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Khadiri M, Boubaker H, Laasli SE, Farhaoui A, Ezrari S, Radouane N, Radi M, Askarne L, Barka EA, Lahlali R. Unlocking Nature's Secrets: Molecular Insights into Postharvest Pathogens Impacting Moroccan Apples and Innovations in the Assessment of Storage Conditions. PLANTS (BASEL, SWITZERLAND) 2024; 13:553. [PMID: 38498518 PMCID: PMC10891559 DOI: 10.3390/plants13040553] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/21/2023] [Revised: 01/29/2024] [Accepted: 02/14/2024] [Indexed: 03/20/2024]
Abstract
Apple production holds a prominent position in Morocco's Rosaceae family. However, annual production can fluctuate due to substantial losses caused by fungal diseases affecting stored apples. Our findings emphasize that the pre-storage treatment of apples, disinfection of storage facilities, box type, and fruit sorting are pivotal factors affecting apple losses during storage. Additionally, the adopted preservation technique was significantly correlated with the percentage of damage caused by fungal infections. Blue mold accounts for nearly three-quarters of the diseases detected, followed by gray rot with a relatively significant incidence. This study has revealed several fungal diseases affecting stored apples caused by pathogens such as Penicillium expansum, Botrytis cinerea, Alternaria alternata, Trichothecium roseum, Fusarium avenaceum, Cadophora malorum, and Neofabraea vagabunda. Notably, these last two fungal species have been reported for the first time in Morocco as pathogens of stored apples. These data affirm that the high losses of apples in Morocco, attributed primarily to P. expansum and B. cinerea, pose a significant threat in terms of reduced production and diminished fruit quality. Hence, adopting controlled atmosphere storage chambers and implementing good practices before apple storage is crucial.
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Affiliation(s)
- Mohammed Khadiri
- Phytopathology Unit, Department of Plant Protection, Ecole Nationale d’Agriculture de Meknès, Km10, Rte Haj Kaddour, BP S/40, Meknès 50001, Morocco; (M.K.); (S.-E.L.); (A.F.)
- Laboratoire de Biotechnologies Microbiennes et Protection des Végétaux, Faculté des Sciences, Université Ibn Zhor, BP 8106, Agadir 80000, Morocco; (H.B.); (L.A.)
| | - Hassan Boubaker
- Laboratoire de Biotechnologies Microbiennes et Protection des Végétaux, Faculté des Sciences, Université Ibn Zhor, BP 8106, Agadir 80000, Morocco; (H.B.); (L.A.)
| | - Salah-Eddine Laasli
- Phytopathology Unit, Department of Plant Protection, Ecole Nationale d’Agriculture de Meknès, Km10, Rte Haj Kaddour, BP S/40, Meknès 50001, Morocco; (M.K.); (S.-E.L.); (A.F.)
| | - Abdelaaziz Farhaoui
- Phytopathology Unit, Department of Plant Protection, Ecole Nationale d’Agriculture de Meknès, Km10, Rte Haj Kaddour, BP S/40, Meknès 50001, Morocco; (M.K.); (S.-E.L.); (A.F.)
- Department of Biology, Laboratory of Biotechnology and Valorization of Bio-Resources (BioVaR), Faculty of Sciences, Moulay Ismail University, BP 11201, Zitoune, Meknes 50000, Morocco
| | - Said Ezrari
- Microbiology Unit, Laboratory of Bioresources, Biotechnology, Ethnopharmacology and Health, Faculty of Medicine and Pharmacy Oujda, University Mohammed Premier, Oujda 60000, Morocco
| | - Nabil Radouane
- African Genome Center, Mohammed VI Polytechnic University (UM6P), Ben Guerir 43150, Morocco;
| | - Mohammed Radi
- Phytopathology Unit, Department of Plant Protection, Ecole Nationale d’Agriculture de Meknès, Km10, Rte Haj Kaddour, BP S/40, Meknès 50001, Morocco; (M.K.); (S.-E.L.); (A.F.)
