Classification of Several Optically Complex Waters in China Using in Situ Remote Sensing Reflectance

Refinement method for compressive hyperspectral data cubes based on self-fusion

Compressive hyperspectral images often suffer from various noises and artifacts, which severely degrade the imaging quality and limit subsequent applications. In this paper, we present a refinement method for compressive hyperspectral data cubes based on self-fusion of the raw data cubes, which can effectively reduce various noises and improve the spatial and spectral details of the data cubes. To verify the universality, flexibility, and extensibility of the self-fusion refinement (SFR) method, a series of specific simulations and practical experiments were conducted, and SFR processing was performed through different fusion algorithms. The visual and quantitative assessments of the results demonstrate that, in terms of noise reduction and spatial-spectral detail restoration, the SFR method generally is much better than other typical denoising methods for hyperspectral data cubes. The results also indicate that the denoising effects of SFR greatly depend on the fusion algorithm used, and SFR implemented by joint bilateral filtering (JBF) performs better than SRF by guided filtering (GF) or a Markov random field (MRF). The proposed SFR method can significantly improve the quality of a compressive hyperspectral data cube in terms of noise reduction, artifact removal, and spatial and spectral detail improvement, which will further benefit subsequent hyperspectral applications.

The Use of Sentinel-3/OLCI for Monitoring the Water Quality and Optical Water Types in the Largest Portuguese Reservoir

The Alqueva reservoir is essential for water supply in the Alentejo region (south of Portugal). Satellite data are essential to overcome the temporal and spatial limitations of in situ measurements, ensuring continuous and global water quality monitoring. Data between 2017 and 2020, obtained from OLCI (Ocean and Land Color Instrument) aboard Sentinel-3, were explored. Two different methods were used to assess the water quality in the reservoir: K-means to group reflectance spectra into different optical water types (OWT), and empirical algorithms to estimate water quality parameters. Spatial (in five different areas in the reservoir) and temporal (monthly) variations of OWT and water quality parameters were analyzed, namely, Secchi depth, water turbidity, chlorophyll a, and phycocyanin concentrations. One cluster has been identified representing the typical spectra of the presence of microalgae in the reservoir, mainly between July and October and more intense in the northern region of the Alqueva reservoir. An OWT type representing the area of the reservoir with the highest transparency and lowest chlorophyll a concentration was defined. The methodology proposed is suitable to continuously monitor the water quality of Alqueva reservoir, constituting a useful contribution to a potential early warning system for identification of critical areas corresponding to cyanobacterial algae blooms.

Monitoring Optical Variability in Complex Inland Waters Using Satellite Remote Sensing Data

Optical classification for water bodies was carried out based on satellite remote sensing data, which avoided the limitation of having a limited amount of in situ measured spectral data. Unsupervised cluster analysis was performed on 53,815 reflectance spectra extracted at 500-m intervals based on the same season or quasi-same season Landsat 8 SR data using the algorithm of fuzzy c-means. Lakes and reservoirs in the study area were comprehensively identified as three optical types representing different limnological features. The shape and amplitude characteristics of the reflectance spectra for the three optical water types indicated that one corresponds to the clearest water, one corresponds to turbid water, and the other is moderate clear water. The novelty detection technique was further used to label the match-ups of the in situ data set collected during 2006 to 2019 in 12 field surveys based on mathematical rules of the three optical water types. The results confirmed that each optical water type was associated with different bio-optical properties, and the total suspended matter of the clearest, moderate clear and turbid water types were 14.99 mg/L, 41.06 mg/L and 83.81 mg/L, respectively. Overall, the clearest, moderate clear and turbid waters in the study area accounted for 49.3%, 36.7% and 14.0%, respectively. The spatial distribution of optical water types in the study area was seamlessly mapped. Results showed that the bio-optical conditions of the water distributed across the southeast region were roughly homogeneous, but in most of other regions and within some water bodies, they showed a patchy distribution and heterogeneity. This study is useful for monitoring water quality and provides a useful foundation to develop or tuning algorithms to retrieve water quality parameters.

