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For: Yurkov AP, Puzanskiy RK, Avdeeva GS, Jacobi LM, Gorbunova AO, Kryukov AA, Kozhemyakov AP, Laktionov YV, Kosulnikov YV, Romanyuk DA, Yemelyanov VV, Shavarda AL, Kirpichnikova AA, Smolikova GN, Shishova MF. Mycorrhiza-Induced Alterations in Metabolome of Medicago lupulina Leaves during Symbiosis Development. Plants 2021;10:2506. [PMID: 34834870 PMCID: PMC8617643 DOI: 10.3390/plants10112506] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/16/2021] [Revised: 10/12/2021] [Accepted: 10/22/2021] [Indexed: 01/12/2023]

For:	Yurkov AP, Puzanskiy RK, Avdeeva GS, Jacobi LM, Gorbunova AO, Kryukov AA, Kozhemyakov AP, Laktionov YV, Kosulnikov YV, Romanyuk DA, Yemelyanov VV, Shavarda AL, Kirpichnikova AA, Smolikova GN, Shishova MF. Mycorrhiza-Induced Alterations in Metabolome of Medicago lupulina Leaves during Symbiosis Development. Plants 2021;10:2506. [PMID: 34834870 PMCID: PMC8617643 DOI: 10.3390/plants10112506] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/16/2021] [Revised: 10/12/2021] [Accepted: 10/22/2021] [Indexed: 01/12/2023]

Number

Cited by Other Article(s)

Puzanskiy RK, Romanyuk DA, Kirpichnikova AA, Yemelyanov VV, Shishova MF. Plant Heterotrophic Cultures: No Food, No Growth. PLANTS (BASEL, SWITZERLAND) 2024;13:277. [PMID: 38256830 PMCID: PMC10821431 DOI: 10.3390/plants13020277] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2023] [Revised: 01/10/2024] [Accepted: 01/15/2024] [Indexed: 01/24/2024]

Yurkov AP, Afonin AM, Kryukov AA, Gorbunova AO, Kudryashova TR, Kovalchuk AI, Gorenkova AI, Bogdanova EM, Kosulnikov YV, Laktionov YV, Kozhemyakov AP, Romanyuk DA, Zhukov VA, Puzanskiy RK, Mikhailova YV, Yemelyanov VV, Shishova MF. The Effects of Rhizophagus irregularis Inoculation on Transcriptome of Medicago lupulina Leaves at Early Vegetative and Flowering Stages of Plant Development. PLANTS (BASEL, SWITZERLAND) 2023;12:3580. [PMID: 37896043 PMCID: PMC10610208 DOI: 10.3390/plants12203580] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2023] [Revised: 10/02/2023] [Accepted: 10/13/2023] [Indexed: 10/29/2023]

Abstract

The study is aimed at revealing the effects of Rhizophagus irregularis inoculation on the transcriptome of Medicago lupulina leaves at the early (second leaf formation) and later (flowering) stages of plant development. A pot experiment was conducted under conditions of low phosphorus (P) level in the substrate. M. lupulina plants were characterized by high mycorrhizal growth response and mycorrhization parameters. Library sequencing was performed on the Illumina HiseqXTen platform. Significant changes in the expression of 4863 (padj < 0.01) genes from 34049 functionally annotated genes were shown by Massive Analysis of cDNA Ends (MACE-Seq). GO enrichment analysis using the Kolmogorov-Smirnov test was performed, and 244 functional GO groups were identified, including genes contributing to the development of effective AM symbiosis. The Mercator online tool was used to assign functional classes of differentially expressed genes (DEGs). The early stage was characterized by the presence of six functional classes that included only upregulated GO groups, such as genes of carbohydrate metabolism, cellular respiration, nutrient uptake, photosynthesis, protein biosynthesis, and solute transport. At the later stage (flowering), the number of stimulated GO groups was reduced to photosynthesis and protein biosynthesis. All DEGs of the GO:0016036 group were downregulated because AM plants had higher resistance to phosphate starvation. For the first time, the upregulation of genes encoding thioredoxin in AM plant leaves was shown. It was supposed to reduce ROS level and thus, consequently, enhance the mechanisms of antioxidant protection in M. lupulina plants under conditions of low phosphorus level. Taken together, the obtained results indicate genes that are the most important for the effective symbiosis with M. lupulina and might be engaged in other plant species.

