerson
- Department of Entomology; National Museum of Natural History; Smithsonian Institution; Washington DC 20013; USA; Walter Reed Biosystematics Unit; Museum Support Center; Smithsonian Institution; Suitland; MD 20746; USA; One Health Branch; Walter Reed Army Institute of Research; Silver Spring; MD 20910; USA.
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Abuelmaali SA, Jamaluddin JAF, Allam M, Abushama HM, Elnaiem DE, Noaman K, Avicor SW, Ishak IH, Wajidi MFF, Jaal Z, Abu Kassim NF. Genetic Polymorphism and Phylogenetics of Aedes aegypti from Sudan Based on ND4 Mitochondrial Gene Variations. INSECTS 2022; 13:1144. [PMID: 36555054 PMCID: PMC9785543 DOI: 10.3390/insects13121144] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/18/2022] [Revised: 11/18/2022] [Accepted: 11/30/2022] [Indexed: 06/17/2023]
Abstract
This study investigated the genetic differences between Aedes aegypti subspecies (Aedes aegypti aegypti (Aaa) and Aedes aegypti formosus (Aaf)) from Sudan using the NADH dehydrogenase subunit 4 (ND4) mitochondrial gene marker. Nineteen distinct haplotypes of the ND4 were identified in female Aedes aegypti mosquitoes from the study sites. The phylogenetic relationship of the 19 ND4 haplotypes was demonstrated in a median-joining haplotype network tree with Aaa and Aaf populations found to share three haplotypes. The genetic variance (Pairwise FST values) was estimated and found to range from 0.000 to 0.811. Isolation by distance test revealed that geographical distance was correlated to genetic variation (coefficient value (r) = 0.43). The Polar maximum likelihood tree showed the phylogenetic relationship of 91 female Aaa and Aaf from the study sites, with most of the Aaf haplotypes clustered in one group while most of the Aaa haplotypes gathered in another group, but there was an admixture of the subspecies in both clusters, especially the Aaa cluster. The Spatial Analysis of Molecular Variance (SAMOVA) test revealed that the eight populations clustered into two phylogeographic groups/clusters of the two subspecies populations. The 2 Aedes aegypti subspecies seemed not to be totally separated geographically with gene flow among the populations.
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Affiliation(s)
- Sara Abdelrahman Abuelmaali
- 129 Medical Entomology Laboratory, School of Biological Sciences, Universiti Sains Malaysia, Penang 11800, Malaysia
- National Public Health Laboratory, Federal Ministry of Health, Khartoum 11115, Sudan
| | | | - Mushal Allam
- College of Medicine and Health Sciences, United Arab Emirates University, P.O. Box 15551 Abu Dhabi, United Arab Emirates
| | - Hind Mohamed Abushama
- Department of Zoology, Faculty of Science, University of Khartoum, Khartoum 321, Sudan
| | - Dia Eldin Elnaiem
- Department of Natural Sciences, University of Maryland Eastern Shore, Maryland, MD 21853, USA
| | - Kheder Noaman
- National Center for Research, Tropical Medicine Research Institute, Khartoum 1304, Sudan
| | - Silas Wintuma Avicor
- Entomology Division, Cocoa Research Institute of Ghana, New Tafo-Akim P.O. Box 8, Ghana
| | - Intan Haslina Ishak
- 129 Medical Entomology Laboratory, School of Biological Sciences, Universiti Sains Malaysia, Penang 11800, Malaysia
| | | | - Zairi Jaal
- Vector Control Research Unit, School of Biological Sciences, Universiti Sains Malaysia, Penang 11800, Malaysia
| | - Nur Faeza Abu Kassim
- 129 Medical Entomology Laboratory, School of Biological Sciences, Universiti Sains Malaysia, Penang 11800, Malaysia
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Escobar D, Ortiz B, Urrutia O, Fontecha G. Genetic Diversity among Four Populations of Aedes aegypti (Diptera: Culicidae) from Honduras as Revealed by Mitochondrial DNA Cytochrome Oxidase I. Pathogens 2022; 11:pathogens11060620. [PMID: 35745474 PMCID: PMC9228569 DOI: 10.3390/pathogens11060620] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Revised: 05/23/2022] [Accepted: 05/24/2022] [Indexed: 02/05/2023] Open
Abstract
Aedes aegypti is a hematophagous and highly anthropophilic mosquito with a wide distribution, particularly in tropical and subtropical regions of the world. Ae. aegypti is the main vector of several febrile diseases called arboviruses (dengue, yellow fever, chikungunya, and zika viruses), which represent an important public health problem. Populations of this mosquito were nearly eliminated from the Americas in the mid-20th century; however, after the abandonment of control measures, mosquito populations have been recovering territory, have expanded by anthropogenic mechanisms, and have been joined by new populations reintroduced from other continents. The objective of this pilot study was to determine the genetic variability of Aedes aegypti collected in four cities located along the so-called logistics corridor of Honduras, which connects the Caribbean Sea to the Pacific Ocean. We studied the sequences of two molecular markers: the cytochrome c oxidase 1 (COI mtDNA) gene and the internal transcribed spacer 2 (ITS2 rDNA) of 40 mosquitoes. Phylogenetic analyzes show two separate clades with a low number of nucleotide differences per site, three haplotypes, and low haplotype diversity. These results suggest a low genetic diversity in the populations of Ae. aegypti in Honduras in relation to that reported in other countries of the Central American isthmus.