- Laboratory of Environment and Valorization of Microbial and Plant Resources, Faculty of Sciences, Moulay Ismail University, BP 11201, Zitoune, Meknes 50000, Morocco
| | - Latifa Askarne
- Laboratoire de Biotechnologies Microbiennes et Protection des Végétaux, Faculté des Sciences, Université Ibn Zhor, BP 8106, Agadir 80000, Morocco; (H.B.); (L.A.)
| | - Essaid Ait Barka
- Induced Resistance and Plant Biosection Research Unit-EA 4707-USC INRAE1488, Reims Cham-pagne-Ardenne University, 51687 Reims, France
| | - Rachid Lahlali
- Phytopathology Unit, Department of Plant Protection, Ecole Nationale d’Agriculture de Meknès, Km10, Rte Haj Kaddour, BP S/40, Meknès 50001, Morocco; (M.K.); (S.-E.L.); (A.F.)
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Senatore MT, Prodi A, Tini F, Balmas V, Infantino A, Onofri A, Cappelletti E, Oufensou S, Sulyok M, Covarelli L, Beccari G. Different diagnostic approaches for the characterization of the fungal community and Fusarium species complex composition of Italian durum wheat grain and correlation with secondary metabolite accumulation. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2023; 103:4503-4521. [PMID: 36828788 DOI: 10.1002/jsfa.12526] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Revised: 02/06/2023] [Accepted: 02/24/2023] [Indexed: 06/06/2023]
Abstract
BACKGROUND The evolution of the fungal communities associated with durum wheat was assessed using different diagnostic approaches. Durum wheat grain samples were collected in three different Italian cultivation macro-areas (north, center and south). Fungal isolation was realized by potato dextrose agar (PDA) and by deep-freezing blotter (DFB). Identification of Fusarium isolates obtained from PDA was achieved by partial tef1α sequencing (PDA + tef1α), while those obtained from DFB were identified from their morphological characteristics (DFB + mc). The fungal biomass of eight Fusarium species was quantified in grains by quantitative polymerase chain reaction (qPCR). Fungal secondary metabolites were analyzed in grains by liquid chromatography-tandem mass spectrometry (LC-MS/MS). Correlations between Fusarium detection techniques (PDA + tef1α; DFB + mc and qPCR) and mycotoxins in grains were assessed. RESULTS Alternaria and Fusarium showed the highest incidence among the fungal genera developed from grains. Within the Fusarium community, PDA + tef1α highlighted that F. avenaceum and F. graminearum were the most represented members, while, DFB + mc detected a high presence of F. proliferatum. Alternaria and Fusarium mycotoxins, principally enniatins, were particularly present in the grain harvested in central Italy. Deoxynivalenol was mainly detected in northern-central Italy. CONCLUSIONS The adoption of the different diagnostic techniques of Fusarium detection highlighted that, for some species, qPCR was the best method of predicting their mycotoxin contamination in grains. © 2023 The Authors. Journal of The Science of Food and Agriculture published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
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Affiliation(s)
- Maria Teresa Senatore
- Department of Agricultural and Food Sciences, Alma Mater Studiorum University of Bologna, Bologna, Italy
| | - Antonio Prodi
- Department of Agricultural and Food Sciences, Alma Mater Studiorum University of Bologna, Bologna, Italy
| | - Francesco Tini
- Department of Agricultural, Food and Environmental Sciences, University of Perugia, Perugia, Italy
| | - Virgilio Balmas
- Department of Agriculture, University of Sassari, Sassari, Italy
| | - Alessandro Infantino
- Council for Agricultural Research and Economics (CREA), Research Centre for Plant Protection and Certification, Rome, Italy
| | - Andrea Onofri
- Department of Agricultural, Food and Environmental Sciences, University of Perugia, Perugia, Italy
| | - Eleonora Cappelletti
- Department of Agricultural and Food Sciences, Alma Mater Studiorum University of Bologna, Bologna, Italy
| | - Safa Oufensou
- Department of Agriculture, University of Sassari, Sassari, Italy
| | - Michael Sulyok
- University of Natural Resources and Life Sciences, Vienna, Department of Agrobiotechnology (IFA-Tulln), Institute of Bionalytics and Agro-Metabolomics, Tulln, Austria
| | - Lorenzo Covarelli
- Department of Agricultural, Food and Environmental Sciences, University of Perugia, Perugia, Italy
| | - Giovanni Beccari
- Department of Agricultural, Food and Environmental Sciences, University of Perugia, Perugia, Italy
