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Pansy DL, Murali M. UAV hyperspectral remote sensor images for mango plant disease and pest identification using MD-FCM and XCS-RBFNN. ENVIRONMENTAL MONITORING AND ASSESSMENT 2023; 195:1120. [PMID: 37650944 DOI: 10.1007/s10661-023-11678-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2022] [Accepted: 08/04/2023] [Indexed: 09/01/2023]
Abstract
To diminish disease transmission together with promoting effective management techniques, it is crucial to monitor plant health and detect pathogens earlier. The initial part in reducing losses sourced from plant diseases is to make an accurate and earlier identification. Thus, the usage of unmanned aerial vehicle (UAV) hyperspectral imaging (HSI) sensors for surveying and assessing crops, orchards, and forests has rapidly elevated over the last decade, particularly for the stress management like water, diseases, nutrition deficits, and pests. Using Minkowski Distance-based Fuzzy C Means (MD-FCM) clustering and Xavier initialization-adapted Cosine Similarity-induced Radial Bias Function Neural Network (XCS-RBFNN) techniques, a UAV HS imaging remote sensor for Spatial and Temporal Resolution (STR) of mango plant disease and pest identification is proposed in this scheme. Collecting the input UAV source (image or video) is eventuated initially along with the Region of Interest (ROI) calculated which is followed by preprocessing. Leaf segmentation is eventuated using Logistic U-net after preprocessing. Next, MD-FCM performs clustering to cluster the diseased leaves and pests individually. The disease and pest characteristics are then retrieved separately and classified further. The requisite features are then chosen from the retrieved features utilizing the Levy Flight Distribution-produced Butterfly Optimization Algorithm (LFD-BOA). Finally, the XCS-RBFNN classifier is utilized to categorize the various diseases together with pests found in the UAV input source using the chosen features. The proposed framework's experimental findings are then compared to some prevailing schemes, with the results revealing that the proposed work outperforms other benchmark techniques.
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Affiliation(s)
- D Lita Pansy
- Department of Computing Technologies, SRM Institute of Science and Technology, Kattankulathur, 603 203, India.
| | - M Murali
- Department of Computing Technologies, SRM Institute of Science and Technology, Kattankulathur, 603 203, India
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Liu Q, Sun T, Wen X, Zeng M, Chen J. Detecting the Minimum Limit on Wheat Stripe Rust in the Latent Period Using Proximal Remote Sensing Coupled with Duplex Real-Time PCR and Machine Learning. PLANTS (BASEL, SWITZERLAND) 2023; 12:2814. [PMID: 37570968 PMCID: PMC10420842 DOI: 10.3390/plants12152814] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Revised: 07/27/2023] [Accepted: 07/27/2023] [Indexed: 08/13/2023]
Abstract
Wheat stripe rust (WSR) is an airborne disease that causes severe damage to wheat. The rapid and early detection of WSR is essential for the prevention and control of this disease. The minimum detection limit (MDL) is one of the most important characteristics of quantitative methods that can be used to determine the scope and applicability of a measurement technique. Three wheat cultivars were inoculated with Puccinia striiformis f.sp. tritici (Pst), and a spectrometer was used to collect the canopy hyperspectral data, and the Pst content was obtained via a duplex real-time polymerase chain reaction (PCR) during the latent period, respectively. The disease index (DI) and molecular disease index (MDI) were calculated. The regression tree algorithm was used to determine the MDL of the Pst based on hyperspectral feature parameters. The logistic, IBK, and random committee algorithms were used to construct the classification model based on the MDL. The results showed that when the MDL was 0.7, IBK had the best recognition accuracy. The optimal model, which used the spectral feature R_2nd.dv ((the second derivative of the original hyperspectral value)) and the modeling ratio 2:1, had an accuracy of 91.67% on the testing set and 90.67% on the 10-fold cross-validation. Thus, during the latent period, the MDL of Pst was determined using hyperspectral technology as 0.7.
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Affiliation(s)
- Qi Liu
- Key Laboratory of the Pest Monitoring and Safety Control of Crops and Forests of the Xinjiang Uygur Autonomous Region, College of Agronomy, Xinjiang Agricultural University, Urumqi 830052, China; (T.S.)
- Key Laboratory of Prevention and Control of Invasive Alien Species in Agriculture & Forestry of the North-Western Desert Oasis, Ministry of Agriculture and Rural Affairs, Urumqi 830052, China
| | - Tingting Sun
- Key Laboratory of the Pest Monitoring and Safety Control of Crops and Forests of the Xinjiang Uygur Autonomous Region, College of Agronomy, Xinjiang Agricultural University, Urumqi 830052, China; (T.S.)
