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Jamil M, Alagoz Y, Wang JY, Chen GTE, Berqdar L, Kharbatia NM, Moreno JC, Kuijer HNJ, Al-Babili S. Abscisic acid inhibits germination of Striga seeds and is released by them likely as a rhizospheric signal supporting host infestation. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024; 117:1305-1316. [PMID: 38169533 DOI: 10.1111/tpj.16610] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 11/29/2023] [Accepted: 12/15/2023] [Indexed: 01/05/2024]
Abstract
Seeds of the root parasitic plant Striga hermonthica undergo a conditioning process under humid and warm environments before germinating in response to host-released stimulants, particularly strigolactones (SLs). The plant hormone abscisic acid (ABA) regulates different growth and developmental processes, and stress response; however, its role during Striga seed germination and early interactions with host plants is under-investigated. Here, we show that ABA inhibited Striga seed germination and that hindering its biosynthesis induced conditioning and germination in unconditioned seeds, which was significantly enhanced by treatment with the SL analog rac-GR24. However, the inhibitory effect of ABA remarkably decreased during conditioning, confirming the loss of sensitivity towards ABA in later developmental stages. ABA measurement showed a substantial reduction of its content during the early conditioning stage and a significant increase upon rac-GR24-triggered germination. We observed this increase also in released seed exudates, which was further confirmed by using the Arabidopsis ABA-reporter GUS marker line. Seed exudates of germinated seeds, containing elevated levels of ABA, impaired the germination of surrounding Striga seeds in vitro and promoted root growth of a rice host towards germinated Striga seeds. Application of ABA as a positive control caused similar effects, indicating its function in Striga/Striga and Striga/host communications. In summary, we show that ABA is an essential player during seed dormancy and germination processes in Striga and acts as a rhizospheric signal likely to support host infestation.
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Affiliation(s)
- Muhammad Jamil
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Yagiz Alagoz
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Jian You Wang
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Guan-Ting Erica Chen
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
- Plant Science Program, Biological and Environmental Science and Engineering (BESE) Division, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Saudi Arabia
| | - Lamis Berqdar
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Najeh M Kharbatia
- Analytical Chemistry Core Lab, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Saudi Arabia
| | - Juan C Moreno
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Hendrik N J Kuijer
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Salim Al-Babili
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
- Plant Science Program, Biological and Environmental Science and Engineering (BESE) Division, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Saudi Arabia
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Boyno G, Rezaee Danesh Y, Demir S, Teniz N, Mulet JM, Porcel R. The Complex Interplay between Arbuscular Mycorrhizal Fungi and Strigolactone: Mechanisms, Sinergies, Applications and Future Directions. Int J Mol Sci 2023; 24:16774. [PMID: 38069097 PMCID: PMC10706366 DOI: 10.3390/ijms242316774] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 11/23/2023] [Accepted: 11/24/2023] [Indexed: 12/18/2023] Open
Abstract
Plants, the cornerstone of life on Earth, are constantly struggling with a number of challenges arising from both biotic and abiotic stressors. To overcome these adverse factors, plants have evolved complex defense mechanisms involving both a number of cell signaling pathways and a complex network of interactions with microorganisms. Among these interactions, the relationship between symbiotic arbuscular mycorrhizal fungi (AMF) and strigolactones (SLs) stands as an important interplay that has a significant impact on increased resistance to environmental stresses and improved nutrient uptake and the subsequent enhanced plant growth. AMF establishes mutualistic partnerships with plants by colonizing root systems, and offers a range of benefits, such as increased nutrient absorption, improved water uptake and increased resistance to both biotic and abiotic stresses. SLs play a fundamental role in shaping root architecture, promoting the growth of lateral roots and regulating plant defense responses. AMF can promote the production and release of SLs by plants, which in turn promote symbiotic interactions due to their role as signaling molecules with the ability to attract beneficial microbes. The complete knowledge of this synergy has the potential to develop applications to optimize agricultural practices, improve nutrient use efficiency and ultimately increase crop yields. This review explores the roles played by AMF and SLs in plant development and stress tolerance, highlighting their individual contributions and the synergistic nature of their interaction.
