1
|
Jütte L, Patel H, Roth B. Improved polarimetric analysis of human skin through stitching: advantages, limitations, and applications in dermatology. Biomed Phys Eng Express 2023; 10:015007. [PMID: 37988749 DOI: 10.1088/2057-1976/ad0e87] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Accepted: 11/21/2023] [Indexed: 11/23/2023]
Abstract
Polarimetry is a powerful tool for the analysis of the optical properties of materials and systems, such as human skin. However, in many polarimetric setups, the field of view is limited to a few square centimeters. In these cases, it is possible to resort to stitching techniques, which involve combining multiple Mueller matrix measurements obtained from different overlapping regions of the sample. In this paper, we propose a stitching technique for polarimetric data and discuss its advantages and limitations. We also describe the potential of image stitching for improving the accuracy and robustness ofin vivopolarimetry in the presence of random patient movement. We conducted our research using a diverse set of samples which included porcine skin, human skin from arms and fingers, cold cuts of chicken and gelatine, alongside synthetically created sample data. Our results demonstrate the effectiveness of this technique for the application in dermatology. Each additionalin vivomeasurement enhances the field of view by approximately one third, thereby considerably augmenting the total observation area. We show that stitching enables for the polarimetric assessment of large skin patches which is useful for the diagnosis of inflammatory skin diseases.
Collapse
Affiliation(s)
- Lennart Jütte
- Hannover Centre for Optical Technologies, Leibniz University Hannover, Hannover, Germany
| | - Harshkumar Patel
- Hannover Centre for Optical Technologies, Leibniz University Hannover, Hannover, Germany
| | - Bernhard Roth
- Hannover Centre for Optical Technologies, Leibniz University Hannover, Hannover, Germany
- PhoenixD, Leibniz University Hannover, Hannover, Germany
| |
Collapse
|
2
|
Jütte L, Sharma G, Patel H, Roth B. Registration of polarimetric images for in vivo skin diagnostics. JOURNAL OF BIOMEDICAL OPTICS 2022; 27:096001. [PMID: 36042549 PMCID: PMC9424913 DOI: 10.1117/1.jbo.27.9.096001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Accepted: 08/12/2022] [Indexed: 06/15/2023]
Abstract
SIGNIFICANCE Mueller matrix (MM) polarimetry is a promising tool for the detection of skin cancer. Polarimetric in vivo measurements often suffer from misalignment of the polarimetric images due to motion, which can lead to false results. AIM We aim to provide an easy-to-implement polarimetric image data registration method to ensure proper image alignment. APPROACH A feature-based image registration is implemented for an MM polarimeter for phantom and in vivo human skin measurements. RESULTS We show that the keypoint-based registration of polarimetric images is necessary for in vivo skin polarimetry to ensure reliable results. Further, we deliver an efficient semiautomated method for the registration of polarimetric images. CONCLUSIONS Image registration for in vivo polarimetry of human skin is required for improved diagnostics and can be efficiently enhanced with a keypoint-based approach.