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Gavrilova OP, Gagkaeva TY, Orina AS, Gogina NN. Diversity of Fusarium Species and Their Mycotoxins in Cereal Crops from the Asian Territory of Russia. DOKLADY BIOLOGICAL SCIENCES : PROCEEDINGS OF THE ACADEMY OF SCIENCES OF THE USSR, BIOLOGICAL SCIENCES SECTIONS 2023; 508:9-19. [PMID: 37186044 DOI: 10.1134/s0012496622700156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Revised: 10/05/2022] [Accepted: 10/06/2022] [Indexed: 05/17/2023]
Abstract
Up-to-date information on the occurrence of Fusarium fungi and their mycotoxins in the grain of wheat, barley and oats grown in the Urals and West Siberia in 2018‒2019 is presented. Mycological analysis of grain revealed at least 16 species of Fusarium fungi. The F. sporotrichioides, F. avenaceum, F. poae, and F. anguioides were predominant, and the proportions of these species among all Fusarium fungi found in the grain were 31, 20, 19, and 13%, respectively. Fusarium graminearum and its mycotoxin deoxynivalenol (DON) are often occurred in grain mycobiota of cereal crops on the territory of both the Urals and West Siberia. New records of fungal species that are rare in the Asian territory of Russia were detected: F. langsethiae and F. sibiricum, which are mainly producers of type A trichothecene mycotoxins, were found in the Kurgan and Kemerovo regions, respectively. In addition, F. globosum that is able to produce fumonisins was detected in Altai Krai and Omsk region. The diversity of Fusarium species was higher in wheat and barley grain samples than in oats. The HPLC-MS/MS method was used to analyse the content of 19 mycotoxins produced by Fusarium fungi. The highest diversity of mycotoxins was found in wheat grain (maximum 12), compared with oats (9) and barley (8). The T-2 and HT-2 toxins, DON, nivalenol, moniliformin (MON) and beauvericin (BEA) occurred more often in the grain samples, compared with other mycotoxins, but their amounts varied significantly, depending on the weather conditions in sampling year and the plant species. The average content of DON (maximum amount was 375 µg/kg) in wheat grain was 5 times higher than its average content in barley grain, and this mycotoxin was not detected in oat grain. The contamination with T-2 and HT-toxins (maximum amounts were 2652 μg/kg and 481 μg/kg, respectively), as well as with BEA (maximum amount was 49 μg/kg) was typical for barley and oat grain samples. The content of MON (maximum amount was 50 μg/kg) in the grain of three different small grain cereals was similar.
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Affiliation(s)
- O P Gavrilova
- All-Russian Institute of Plant Protection, St. Petersburg, Russia.
| | - T Yu Gagkaeva
- All-Russian Institute of Plant Protection, St. Petersburg, Russia.
| | - A S Orina
- All-Russian Institute of Plant Protection, St. Petersburg, Russia
| | - N N Gogina
- All-Russian Research and Technological Poultry Institute, Sergiev Posad, Moscow oblast, Russia
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Quantifying the Role of Ground Beetles for the Dispersal of Fusarium and Alternaria Fungi in Agricultural Landscapes. J Fungi (Basel) 2021; 7:jof7100863. [PMID: 34682284 PMCID: PMC8537540 DOI: 10.3390/jof7100863] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Revised: 10/06/2021] [Accepted: 10/07/2021] [Indexed: 12/13/2022] Open
Abstract
The spread by arthropods (zoochory) is an essential dispersal mechanism for many microorganisms, like plant pathogens. Carabid beetles are very abundant and mobile ground-dwelling insects. However, their role in the dispersal of economically relevant phytopathogens, like Fusarium and Alternaria fungi is basically unknown. We quantified the total fungal, Fusarium, and Alternaria load of carabid species collected in the transition zones between small water bodies and wheat fields by screening (i) their body surface for fungal propagules with a culture-dependent method and (ii) their entire bodies for fungal DNA with a qPCR approach. The analysis of entire bodies detects fungal DNA in all carabid beetles but Alternaria DNA in 98% of them. We found that 74% of the carabids carried fungal propagules on the body surface, of which only half (49%) carried Fusarium propagules. We identified eight Fusarium and four Alternaria species on the body surface; F. culmorum was dominant. The fungal, Fusarium and Alternaria, load differed significantly between the carabid species and was positively affected by the body size and weight of the carabids. Carabid beetles reveal a remarkable potential to disseminate different fungi. Dispersal by ground-dwelling arthropods could affect the spatial-temporal patterns of plant disease and microorganisms in general.