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Affiliation(s)
- Gökhan Boyno
- Department of Plant Protection, Faculty of Agriculture, Van Yuzuncu Yil University, Van 65090, Türkiye
| | - Younes Rezaee Danesh
- Department of Plant Protection, Faculty of Agriculture, Van Yuzuncu Yil University, Van 65090, Türkiye
- Department of Plant Protection, Faculty of Agriculture, Urmia University, Urmia 5756151818, Iran
| | - Semra Demir
- Department of Plant Protection, Faculty of Agriculture, Van Yuzuncu Yil University, Van 65090, Türkiye
| | - Necmettin Teniz
- Department of Agricultural Biotechnology, Faculty of Agriculture, Van Yuzuncu Yil University, Van 65090, Türkiye
| | - José M. Mulet
- Instituto de Biología Molecular y Celular de Plantas, Universitat Politècnica de València-Consejo Superior de Investigaciones Científicas, 46022 Valencia, Spain
| | - Rosa Porcel
- Instituto de Biología Molecular y Celular de Plantas, Universitat Politècnica de València-Consejo Superior de Investigaciones Científicas, 46022 Valencia, Spain
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Wang JY, Jamil M, AlOtaibi TS, Abdelaziz ME, Ota T, Ibrahim OH, Berqdar L, Asami T, Ahmed Mousa MA, Al-Babili S. Zaxinone mimics (MiZax) efficiently promote growth and production of potato and strawberry plants under desert climate conditions. Sci Rep 2023; 13:17438. [PMID: 37838798 PMCID: PMC10576822 DOI: 10.1038/s41598-023-42478-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2023] [Accepted: 09/11/2023] [Indexed: 10/16/2023] Open
Abstract
Climate changes and the rapid expanding human population have become critical concerns for global food security. One of the promising solutions is the employment of plant growth regulators (PGRs) for increasing crop yield and overcoming adverse growth conditions, such as desert climate. Recently, the apocarotenoid zaxinone and its two mimics (MiZax3 and MiZax5) have shown a promising growth-promoting activity in cereals and vegetable crops under greenhouse and field conditions. Herein, we further investigated the effect of MiZax3 and MiZax5, at different concentrations (5 and 10 µM in 2021; 2.5 and 5 µM in 2022), on the growth and yield of the two valuable vegetable crops, potato and strawberry, in the Kingdom of Saudi of Arabia. Application of both MiZax significantly increased plant agronomic traits, yield components and total yield, in five independent field trials from 2021 to 2022. Remarkably, the amount of applied MiZax was far less than humic acid, a widely applied commercial compound used here for comparison. Hence, our results indicate that MiZax are very promising PGRs that can be applied to promote the growth and yield of vegetable crops even under desert conditions and at relatively low concentrations.
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Affiliation(s)
- Jian You Wang
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Jeddah, Saudi Arabia
| | - Muhammad Jamil
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Jeddah, Saudi Arabia
| | - Turki S AlOtaibi
- Department of Agriculture, Faculty of Environmental Sciences, King Abdulaziz University (KAU), 21589, Jeddah, Saudi Arabia
| | - Mohamed E Abdelaziz
- Department of Vegetable Crops, Faculty of Agriculture, Cairo University, Giza, 12613, Egypt
- The National Research and Development Center for Sustainable Agriculture (Estidamah), Riyadh, Kingdom of Saudi Arabia
| | - Tsuyoshi Ota
- Applied Biological Chemistry, The University of Tokyo, Tokyo, Japan
| | - Omer H Ibrahim
- Department of Agriculture, Faculty of Environmental Sciences, King Abdulaziz University (KAU), 21589, Jeddah, Saudi Arabia
- Department of Ornamental Crops, Faculty of Agriculture, Assiut University, Assiut, 71526, Egypt
| | - Lamis Berqdar
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Jeddah, Saudi Arabia
| | - Tadao Asami
- Applied Biological Chemistry, The University of Tokyo, Tokyo, Japan
| | - Magdi Ali Ahmed Mousa
- Department of Agriculture, Faculty of Environmental Sciences, King Abdulaziz University (KAU), 21589, Jeddah, Saudi Arabia
- Department of Vegetable Crops, Faculty of Agriculture, Assiut University, Assiut, 71526, Egypt
| | - Salim Al-Babili
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Jeddah, Saudi Arabia.
- Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Jeddah, Saudi Arabia.
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Kang Z, Yan Y, Lu R, Dong X, Xu J, Zheng D, Li S, Gao Q, Liu S. Synthesis and Biological Profiling of Novel Strigolactone Derivatives for Arabidopsis Growth and Development. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023; 71:12859-12874. [PMID: 37602432 DOI: 10.1021/acs.jafc.3c02135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/22/2023]
Abstract
The artificially synthesized strigolactone (SL) analogue GR24 is currently the most widely used reference compound in studying the biological functions of SLs. To elucidate the structure-activity relationship and find more promising derivatives with unique molecular profiles, we design and synthesized three series of novel GR24 derivatives and explored their activities in hypocotyl and root development of Arabidopsis. Among the 50 synthesized compounds, A11a, A12a, and A20d were found to have high activities comparable to GR24 for hypocotyl and/or primary root elongation inhibition in Arabidopsis. Some new analogues have been discovered to exhibit unique activities: (1) A20c, A21e, and A21o are specific inhibitors in primary root elongation; (2) A21c, A26c, and A27a exhibit a high promotion effect on Arabidopsis primary root elongation; and (3) A27e possesses the most unique profiles completely opposite to GR24 that promotes both hypocotyl elongation and primary root development. Moreover, we revealed that the AtD14 receptor does not affect the inhibitory effect of SL analogues in Arabidopsis root development. The ligand-receptor interactions for the most representative analogues A11a and A27e were deciphered with a long time scale molecular dynamics simulation study, which provides the molecular basis of their distinct functions, and may help scientists design novel phytohormones.
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Affiliation(s)
- Zhaoyong Kang
- School of Pharmaceutical Science and Technology, Institute of Molecular Plus, Frontiers Science Center for Synthetic Biology (Ministry of Education of China), Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, Tianjin University, 92 Weijin Road, Nankai District, Tianjin 300072, P. R. China
| | - Yujie Yan
- School of Pharmaceutical Science and Technology, Institute of Molecular Plus, Frontiers Science Center for Synthetic Biology (Ministry of Education of China), Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, Tianjin University, 92 Weijin Road, Nankai District, Tianjin 300072, P. R. China
| | - Ruirui Lu
- Shenzhen Key Laboratory of Agricultural Synthetic Biology, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518124, P. R. China
| | - Xiaoqi Dong
- School of Pharmaceutical Science and Technology, Institute of Molecular Plus, Frontiers Science Center for Synthetic Biology (Ministry of Education of China), Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, Tianjin University, 92 Weijin Road, Nankai District, Tianjin 300072, P. R. China
| | - Jun Xu
- School of Pharmaceutical Science and Technology, Institute of Molecular Plus, Frontiers Science Center for Synthetic Biology (Ministry of Education of China), Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, Tianjin University, 92 Weijin Road, Nankai District, Tianjin 300072, P. R. China
| | - Dong Zheng
- Shenzhen Key Laboratory of Agricultural Synthetic Biology, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518124, P. R. China
| | - Suhua Li
- Shenzhen Key Laboratory of Agricultural Synthetic Biology, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518124, P. R. China
| | - Qingzhi Gao
- School of Pharmaceutical Science and Technology, Institute of Molecular Plus, Frontiers Science Center for Synthetic Biology (Ministry of Education of China), Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, Tianjin University, 92 Weijin Road, Nankai District, Tianjin 300072, P. R. China
- Department of Biology, Gudui BioPharma Technology Inc., 5 Lanyuan Road, Huayuan Industrial Park, Tianjin 300384, P. R. China
| | - Shengnan Liu