Optical Classification of Lower Amazon Waters Based on In Situ Data and Sentinel-3 Ocean and Land Color Instrument Imagery

Optical water types (OWTs) were identified from an in situ dataset of concomitant biogeochemical and optical parameters acquired in the Amazon River and its tributaries, in the Lower Amazon region, at different hydrological conditions from 2014 to 2017. A seasonal bio-optical characterization was performed. The k-means classification was applied to the in situ normalized reflectance spectra (rn(λ)), allowing the identification of four OWTs. An optical index method was also applied to the rn(λ) defining the thresholds of the OWTs. Next, level-3 Sentinel-3 Ocean and Land Color Instrument images representative of the seasonal discharge conditions were classified using the identified in situ OWTs as reference. The differences between Amazon River and clearwater tributary OWTs were dependent on the hydrological dynamics of the Amazon River, also showing a strong seasonal variability. Each OWT was associated with a specific bio-optical and biogeochemical environment assessed from the corresponding absorption coefficient values of colored dissolved organic matter (aCDOM) and particulate matter (ap), chlorophyll-a and suspended particulate matter (SPM) concentrations, and aCDOM/ap ratio. The rising water season presented a unique OWT with high SPM concentration and high relative contribution of ap to total absorption compared to the other OWTs. This bio-optical characterization of Lower Amazon River waters represents a first step for developing remote sensing inversion models adjusted to the optical complexity of this region.

Classification of Australian Waterbodies across a Wide Range of Optical Water Types

Baseline determination and operational continental scale monitoring of water quality are required for reporting on marine and inland water progress to Sustainable Development Goals (SDG). This study aims to improve our knowledge of the optical complexity of Australian waters. A workflow was developed to cluster the modelled spectral response of a range of in situ bio-optical observations collected in Australian coastal and continental waters into distinct optical water types (OWTs). Following clustering and merging, most of the modelled spectra and modelled specific inherent optical properties (SIOP) sets were clustered in 11 OWTs, ranging from clear blue coastal waters to very turbid inland lakes. The resulting OWTs were used to classify Sentinel-2 MSI surface reflectance observations extracted over relatively permanent water bodies in three drainage regions in Eastern Australia. The satellite data classification demonstrated clear limnological and seasonal differences in water types within and between the drainage divisions congruent with general limnological, topographical, and climatological factors. Locations of unclassified observations can be used to inform where in situ bio-optical data acquisition may be targeted to capture a more comprehensive characterization of all Australian waters. This can contribute to global initiatives like the SDGs and increases the diversity of natural water in global databases.

Validation and Comparison of Water Quality Products in Baltic Lakes Using Sentinel-2 MSI and Sentinel-3 OLCI Data

Inland waters, including lakes, are one of the key points of the carbon cycle. Using remote sensing data in lake monitoring has advantages in both temporal and spatial coverage over traditional in-situ methods that are time consuming and expensive. In this study, we compared two sensors on different Copernicus satellites: Multispectral Instrument (MSI) on Sentinel-2 and Ocean and Land Color Instrument (OLCI) on Sentinel-3 to validate several processors and methods to derive water quality products with best performing atmospheric correction processor applied. For validation we used in-situ data from 49 sampling points across four different lakes, collected during 2018. Level-2 optical water quality products, such as chlorophyll-a and the total suspended matter concentrations, water transparency, and the absorption coefficient of the colored dissolved organic matter were compared against in-situ data. Along with the water quality products, the optical water types were obtained, because in lakes one-method-to-all approach is not working well due to the optical complexity of the inland waters. The dynamics of the optical water types of the two sensors were generally in agreement. In most cases, the band ratio algorithms for both sensors with optical water type guidance gave the best results. The best algorithms to obtain the Level-2 water quality products were different for MSI and OLCI. MSI always outperformed OLCI, with R² 0.84–0.97 for different water quality products. Deriving the water quality parameters with optical water type classification should be the first step in estimating the ecological status of the lakes with remote sensing.