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Affiliation(s)
- Denis Escobar
- Microbiology Research Institute, Universidad Nacional Autónoma de Honduras, Tegucigalpa 11101, Honduras; (D.E.); (B.O.)
| | - Bryan Ortiz
- Microbiology Research Institute, Universidad Nacional Autónoma de Honduras, Tegucigalpa 11101, Honduras; (D.E.); (B.O.)
| | - Oscar Urrutia
- Unidad de vigilancia de la salud, Secretaría de Salud de Honduras, Tegucigalpa 11101, Honduras;
| | - Gustavo Fontecha
- Microbiology Research Institute, Universidad Nacional Autónoma de Honduras, Tegucigalpa 11101, Honduras; (D.E.); (B.O.)
- Correspondence: ; Tel.: +504-33935443
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Elnour MAB, Gloria-Soria A, Azrag RS, Alkhaibari AM, Powell JR, Salim B. Population Genetic Analysis of Aedes aegypti Mosquitoes From Sudan Revealed Recent Independent Colonization Events by the Two Subspecies. Front Genet 2022; 13:825652. [PMID: 35251133 PMCID: PMC8889412 DOI: 10.3389/fgene.2022.825652] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Accepted: 01/12/2022] [Indexed: 11/13/2022] Open
Abstract
Increases in arbovirus outbreaks in Sudan are vectored by Aedes aegypti, raising the medical importance of this mosquito. We genotyped 12 microsatellite loci in four populations of Ae. aegypti from Sudan, two from the East and two from the West, and analyzed them together with a previously published database of 31 worldwide populations to infer population structure and investigate the demographic history of this species in Sudan. Our results revealed the presence of two genetically distinct subspecies of Ae. aegypti in Sudan. These are Ae. aegypti aegypti in Eastern Sudan and Ae. aegypti formosus in Western Sudan. Clustering analysis showed that mosquitoes from East Sudan are genetically homogeneous, while we found population substructure in West Sudan. In the global context our results indicate that Eastern Sudan populations are genetically closer to Asian and American populations, while Western Sudan populations are related to East and West African populations. Approximate Bayesian Computation Analysis supports a scenario in which Ae. aegypti entered Sudan in at least two independent occasions nearly 70–80 years ago. This study provides a baseline database that can be used to determine the likely origin of new introductions for this invasive species into Sudan. The presence of the two subspecies in the country should be consider when designing interventions, since they display different behaviors regarding epidemiologically relevant parameters, such as blood feeding preferences and ability to transmit disease.
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Affiliation(s)
- Mohammed-Ahmed B. Elnour
- Department of Parasitology and Medical Entomology, Tropical Medicine Research Institute, National Center for Research, Khartoum, Sudan
| | - Andrea Gloria-Soria
- Department of Environmental Sciences, Center for Vector Biology and Zoonotic Diseases, The Connecticut Agricultural Experiment Station, New Haven, CT, United States
- Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, United States
| | - Rasha S. Azrag
- Department of Zoology, Faculty of Science, University of Khartoum, Khartoum, Sudan
| | - Abeer M. Alkhaibari
- Department of Biology, Faculty of Science, University of Tabuk, Tabuk, Saudi Arabia
| | - Jeffrey R. Powell
- Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, United States
| | - Bashir Salim
- Department of Parasitology, Faculty of Veterinary Medicine, University of Khartoum, Khartoum North, Sudan
- *Correspondence: Bashir Salim,
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