Collapse
Affiliation(s)
- Lennart Jütte
- Leibniz University Hannover, Hannover Centre for Optical Technologies, Hannover, Germany
| | - Gaurav Sharma
- Leibniz University Hannover, Hannover Centre for Optical Technologies, Hannover, Germany
| | - Harshkumar Patel
- Leibniz University Hannover, Hannover Centre for Optical Technologies, Hannover, Germany
| | - Bernhard Roth
- Leibniz University Hannover, Hannover Centre for Optical Technologies, Hannover, Germany
- Leibniz University Hannover, Cluster of Excellence PhoenixD, Hannover, Germany
| |
Collapse
|
3
|
Ashraf MW, Le Gratiet A, Diaspro A. Computational Modeling of Chromatin Fiber to Characterize Its Organization Using Angle-Resolved Scattering of Circularly Polarized Light. Polymers (Basel) 2021; 13:polym13193422. [PMID: 34641237 PMCID: PMC8512730 DOI: 10.3390/polym13193422] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 10/01/2021] [Accepted: 10/03/2021] [Indexed: 12/19/2022] Open
Abstract
Understanding the structural organization of chromatin is essential to comprehend the gene functions. The chromatin organization changes in the cell cycle, and it conforms to various compaction levels. We investigated a chromatin solenoid model with nucleosomes shaped as cylindrical units arranged in a helical array. The solenoid with spherical-shaped nucleosomes was also modeled. The changes in chiral structural parameters of solenoid induced different compaction levels of chromatin fiber. We calculated the angle-resolved scattering of circularly polarized light to probe the changes in the organization of chromatin fiber in response to the changes in its chiral parameters. The electromagnetic scattering calculations were performed using discrete dipole approximation (DDA). In the chromatin structure, nucleosomes have internal interactions that affect chromatin compaction. The merit of performing computations with DDA is that it takes into account the internal interactions. We demonstrated sensitivity of the scattering signal’s angular behavior to the changes in these chiral parameters: pitch, radius, the handedness of solenoid, number of solenoid turns, the orientation of solenoid, the orientation of nucleosomes, number of nucleosomes, and shape of nucleosomes. These scattering calculations can potentially benefit applying a label-free polarized-light-based approach to characterize chromatin DNA and chiral polymers at the nanoscale level.
Collapse
Affiliation(s)
- Muhammad Waseem Ashraf
- Nanoscopy and NIC@IIT, CHT Erzelli, Istituto Italiano di Tecnologia, Via Enrico Melen 83, 16152 Genoa, Italy;
- DIFILAB, Department of Physics, University of Genoa, Via Dodecaneso 33, 16146 Genoa, Italy
- Correspondence: (M.W.A.); (A.D.)
| | - Aymeric Le Gratiet
- Nanoscopy and NIC@IIT, CHT Erzelli, Istituto Italiano di Tecnologia, Via Enrico Melen 83, 16152 Genoa, Italy;
- Institut FOTON-UMR 6082, Université de Rennes, CNRS, F-22305 Rennes, France
| | - Alberto Diaspro
- Nanoscopy and NIC@IIT, CHT Erzelli, Istituto Italiano di Tecnologia, Via Enrico Melen 83, 16152 Genoa, Italy;
- DIFILAB, Department of Physics, University of Genoa, Via Dodecaneso 33, 16146 Genoa, Italy
- Correspondence: (M.W.A.); (A.D.)
| |
Collapse
|
4
|
Delp A, Becker A, Hülsbusch D, Scholz R, Müller M, Glasmacher B, Walther F. In Situ Characterization of Polycaprolactone Fiber Response to Quasi-Static Tensile Loading in Scanning Electron Microscopy. Polymers (Basel) 2021; 13:polym13132090. [PMID: 34202874 PMCID: PMC8271998 DOI: 10.3390/polym13132090] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 06/17/2021] [Accepted: 06/22/2021] [Indexed: 11/25/2022] Open
Abstract
Microstructural responses to the mechanical load of polymers used in tissue engineering is notably important for qualification at in vivo testing, although insufficiently studied, especially regarding promising polycaprolactone (PCL). For further investigations, electrospun PCL scaffolds with different degrees of fiber alignment were produced, using two discrete relative drum collector velocities. Development and preparation of an adjusted sample geometry enabled in situ tensile testing in scanning electron microscopy. By analyzing the microstructure and the use of selected tracking techniques, it was possible to visualize and quantify fiber/fiber area displacements as well as local fractures of single PCL fibers, considering quasi-static tensile load and fiber alignment. The possibility of displacement determination using in situ scanning electron microscopy techniques for testing fibrous PCL scaffolds was introduced and quantified.
Collapse
Affiliation(s)
- Alexander Delp
- Department of Materials Test Engineering (WPT), TU Dortmund University, 44227 Dortmund, Germany; (D.H.); (R.S.); (F.W.)