- School of Pharmaceutical Science and Technology, Institute of Molecular Plus, Frontiers Science Center for Synthetic Biology (Ministry of Education of China), Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, Tianjin University, 92 Weijin Road, Nankai District, Tianjin 300072, P. R. China
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Jamil M, Lin PY, Berqdar L, Wang JY, Takahashi I, Ota T, Alhammad N, Chen GTE, Asami T, Al-Babili S. New Series of Zaxinone Mimics (MiZax) for Fundamental and Applied Research. Biomolecules 2023; 13:1206. [PMID: 37627271 PMCID: PMC10452442 DOI: 10.3390/biom13081206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 07/19/2023] [Accepted: 07/21/2023] [Indexed: 08/27/2023] Open
Abstract
The apocarotenoid zaxinone is a recently discovered regulatory metabolite required for proper rice growth and development. In addition, zaxinone and its two mimics (MiZax3 and MiZax5) were shown to have a remarkable growth-promoting activity on crops and a capability to reduce infestation by the root parasitic plant Striga through decreasing strigolactone (SL) production, suggesting their potential for application in agriculture and horticulture. In the present study, we developed a new series of MiZax via structural modification of the two potent zaxinone mimics (MiZax3 and MiZax5) and evaluated their effect on plant growth and Striga infestation. In general, the structural modifications to MiZax3 and MiZax5 did not additionally improve their overall performance but caused an increase in certain activities. In conclusion, MiZax5 and especially MiZax3 remain the likely most efficient zaxinone mimics for controlling Striga infestation.
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Affiliation(s)
- Muhammad Jamil
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia; (M.J.); (P.-Y.L.); (L.B.); (J.Y.W.); (N.A.); (G.-T.E.C.)
| | - Pei-Yu Lin
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia; (M.J.); (P.-Y.L.); (L.B.); (J.Y.W.); (N.A.); (G.-T.E.C.)
- Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia
| | - Lamis Berqdar
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia; (M.J.); (P.-Y.L.); (L.B.); (J.Y.W.); (N.A.); (G.-T.E.C.)
| | - Jian You Wang
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia; (M.J.); (P.-Y.L.); (L.B.); (J.Y.W.); (N.A.); (G.-T.E.C.)
| | - Ikuo Takahashi
- Applied Biological Chemistry, The University of Tokyo, Tokyo 113-8657, Japan; (I.T.); (T.O.); (T.A.)
| | - Tsuyoshi Ota
- Applied Biological Chemistry, The University of Tokyo, Tokyo 113-8657, Japan; (I.T.); (T.O.); (T.A.)
| | - Noor Alhammad
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia; (M.J.); (P.-Y.L.); (L.B.); (J.Y.W.); (N.A.); (G.-T.E.C.)
| | - Guan-Ting Erica Chen
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia; (M.J.); (P.-Y.L.); (L.B.); (J.Y.W.); (N.A.); (G.-T.E.C.)
- Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia
| | - Tadao Asami
- Applied Biological Chemistry, The University of Tokyo, Tokyo 113-8657, Japan; (I.T.); (T.O.); (T.A.)
| | - Salim Al-Babili
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia; (M.J.); (P.-Y.L.); (L.B.); (J.Y.W.); (N.A.); (G.-T.E.C.)
- Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia
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Ito S. Recent advances in the regulation of root parasitic weed damage by strigolactone-related chemicals. Biosci Biotechnol Biochem 2023; 87:247-255. [PMID: 36610999 DOI: 10.1093/bbb/zbac208] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2022] [Accepted: 12/08/2022] [Indexed: 12/24/2022]
Abstract
Root parasitic weeds such as Striga spp. and Orobanche spp. dramatically reduce the yields of important agricultural crops and cause economic losses of over billions of US dollars worldwide. One reason for the damage by root parasitic weeds is that they germinate after specifically recognizing the host cues, strigolactones (SLs). SLs were identified ˃50 years ago as germination stimulants for root parasitic weeds, and various studies have been conducted to control parasitic weeds using SLs and related chemicals. Recently, biochemical and molecular biological approaches have revealed the SL biosynthesis and SL receptors; using these findings, various SL-related chemicals have been developed. This review summarizes recent research on SLs and their related chemicals for controlling root parasitic weeds.