Comparison of Lake Optical Water Types Derived from Sentinel-2 and Sentinel-3

Inland waters play a critical role in our drinking water supply. Additionally, they areimportant providers of food and recreation possibilities. Inland waters are known to be opticallycomplex and more diverse than marine or ocean waters. The optical properties of natural waters areinfluenced by three different and independent sources: phytoplankton, suspended matter, andcolored dissolved organic matter. Thus, the remote sensing of these waters is more challenging.Different types of waters need different approaches to obtain correct water quality products;therefore, the first step in remote sensing of lakes should be the classification of the water types. Theclassification of optical water types (OWTs) is based on the differences in the reflectance spectra ofthe lake water. This classification groups lake and coastal waters into five optical classes: Clear,Moderate, Turbid, Very Turbid, and Brown. We studied the OWTs in three different Latvian lakes:Burtnieks, Lubans, and Razna, and in a large Estonian lake, Lake Võrtsjärv. The primary goal of thisstudy was a comparison of two different Copernicus optical instrument data for opticalclassification in lakes: Ocean and Land Color Instrument (OLCI) on Sentinel-3 and MultispectralInstrument (MSI) on Sentinel-2. We found that both satellite OWT classifications in lakes werecomparable (R2 = 0.74). We were also able to study the spatial and temporal changes in the OWTs ofthe study lakes during 2017. The comparison between two satellites was carried out to understandif the classification of the OWTs with both satellites is compatible. Our results could give us not onlya better overview of the changes in the lake water by studying the temporal and spatial variabilityof the OWTs, but also possibly better retrieval of Level 2 satellite products when using OWT guidedapproach.

Using Optical Water Types to Monitor Changes in Optically Complex Inland and Coastal Waters

The European Space Agency’s Copernicus satellites Sentinel-2 and Sentinel-3 provide observations with high spectral, spatial, and temporal resolution which can be used to monitor inland and coastal waters. Such waters are optically complex, and the water color may vary from completely clear to dark brown. The main factors influencing water color are colored dissolved organic matter, phytoplankton, and suspended sediments. Recently, there has been a growing interest in the use of the optical water type (OWT) classification in the remote sensing of ocean color. Such classification helps to clarify relationships between different properties inside a certain class and quantify variation between classes. In this study, we present a new OWT classification based on the in situ measurements of reflectance spectra for boreal region lakes and coastal areas without extreme optical conditions. This classification divides waters into five OWT (Clear, Moderate, Turbid, Very Turbid, and Brown) and shows that different OWTs have different remote sensing reflectance spectra and that each OWT is associated with a specific bio-optical condition. Developed OWTs are distinguishable by both the MultiSpectral Instrument (MSI) and the Ocean and Land Color Instrument (OLCI) sensors, and the accuracy of the OWT assignment was 95% for both the MSI and OLCI bands. To determine OWT from MSI images, we tested different atmospheric correction (AC) processors, namely ACOLITE, C2RCC, POLYMER, and Sen2Cor and for OLCI images, we tested AC processors ALTNNA, C2RCC, and L2. The C2RCC AC processor was the most accurate and reliable for use with MSI and OLCI images to estimate OWTs.

Regional Vicarious Calibration of the SWIR-Based Atmospheric Correction Approach for MODIS-Aqua Measurements of Highly Turbid Inland Water

Water color remote sensing requires accurate atmospheric correction but this remains a significant challenge in highly turbid waters. In this respect, the shortwave infrared (SWIR) band-based atmospheric correction approach has proven advantageous when applied to the moderate resolution imaging spectroradiometer (MODIS) onboard the Aqua satellite. However, even so, uncertainties affect its accuracy. We performed a regional vicarious calibration of the MODIS-Aqua SWIR (1240, 2130)-based atmospheric correction using in situ water surface reflectance data measured during different seasons in Lake Taihu, a highly turbid lake. We then verified the accuracy of the (1240, 2130)-based atmospheric correction approach using these results; good results were obtained for the remote sensing reflectance retrievals at the 555, 645, and 859 nm, with average relative errors of 15%, 14%, and 22%, respectively, and no significant bias. Comparisons with the (1240, 2130)-based iterative approach and (1640, 2130)-based approach showed that the vicarious calibrated (1240, 2130)-based approach has the best accuracy and robustness. Thus, it is applicable to the highly turbid Lake Taihu. It may also be applicable to other highly turbid inland waters with similar optical and aerosol optical properties above water, but such applications will require further validation.