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Affiliation(s)

Andrey P. Yurkov Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
Alexey M. Afonin Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
Alexey A. Kryukov Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
Anastasia O. Gorbunova Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
Tatyana R. Kudryashova Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.) Graduate School of Biotechnology and Food Science, Peter the Great St. Petersburg Polytechnic University, St. Petersburg 194064, Russia
Anastasia I. Kovalchuk Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.) Graduate School of Biotechnology and Food Science, Peter the Great St. Petersburg Polytechnic University, St. Petersburg 194064, Russia
Anastasia I. Gorenkova Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.) Faculty of Biology, St. Petersburg State University, St. Petersburg 199034, Russia; (R.K.P.); (V.V.Y.); (M.F.S.)
Ekaterina M. Bogdanova Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.) Faculty of Biology, St. Petersburg State University, St. Petersburg 199034, Russia; (R.K.P.); (V.V.Y.); (M.F.S.)
Yuri V. Kosulnikov Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
Yuri V. Laktionov Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
Andrey P. Kozhemyakov Laboratory of Ecology of Symbiotic and Associative Rhizobacteria, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (A.M.A.); (A.A.K.); (A.O.G.); (T.R.K.); (A.I.K.); (A.I.G.); (E.M.B.); (Y.V.K.); (Y.V.L.); (A.P.K.)
Daria A. Romanyuk Laboratory of Genetics of Plant-Microbe Interactions, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (D.A.R.); (V.A.Z.)
Vladimir A. Zhukov Laboratory of Genetics of Plant-Microbe Interactions, All-Russia Research Institute for Agricultural Microbiology, Pushkin, St. Petersburg 196608, Russia; (D.A.R.); (V.A.Z.)
Roman K. Puzanskiy Faculty of Biology, St. Petersburg State University, St. Petersburg 199034, Russia; (R.K.P.); (V.V.Y.); (M.F.S.) Laboratory of Analytical Phytochemistry, Komarov Botanical Institute of the Russian Academy of Sciences, St. Petersburg 197022, Russia
Yulia V. Mikhailova Laboratory of Biosystematics and Cytology, Komarov Botanical Institute of the Russian Academy of Sciences, St. Petersburg 197022, Russia;
Vladislav V. Yemelyanov Faculty of Biology, St. Petersburg State University, St. Petersburg 199034, Russia; (R.K.P.); (V.V.Y.); (M.F.S.)
Maria F. Shishova Faculty of Biology, St. Petersburg State University, St. Petersburg 199034, Russia; (R.K.P.); (V.V.Y.); (M.F.S.)

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Kryukov AA, Gorbunova AO, Kudriashova TR, Ivanchenko OB, Shishova MF, Yurkov AP. SWEET transporters of Medicago lupulina in the arbuscular-mycorrhizal system in the presence of medium level of available phosphorus. Vavilovskii Zhurnal Genet Selektsii 2023;27:189-196. [PMID: 37293443 PMCID: PMC10244586 DOI: 10.18699/vjgb-23-25] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Revised: 12/01/2022] [Accepted: 12/01/2022] [Indexed: 06/10/2023] Open

Abstract

Arbuscular mycorrhiza (AM) fungi receive photosynthetic products and sugars from plants in exchange for contributing to the uptake of minerals, especially phosphorus, from the soil. The identification of genes controlling AM symbiotic efficiency may have practical application in the creation of highly productive plant-microbe systems. The aim of our work was to evaluate the expression levels of SWEET sugar transporter genes, the only family in which sugar transporters specific to AM symbiosis can be detected. We have selected a unique "host plant-AM fungus" model system with high response to mycorrhization under medium phosphorus level. This includes a plant line which is highly responsive to inoculation by AM fungi, an ecologically obligate mycotrophic line MlS-1 from black medick (Medicago lupulina) and the AM fungus Rhizophagus irregularis strain RCAM00320, which has a high efficiency in a number of plant species. Using the selected model system, differences in the expression levels of 11 genes encoding SWEET transporters in the roots of the host plant were evaluated during the development of or in the absence of symbiosis of M. lupulina with R. irregularis at various stages of the host plant development in the presence of medium level of phosphorus available for plant nutrition in the substrate. At most stages of host plant development, mycorrhizal plants had higher expression levels of MlSWEET1b, MlSWEET3c, MlSWEET12 and MlSWEET13 compared to AM-less controls. Also, increased expression relative to control during mycorrhization was observed for MlSWEET11 at 2nd and 3rd leaf development stages, for MlSWEET15c at stemming (stooling) stage, for MlSWEET1a at 2nd leaf development, stemming and lateral branching stages. The MlSWEET1b gene can be confidently considered a good marker with specific expression for effective development of AM symbiosis between M. lupulina and R. irregularis in the presence of medium level of phosphorus available to plants in the substrate.

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The Role of Medicago lupulina Interaction with Rhizophagus irregularis in the Determination of Root Metabolome at Early Stages of AM Symbiosis. PLANTS 2022;11:plants11182338. [PMID: 36145739 PMCID: PMC9501341 DOI: 10.3390/plants11182338] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Revised: 08/25/2022] [Accepted: 09/03/2022] [Indexed: 11/30/2022]