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Affiliation(s)
- Shinsaku Ito
- Department of Bioscience, Faculty of Life Sciences, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya, Tokyo, Japan
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The Strigolactone Pathway Is a Target for Modifying Crop Shoot Architecture and Yield. BIOLOGY 2023; 12:biology12010095. [PMID: 36671787 PMCID: PMC9855930 DOI: 10.3390/biology12010095] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 01/05/2023] [Accepted: 01/05/2023] [Indexed: 01/11/2023]
Abstract
Due to their sessile nature, plants have developed the ability to adapt their architecture in response to their environment. Branching is an integral component of plant architecture, where hormonal signals tightly regulate bud outgrowth. Strigolactones (SLs), being a novel class of phytohormone, are known to play a key role in branching decisions, where they act as a negative regulator of bud outgrowth. They can achieve this by modulating polar auxin transport to interrupt auxin canalisation, and independently of auxin by acting directly within buds by promoting the key branching inhibitor TEOSINTE BRANCHED1. Buds will grow out in optimal conditions; however, when conditions are sub-optimal, SL levels increase to restrict branching. This can be a problem in agricultural applications, as reductions in branching can have deleterious effects on crop yield. Variations in promoter elements of key SL-related genes, such as IDEAL PLANT ARCHITECTURE1, have been identified to promote a phenotype with enhanced yield performance. In this review we highlight how this knowledge can be applied using new technologies to develop new genetic variants for improving crop shoot architecture and yield.
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Berestetskiy A. Modern Approaches for the Development of New Herbicides Based on Natural Compounds. PLANTS (BASEL, SWITZERLAND) 2023; 12:234. [PMID: 36678947 PMCID: PMC9864389 DOI: 10.3390/plants12020234] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Revised: 12/13/2022] [Accepted: 12/24/2022] [Indexed: 05/12/2023]
Abstract
Weeds are a permanent component of anthropogenic ecosystems. They require strict control to avoid the accumulation of their long-lasting seeds in the soil. With high crop infestation, many elements of crop production technologies (fertilization, productive varieties, growth stimulators, etc.) turn out to be practically meaningless due to high yield losses. Intensive use of chemical herbicides (CHs) has led to undesirable consequences: contamination of soil and wastewater, accumulation of their residues in the crop, and the emergence of CH-resistant populations of weeds. In this regard, the development of environmentally friendly CHs with new mechanisms of action is relevant. The natural phytotoxins of plant or microbial origin may be explored directly in herbicidal formulations (biorational CHs) or indirectly as scaffolds for nature-derived CHs. This review considers (1) the main current trends in the development of CHs that may be important for the enhancement of biorational herbicides; (2) the advances in the development and practical application of natural compounds for weed control; (3) the use of phytotoxins as prototypes of synthetic herbicides. Some modern approaches, such as computational methods of virtual screening and design of herbicidal molecules, development of modern formulations, and determination of molecular targets, are stressed as crucial to make the exploration of natural compounds more effective.
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Affiliation(s)
- Alexander Berestetskiy
- Laboratory of Phytotoxicology and Biotechnology, All-Russian Institute of Plant Protection, Pushkin, 196608 Saint-Petersburg, Russia
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Salem MA, Wang JY, Al-Babili S. Metabolomics of plant root exudates: From sample preparation to data analysis. FRONTIERS IN PLANT SCIENCE 2022; 13:1062982. [PMID: 36561464 PMCID: PMC9763704 DOI: 10.3389/fpls.2022.1062982] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Accepted: 11/21/2022] [Indexed: 06/17/2023]
Abstract
Plants release a set of chemical compounds, called exudates, into the rhizosphere, under normal conditions and in response to environmental stimuli and surrounding soil organisms. Plant root exudates play indispensable roles in inhibiting the growth of harmful microorganisms, while also promoting the growth of beneficial microbes and attracting symbiotic partners. Root exudates contain a complex array of primary and specialized metabolites. Some of these chemicals are only found in certain plant species for shaping the microbial community in the rhizosphere. Comprehensive understanding of plant root exudates has numerous applications from basic sciences to enhancing crop yield, production of stress-tolerant crops, and phytoremediation. This review summarizes the metabolomics workflow for determining the composition of root exudates, from sample preparation to data acquisition and analysis. We also discuss recent advances in the existing analytical methods and future perspectives of metabolite analysis.