- Key Laboratory of Prevention and Control of Invasive Alien Species in Agriculture & Forestry of the North-Western Desert Oasis, Ministry of Agriculture and Rural Affairs, Urumqi 830052, China
| | - Xiaojie Wen
- Key Laboratory of the Pest Monitoring and Safety Control of Crops and Forests of the Xinjiang Uygur Autonomous Region, College of Agronomy, Xinjiang Agricultural University, Urumqi 830052, China; (T.S.)
- Key Laboratory of Prevention and Control of Invasive Alien Species in Agriculture & Forestry of the North-Western Desert Oasis, Ministry of Agriculture and Rural Affairs, Urumqi 830052, China
| | - Minghao Zeng
- Key Laboratory of the Pest Monitoring and Safety Control of Crops and Forests of the Xinjiang Uygur Autonomous Region, College of Agronomy, Xinjiang Agricultural University, Urumqi 830052, China; (T.S.)
- Key Laboratory of Prevention and Control of Invasive Alien Species in Agriculture & Forestry of the North-Western Desert Oasis, Ministry of Agriculture and Rural Affairs, Urumqi 830052, China
| | - Jing Chen
- Key Laboratory of the Pest Monitoring and Safety Control of Crops and Forests of the Xinjiang Uygur Autonomous Region, College of Agronomy, Xinjiang Agricultural University, Urumqi 830052, China; (T.S.)
- Key Laboratory of Prevention and Control of Invasive Alien Species in Agriculture & Forestry of the North-Western Desert Oasis, Ministry of Agriculture and Rural Affairs, Urumqi 830052, China
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Luo Y, Huang H, Roques A. Early Monitoring of Forest Wood-Boring Pests with Remote Sensing. ANNUAL REVIEW OF ENTOMOLOGY 2023; 68:277-298. [PMID: 36198398 DOI: 10.1146/annurev-ento-120220-125410] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Wood-boring pests (WBPs) pose an enormous threat to global forest ecosystems because their early stage infestations show no visible symptoms and can result in rapid and widespread infestations at later stages, leading to large-scale tree death. Therefore, early-stage WBP detection is crucial for prompt management response. Early detection of WBPs requires advanced and effective methods like remote sensing. This review summarizes the applications of various remote sensing sensors, platforms, and detection methods for monitoring WBP infestations. The current capabilities, gaps in capabilities, and future potential for the accurate and rapid detection of WBPs are highlighted.
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Affiliation(s)
- Youqing Luo
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, P.R. China;
- Sino-French Joint Laboratory for Invasive Forest Pests in Eurasia, Beijing Forestry University/French National Research Institute for Agriculture, Food and Environment (INRAE), Beijing, P.R. China/Paris, France
| | - Huaguo Huang
- Research Center of Forest Management Engineering of State Forestry and Grassland Administration, Beijing Forestry University, Beijing, P.R. China;
| | - Alain Roques
- Sino-French Joint Laboratory for Invasive Forest Pests in Eurasia, Beijing Forestry University/French National Research Institute for Agriculture, Food and Environment (INRAE), Beijing, P.R. China/Paris, France
- INRAE-Zoologie Forestière, Centre de recherche Val de Loire, Orléans, France;
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Yu R, Huo L, Huang H, Yuan Y, Gao B, Liu Y, Yu L, Li H, Yang L, Ren L, Luo Y. Early detection of pine wilt disease tree candidates using time-series of spectral signatures. FRONTIERS IN PLANT SCIENCE 2022; 13:1000093. [PMID: 36311089 PMCID: PMC9606806 DOI: 10.3389/fpls.2022.1000093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/21/2022] [Accepted: 09/29/2022] [Indexed: 06/16/2023]
Abstract
Pine wilt disease (PWD), caused by pine wood nematode (PWN), poses a tremendous threat to global pine forests because it can result in rapid and widespread infestations within months, leading to large-scale tree mortality. Therefore, the implementation of preventive measures relies on early detection of PWD. Unmanned aerial vehicle (UAV)-based hyperspectral images (HSI) can detect tree-level changes and are thus an effective tool for forest change detection. However, previous studies mainly used single-date UAV-based HSI data, which could not monitor the temporal changes of disease distribution and determine the optimal detection period. To achieve these purposes, multi-temporal data is required. In this study, Pinus koraiensis stands were surveyed in the field from May to October during an outbreak of PWD. Concurrently, multi-temporal UAV-based red, green, and blue bands (RGB) and HSI data were also obtained. During the survey, 59 trees were confirmed to be infested with PWD, and 59 non-infested trees were used as control. Spectral features of each tree crown, such as spectral reflectance, first and second-order spectral derivatives, and vegetation indices (VIs), were analyzed to identify those useful for early monitoring of PWD. The Random Forest (RF) classification algorithm was used to examine the separability between the two groups of trees (control and infested trees). The results showed that: (1) the responses of the tree crown spectral features to PWD infestation could be detected before symptoms were noticeable in RGB data and field surveys; (2) the spectral derivatives were the most discriminable variables, followed by spectral reflectance and VIs; (3) based on the HSI data from July to October, the two groups of trees were successfully separated using the RF classifier, with an overall classification accuracy of 0.75-0.95. Our results illustrate the potential of UAV-based HSI for PWD early monitoring.