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Senatore MT, Ward TJ, Cappelletti E, Beccari G, McCormick SP, Busman M, Laraba I, O'Donnell K, Prodi A. Species diversity and mycotoxin production by members of the Fusarium tricinctum species complex associated with Fusarium head blight of wheat and barley in Italy. Int J Food Microbiol 2021; 358:109298. [PMID: 34210546 DOI: 10.1016/j.ijfoodmicro.2021.109298] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Revised: 05/26/2021] [Accepted: 06/05/2021] [Indexed: 11/29/2022]
Abstract
Fusarium head blight (FHB) is a global cereal disease caused by a complex of Fusarium species. In Europe, the main species responsible for FHB are F. graminearum, F. culmorum and F. poae. However, members of the F. tricinctum species complex (FTSC) have become increasingly important. FTSC fusaria can synthesize mycotoxins such as moniliformin (MON), enniatins (ENNs) and several other biologically active secondary metabolites that could compromise food quality. In this study, FTSC isolates primarily from Italian durum wheat and barley, together with individual strains from four non-graminaceous hosts, were collected to assess their genetic diversity and determine their potential to produce mycotoxins in vitro on rice cultures. A multilocus DNA sequence dataset (TEF1, RPB1 and RPB2) was constructed for 117 isolates from Italy and 6 from Iran to evaluate FTSC species diversity and their evolutionary relationships. Phylogenetic analyses revealed wide genetic diversity among Italian FTSC isolates. Among previously described FTSC species, F. avenaceum (FTSC 4) was the most common species in Italy (56/117 = 47.9%) while F. tricinctum (FTSC 3), and F. acuminatum (FTSC 2) accounted for 11.1% (13/117) and the 8.5% (10/117), respectively. The second most detected species was a new and unnamed Fusarium sp. (FTSC 12; 32/117 = 19%) resolved as the sister group of F. tricinctum. Collectively, these four phylospecies accounted for 111/117 = 94.9% of the Italian FTSC collection. However, we identified five other FTSC species at low frequencies, including F. iranicum (FTSC 6) and three newly discovered species (Fusarium spp. FTSC 13, 14, 15). Of the 59 FTSC isolates tested for mycotoxin production on rice cultures, 54 and 55 strains, respectively, were able to produce detectable levels of ENNs and MON. In addition, we confirmed that the ability to produce bioactive secondary metabolites such as chlamydosporol, acuminatopyrone, longiborneol, fungerin and butanolide is widespread across the FTSC.
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Affiliation(s)
- M T Senatore
- Department of Agricultural and Food Sciences, Alma Mater Studiorum University of Bologna, Viale G. Fanin, 44, 40127 Bologna, Italy
| | - T J Ward
- US Department of Agriculture, Agricultural Research Service, National Center for Agricultural Utilization Research, Mycotoxin Prevention and Applied Microbiology Research Unit, 1815 North University Street, Peoria, IL 60604-3999, USA
| | - E Cappelletti
- Department of Agricultural and Food Sciences, Alma Mater Studiorum University of Bologna, Viale G. Fanin, 44, 40127 Bologna, Italy
| | - G Beccari
- Department of Agricultural, Food and Environmental Sciences, University of Perugia, Borgo XX Giugno, 74, 06121 Perugia, Italy
| | - S P McCormick
- US Department of Agriculture, Agricultural Research Service, National Center for Agricultural Utilization Research, Mycotoxin Prevention and Applied Microbiology Research Unit, 1815 North University Street, Peoria, IL 60604-3999, USA
| | - M Busman
- US Department of Agriculture, Agricultural Research Service, National Center for Agricultural Utilization Research, Mycotoxin Prevention and Applied Microbiology Research Unit, 1815 North University Street, Peoria, IL 60604-3999, USA
| | - I Laraba
- US Department of Agriculture, Agricultural Research Service, National Center for Agricultural Utilization Research, Mycotoxin Prevention and Applied Microbiology Research Unit, 1815 North University Street, Peoria, IL 60604-3999, USA
| | - K O'Donnell
- US Department of Agriculture, Agricultural Research Service, National Center for Agricultural Utilization Research, Mycotoxin Prevention and Applied Microbiology Research Unit, 1815 North University Street, Peoria, IL 60604-3999, USA
| | - A Prodi
- Department of Agricultural and Food Sciences, Alma Mater Studiorum University of Bologna, Viale G. Fanin, 44, 40127 Bologna, Italy.
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