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Affiliation(s)
- Mohamed A. Salem
- Department of Pharmacognosy and Natural Products, Faculty of Pharmacy, Menoufia University, Menoufia, Egypt
| | - Jian You Wang
- The BioActives Lab, Center for Desert Agriculture, Biological and Environment Science and Engineering (BESE), King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Salim Al-Babili
- The BioActives Lab, Center for Desert Agriculture, Biological and Environment Science and Engineering (BESE), King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia
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10
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Dor E, Goldwasser Y. “Parasitic Weeds: Biology and Control” Special Issue Editors Summary. PLANTS 2022; 11:plants11141891. [PMID: 35890525 PMCID: PMC9320372 DOI: 10.3390/plants11141891] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Accepted: 07/19/2022] [Indexed: 11/20/2022]
Affiliation(s)
- Evgenia Dor
- Institute of Plant Protection, Newe Ya’ar Research Center, Agricultural Research Organization, P.O. Box 1021, Ramat Yishay 30095, Israel
- Correspondence: (E.D.); (Y.G.)
| | - Yaakov Goldwasser
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, P.O. Box 12, Rehovot 76100, Israel
- Correspondence: (E.D.); (Y.G.)
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11
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Wang JY, Jamil M, Hossain MG, Chen GTE, Berqdar L, Ota T, Blilou I, Asami T, Al-Solimani SJ, Mousa MAA, Al-Babili S. Evaluation of the Biostimulant Activity of Zaxinone Mimics (MiZax) in Crop Plants. FRONTIERS IN PLANT SCIENCE 2022; 13:874858. [PMID: 35783933 PMCID: PMC9245435 DOI: 10.3389/fpls.2022.874858] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/13/2022] [Accepted: 05/02/2022] [Indexed: 06/15/2023]
Abstract
Global food security is a critical concern that needs practical solutions to feed the expanding human population. A promising approach is the employment of biostimulants to increase crop production. Biostimulants include compounds that boost plant growth. Recently, mimics of zaxinone (MiZax) were shown to have a promising growth-promoting effect in rice (Oryza sativa). In this study, we investigated the effect of MiZax on the growth and yield of three dicot horticultural plants, namely, tomato (Solanum lycopersicum), capsicum (Capsicum annuum), and squash (Cucurbita pepo) in different growth environments, as well as on the growth and development of the monocot date palm (Phoenix dactylifera), an important crop in the Middle East. The application of MiZax significantly enhanced plant height, flower, and branch numbers, fruit size, and total fruit yield in independent field trials from 2020 to 2021. Importantly, the amount of applied MiZax was far less than that used with the commercial compound humic acid, a widely used biostimulant in horticulture. Our results indicate that MiZax have significant application potential to improve the performance and productivity of horticultural crops.