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Affiliation(s)
- Run Yu
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, China
| | - Langning Huo
- Department of Forest Resource Management, Swedish University of Agriculture Sciences, Umeå, Sweden
| | - Huaguo Huang
- Research Center of Forest Management Engineering of State Forestry and Grassland Administration, Beijing Forestry University, Beijing, China
| | - Yuan Yuan
- French National Research Institute for Agriculture, Food and Environment (INRAE)—Zoologie Forestiere Centre de recherche d’Orléans, Orléans, France
| | - Bingtao Gao
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, China
| | - Yujie Liu
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, China
| | - Linfeng Yu
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, China
| | - Haonan Li
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, China
| | - Liyuan Yang
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, China
| | - Lili Ren
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, China
- Sino-French Joint Laboratory for Invasive Forest Pests in Eurasia, Beijing Forestry University—French National Research Institute for Agriculture, Food and Environment (INRAE), Beijing, China
| | - Youqing Luo
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, China
- Sino-French Joint Laboratory for Invasive Forest Pests in Eurasia, Beijing Forestry University—French National Research Institute for Agriculture, Food and Environment (INRAE), Beijing, China
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Abstract
In recent years, technological advances have led to the increasing use of unmanned aerial vehicles (UAVs) for forestry applications. One emerging field for drone application is forest health monitoring (FHM). Common approaches for FHM involve small-scale resource-extensive fieldwork combined with traditional remote sensing platforms. However, the highly dynamic nature of forests requires timely and repetitive data acquisition, often at very high spatial resolution, where conventional remote sensing techniques reach the limits of feasibility. UAVs have shown that they can meet the demands of flexible operation and high spatial resolution. This is also reflected in a rapidly growing number of publications using drones to study forest health. Only a few reviews exist which do not cover the whole research history of UAV-based FHM. Since a comprehensive review is becoming critical to identify research gaps, trends, and drawbacks, we offer a systematic analysis of 99 papers covering the last ten years of research related to UAV-based monitoring of forests threatened by biotic and abiotic stressors. Advances in drone technology are being rapidly adopted and put into practice, further improving the economical use of UAVs. Despite the many advantages of UAVs, such as their flexibility, relatively low costs, and the possibility to fly below cloud cover, we also identified some shortcomings: (1) multitemporal and long-term monitoring of forests is clearly underrepresented; (2) the rare use of hyperspectral and LiDAR sensors must drastically increase; (3) complementary data from other RS sources are not sufficiently being exploited; (4) a lack of standardized workflows poses a problem to ensure data uniformity; (5) complex machine learning algorithms and workflows obscure interpretability and hinders widespread adoption; (6) the data pipeline from acquisition to final analysis often relies on commercial software at the expense of open-source tools.
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Recent Advances in Forest Insect Pests and Diseases Monitoring Using UAV-Based Data: A Systematic Review. FORESTS 2022. [DOI: 10.3390/f13060911] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Unmanned aerial vehicles (UAVs) are platforms that have been increasingly used over the last decade to collect data for forest insect pest and disease (FIPD) monitoring. These machines provide flexibility, cost efficiency, and a high temporal and spatial resolution of remotely sensed data. The purpose of this review is to summarize recent contributions and to identify knowledge gaps in UAV remote sensing for FIPD monitoring. A systematic review was performed using the preferred reporting items for systematic reviews and meta-analysis (PRISMA) protocol. We reviewed the full text of 49 studies published between 2015 and 2021. The parameters examined were the taxonomic characteristics, the type of UAV and sensor, data collection and pre-processing, processing and analytical methods, and software used. We found that the number of papers on this topic has increased in recent years, with most being studies located in China and Europe. The main FIPDs studied were pine wilt disease (PWD) and bark beetles (BB) using UAV multirotor architectures. Among the sensor types, multispectral and red–green–blue (RGB) bands were preferred for the monitoring tasks. Regarding the analytical methods, random forest (RF) and deep learning (DL) classifiers were the most frequently applied in UAV imagery processing. This paper discusses the advantages and limitations associated with the use of UAVs and the processing methods for FIPDs, and research gaps and challenges are presented.
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