Quantifying the trophic status of lakes using total light absorption of optically active components

Eutrophication of lakes has become one of the world's most serious environmental problems, resulting in an urgent need to monitor and provide safeguards to control water quality. Results from analysis of lake trophic status based on calculated throphic state index (TSI) showed that 69.5% of the surveyed 277 lakes were in a state of eutrophication. Significant logarithmic relationships between light absorption of optically active components (a_OACs) and TSI (R² = 0.78) existed: TSI = 13.64 × ln(a_OACs)+43.24, and the regression relationship between a_OACs and TSI had a better degree of fit (R²) than the currently used reflectance-TSI relationship. a_OACs appeared to be a good predictor of TSI estimation in lake ecosystems. The relationship coefficient (a_OACs-TSI) slightly varied with lake type, and relationships in saline lakes and phy-type lakes were shown to be more robust than the relationship with the total lake data. This study highlights the quantification of the trophic status in lakes using a_OACs, which realized the monitoring of trophic status in lakes using inherent optical properties on a large-scale. To our knowledge this is the first investigation to assess the variability of trophic status in lakes across China. The assessment trophic state of lakes based on a_OACs provides a new way to monitor the trophic status of lakes, and findings may have applications for monitoring large-scale and long-term trophic patterns in lakes using remote sensing techniques.

Light Absorption Budget in a Reservoir Cascade System with Widely Differing Optical Properties

Aquatic systems are complex systems due to the environmental pressures that lead to water quality parameter changes, and consequently, variations in optically active compounds (OAC). In cascading reservoir systems, such as the Tietê Cascade Reservoir System (TCSR), which has a length of 1100 km, the horizontal gradients are expressive due to the filtration process that is caused by the sequence of dams affecting the light absorption throughout the cascade. Our new observations showed that colored dissolved organic matter (CDOM) dominate two reservoirs; non-algae particles (NAP) dominate one, and phytoplankton dominates the other. The variability of light absorption along the cascade indicates the influence of watershed dynamics in the reservoirs as much as the flow driven by previous reservoirs. Despite the effect of the variability of light absorption, light absorption by phytoplankton strongly affects the total absorption in the four reservoirs in TCSR. The results obtained in this work may enable a better understanding of how the gradient pattern changes primary production and indicates a challenge in retrieving OAC concentrations using a bio-optical model for an entire cascade composed of different optical environments.

Remote estimation of cyanobacterial blooms using the risky grade index (RGI) and coverage area index (CAI): a case study in the Three Gorges Reservoir, China

Harmful cyanobacterial blooms are exemplified as a major environmental concern due to producing toxin, and have generated a serious threat to public health. Knowledge on the spatial-temporal distribution of cyanobacterial blooms is therefore crucial for public health organizations and environmental agencies. In this study, field data and charge coupled device (CCD) image were collected in Lakes Gaoyang and Hanfeng of the Three Gorges Reservoir (TGR), China. We conducted the risky grade index (RGI) and coverage area index to develop a feasible estimation framework of cyanobacterial blooms. First, the close relationships between CCD reflectance spectral indices and water quality parameters were constructed based on water optical classification. Then, a regional algorithm for the RGI classification was established by density peaks. Finally, our proposed algorithm was applied to investigate dynamics of cyanobacterial blooms in the two lakes from 6-year series of CCD images. Encouraging results demonstrated that satellite remote sensing in conjunction with field observation can aid in the estimation of cyanobacterial blooms in the TGR.