- Correspondence: (A.D.); (A.B.)
| | - Alexander Becker
- Institute for Multiphase Processes, Leibniz University Hannover, 30823 Garbsen, Germany; (M.M.); (B.G.)
- Lower Saxony Center for Biomedical Engineering, Implant Research and Development (NIFE), 30625 Hannover, Germany
- Correspondence: (A.D.); (A.B.)
| | - Daniel Hülsbusch
- Department of Materials Test Engineering (WPT), TU Dortmund University, 44227 Dortmund, Germany; (D.H.); (R.S.); (F.W.)
| | - Ronja Scholz
- Department of Materials Test Engineering (WPT), TU Dortmund University, 44227 Dortmund, Germany; (D.H.); (R.S.); (F.W.)
| | - Marc Müller
- Institute for Multiphase Processes, Leibniz University Hannover, 30823 Garbsen, Germany; (M.M.); (B.G.)
- Lower Saxony Center for Biomedical Engineering, Implant Research and Development (NIFE), 30625 Hannover, Germany
| | - Birgit Glasmacher
- Institute for Multiphase Processes, Leibniz University Hannover, 30823 Garbsen, Germany; (M.M.); (B.G.)
- Lower Saxony Center for Biomedical Engineering, Implant Research and Development (NIFE), 30625 Hannover, Germany
| | - Frank Walther
- Department of Materials Test Engineering (WPT), TU Dortmund University, 44227 Dortmund, Germany; (D.H.); (R.S.); (F.W.)
| |
Collapse
|
5
|
Suresh S, Becker A, Glasmacher B. Impact of Apparatus Orientation and Gravity in Electrospinning-A Review of Empirical Evidence. Polymers (Basel) 2020; 12:polym12112448. [PMID: 33105879 PMCID: PMC7690589 DOI: 10.3390/polym12112448] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2020] [Revised: 10/19/2020] [Accepted: 10/20/2020] [Indexed: 12/29/2022] Open
Abstract
Electrospinning is a versatile fibre fabrication method with applications from textile to tissue engineering. Despite the appearance that the influencing parameters of electrospinning are fully understood, the effect of setup orientation has not been thoroughly investigated. With current burgeoning interest in modified and specialised electrospinning apparatus, it is timely to review the impact of this seldom-considered parameter. Apparatus configuration plays a major role in the morphology of the final product. The primary difference between spinning setups is the degree to which the electrical force and gravitational force contribute. Since gravity is much lower in magnitude when compared with the electrostatic force, it is thought to have no significant effect on the spinning process. But the shape of the Taylor cone, jet trajectory, fibre diameter, fibre diameter distribution, and overall spinning efficiency are all influenced by it. In this review paper, we discuss all these developments and more. Furthermore, because many research groups build their own electrospinning apparatus, it would be prudent to consider this aspect as particular orientations are more suitable for certain applications.
Collapse
Affiliation(s)
- Sinduja Suresh
- Institute for Multiphase Processes (IMP), Leibniz University Hannover, 30823 Garbsen, Hannover, Germany;
- Lower Saxony Centre for Biomedical Engineering, Implant Research and Development (NIFE), 30625 Hannover, Germany
- Hannover Medical School (MHH), 30625 Hannover, Germany
- Correspondence: (S.S.); (A.B.)
| | - Alexander Becker
- Institute for Multiphase Processes (IMP), Leibniz University Hannover, 30823 Garbsen, Hannover, Germany;
- Lower Saxony Centre for Biomedical Engineering, Implant Research and Development (NIFE), 30625 Hannover, Germany
- Correspondence: (S.S.); (A.B.)
| | - Birgit Glasmacher
- Institute for Multiphase Processes (IMP), Leibniz University Hannover, 30823 Garbsen, Hannover, Germany;
- Lower Saxony Centre for Biomedical Engineering, Implant Research and Development (NIFE), 30625 Hannover, Germany
| |
Collapse
|