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Affiliation(s)
- Jian You Wang
- The Bio Actives Lab, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Muhammad Jamil
- The Bio Actives Lab, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Md. Golap Hossain
- Department of Arid Land Agriculture, Faculty of Meteorology, Environment and Arid Land Agriculture, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Guan-Ting Erica Chen
- The Bio Actives Lab, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Lamis Berqdar
- The Bio Actives Lab, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Tsuyoshi Ota
- Applied Biological Chemistry, The University of Tokyo, Bunkyo City, Japan
| | - Ikram Blilou
- Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- The Laboratory of Plant Cell and Developmental Biology, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Tadao Asami
- Applied Biological Chemistry, The University of Tokyo, Bunkyo City, Japan
| | - Samir Jamil Al-Solimani
- Department of Arid Land Agriculture, Faculty of Meteorology, Environment and Arid Land Agriculture, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Magdi Ali Ahmed Mousa
- Department of Arid Land Agriculture, Faculty of Meteorology, Environment and Arid Land Agriculture, King Abdulaziz University, Jeddah, Saudi Arabia
- Department of Vegetables, Faculty of Agriculture, Assiut University, Assiut, Egypt
| | - Salim Al-Babili
- The Bio Actives Lab, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
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12
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Jamil M, Wang JY, Yonli D, Ota T, Berqdar L, Traore H, Margueritte O, Zwanenburg B, Asami T, Al-Babili S. Striga hermonthica Suicidal Germination Activity of Potent Strigolactone Analogs: Evaluation from Laboratory Bioassays to Field Trials. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11081045. [PMID: 35448773 PMCID: PMC9025746 DOI: 10.3390/plants11081045] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2022] [Revised: 04/04/2022] [Accepted: 04/11/2022] [Indexed: 05/04/2023]
Abstract
The obligate hemiparasite Striga hermonthica is one of the major global biotic threats to agriculture in sub-Saharan Africa, causing severe yield losses of cereals. The germination of Striga seeds relies on host-released signaling molecules, mainly strigolactones (SLs). This dependency opens up the possibility of deploying SL analogs as "suicidal germination agents" to reduce the accumulated seed bank of Striga in infested soils. Although several synthetic SL analogs have been developed for this purpose, the utility of these compounds in realizing the suicidal germination strategy for combating Striga is still largely unknown. Here, we evaluated the efficacy of three potent SL analogs (MP3, MP16, and Nijmegen-1) under laboratory, greenhouse, and farmer's field conditions. All investigated analogs showed around a 50% Striga germination rate, equivalent to a 50% reduction in infestation, which was comparable to the standard SL analog GR24. Importantly, MP16 had the maximum reduction of Striga emergence (97%) in the greenhouse experiment, while Nijmegen-1 appeared to be a promising candidate under field conditions, with a 43% and 60% reduction of Striga emergence in pearl millet and sorghum fields, respectively. These findings confirm that the selected SL analogs appear to make promising candidates as simple suicidal agents both under laboratory and real African field conditions, which may support us to improve suicidal germination technology to deplete the Striga seed bank in African agriculture.
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Affiliation(s)
- Muhammad Jamil
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia; (M.J.); (J.Y.W.); (L.B.)
| | - Jian You Wang
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia; (M.J.); (J.Y.W.); (L.B.)
| | - Djibril Yonli
- Institut de l’Environnement et de Recherches Agricoles (INERA), Ouagadougou 04 BP 8645, Burkina Faso; (D.Y.); (H.T.); (O.M.)
| | - Tsuyoshi Ota
- Applied Biological Chemistry, The University of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo 113-8657, Japan; (T.O.); (T.A.)
| | - Lamis Berqdar
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia; (M.J.); (J.Y.W.); (L.B.)
| | - Hamidou Traore
- Institut de l’Environnement et de Recherches Agricoles (INERA), Ouagadougou 04 BP 8645, Burkina Faso; (D.Y.); (H.T.); (O.M.)
| | - Ouedraogo Margueritte
- Institut de l’Environnement et de Recherches Agricoles (INERA), Ouagadougou 04 BP 8645, Burkina Faso; (D.Y.); (H.T.); (O.M.)
| | - Binne Zwanenburg
- Institute for Molecules and Materials, Radboud University, 6525 AJ Nijmegen, The Netherlands;
| | - Tadao Asami
- Applied Biological Chemistry, The University of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo 113-8657, Japan; (T.O.); (T.A.)
| | - Salim Al-Babili
- The BioActives Lab, Center for Desert Agriculture, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia; (M.J.); (J.Y.W.); (L.B.)
- Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia
- Correspondence:
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