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Wang L, Sun J, Dai S, Zhang P, Zhu Y, Zhang Y. Multiplexed centrifugal microfluidic system for rapid and non-invasive detection of myocardial fibrosis. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2025; 17:601-610. [PMID: 39676525 DOI: 10.1039/d4ay01703j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2024]
Abstract
Myocardial fibrosis is a pathological condition characterized by the excessive accumulation of extracellular matrix proteins, primarily collagen, within the myocardium. Early symptoms of myocardial fibrosis are often subtle, leading to late detection. As the disease progresses, it is often associated with life-threatening complications. Therefore, myocardial fibrosis urgently demands a diagnostic system that is rapid, effective, and preferably non-invasive. In this study, we developed a highly sensitive microfluidic light-initiated chemiluminescent assay (LICA) for the simultaneous detection of cTnI, NT-proBNP, HA, LN, PICP, and PIIINP, the key biomarkers involved in the occurrence and development of myocardial fibrosis. The system is highly integrated and compact, incorporating reagent lyophilization and whole blood separation technologies, and is suitable for point-of-care testing. By combining advantages of centrifugal microfluidics and LICA, the system effectively shortens the detection time for key biomarkers associated with MACEs. Moreover, the system provides optimal analytical performance, with LoDs of 0.0018 ng mL-1, 0.0127 ng mL-1, 3.52 ng mL-1, 6.88 ng mL-1, 4.68 ng mL-1, and 0.072 ng mL-1 for cTnI, NT-proBNP, HA, LN, PIIINP and PICP, respectively. Ultimately, the system can achieve an AUC of 0.548, 0.670, 0.772, 0.752, 0.833 and 0.713 for cTnI, NT-proBNP, HA, LN, PIIINP, and PICP, respectively, and an overall combined ROC of 0.946 for the detection of myocardial fibrosis, indicating its excellent efficacy and potential for widespread clinical applications.
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Affiliation(s)
- Luhai Wang
- State Key Laboratory of Digital Medical Engineering, Jiangsu Key Laboratory for Biomaterials and Devices, School of Biological Science and Medical Engineering, Southeast University, Nanjing 210000, China.
- Getein Biotechnology Co., Ltd., Nanjing 210000, China
| | - Jiaze Sun
- Getein Biotechnology Co., Ltd., Nanjing 210000, China
| | - Siwei Dai
- Getein Biotechnology Co., Ltd., Nanjing 210000, China
| | - Pengfei Zhang
- Getein Biotechnology Co., Ltd., Nanjing 210000, China
| | - Yefei Zhu
- Laboratory Medicine Center, The Second Affiliated Hospital of Nanjing Medical University, Nanjing 210011, China.
| | - Yu Zhang
- State Key Laboratory of Digital Medical Engineering, Jiangsu Key Laboratory for Biomaterials and Devices, School of Biological Science and Medical Engineering, Southeast University, Nanjing 210000, China.
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2
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Madadelahi M, Agarwal R, Martinez-Chapa SO, Madou MJ. A roadmap to high-speed polymerase chain reaction (PCR): COVID-19 as a technology accelerator. Biosens Bioelectron 2024; 246:115830. [PMID: 38039729 DOI: 10.1016/j.bios.2023.115830] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 11/07/2023] [Accepted: 11/08/2023] [Indexed: 12/03/2023]
Abstract
The limit of detection (LOD), speed, and cost of crucial COVID-19 diagnostic tools, including lateral flow assays (LFA), enzyme-linked immunosorbent assays (ELISA), and polymerase chain reactions (PCR), have all improved because of the financial and governmental support for the epidemic. The most notable improvement in overall efficiency among them has been seen with PCR. Its significance for human health increased during the COVID-19 pandemic, when it emerged as the commonly used approach for identifying the virus. However, because of problems with speed, complexity, and expense, PCR deployment in point-of-care settings continues to be difficult. Microfluidic platforms offer a promising solution by enabling the development of smaller, more affordable, and faster PCR systems. In this review, we delve into the engineering challenges associated with the advancement of high-speed microfluidic PCR equipment. We introduce criteria that facilitate the evaluation and comparison of factors such as speed, LOD, cycling efficiency, and multiplexing capacity, considering sample volume, fluidics, PCR reactor geometry and materials, as well as heating/cooling methods. We also provide a comprehensive list of commercially available PCR devices and conclude with projections and a discussion regarding the current obstacles that need to be addressed in order to progress further in this field.
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Affiliation(s)
- Masoud Madadelahi
- School of Engineering and Sciences, Tecnologico de Monterrey, Monterrey, 64849, NL, Mexico; Department of Mechanical Engineering, Isfahan University of Technology, Isfahan, 84156-83111, Iran.
| | - Rahul Agarwal
- School of Engineering and Sciences, Tecnologico de Monterrey, Monterrey, 64849, NL, Mexico
| | | | - Marc J Madou
- School of Engineering and Sciences, Tecnologico de Monterrey, Monterrey, 64849, NL, Mexico; Autonomous Medical Devices Incorporated (AMDI), Santa Ana, CA, 92704, USA.
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3
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Dong Y, Chen B, Cai G, Xu F, Li L, Cheng X, Shi X, Peng B, Mi S. Integrated nucleic acid purification technology based on amino-modified centrifugal microfluidic chip. Biotechnol J 2024; 19:e2300113. [PMID: 38050772 DOI: 10.1002/biot.202300113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2023] [Revised: 11/27/2023] [Accepted: 12/01/2023] [Indexed: 12/06/2023]
Abstract
Nucleic acid detection is an important tool for clinical diagnosis. The purification of the sample is the most time-consuming step in the nucleic acid testing process and will affect the results of the assay. Here, we developed a surface modification-based nucleic acid purification method and designed an accompanying set of centrifugation equipment and chips to integrate the steps of nucleic acid purification on a single platform. The results of experiments with HeLa cells and HPV type 16 as samples showed that the mentioned method had good nucleic acid purification capability and the accompanying equipment greatly simplified the operation of the experimenters in the whole process. Overall, our equipment can improve the efficiency of nucleic acid purification and is suitable for application in larger-scale clinical assays.
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Affiliation(s)
- Yongkang Dong
- Bio-manufacturing Engineering Laboratory, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
| | - Bailiang Chen
- Bio-manufacturing Engineering Laboratory, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
| | - Gangpei Cai
- Bio-manufacturing Engineering Laboratory, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
| | - Fei Xu
- Bio-manufacturing Engineering Laboratory, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
| | - Linzhi Li
- Bio-manufacturing Engineering Laboratory, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
| | - Xiaoqi Cheng
- Bio-manufacturing Engineering Laboratory, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
| | - Xiaolu Shi
- Microbiology Laboratory, Shenzhen Center for Disease Control and Prevention, Shenzhen, Guangdong, China
| | - Bo Peng
- Microbiology Laboratory, Shenzhen Center for Disease Control and Prevention, Shenzhen, Guangdong, China
| | - Shengli Mi
- Bio-manufacturing Engineering Laboratory, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, China
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4
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Carthy É, Hughes B, Higgins E, Early P, Merne C, Walsh D, Parle-McDermott A, Kinahan DJ. Automated solid phase DNA extraction on a lab-on-a-disc with two-degrees of freedom instrumentation. Anal Chim Acta 2023; 1280:341859. [PMID: 37858565 DOI: 10.1016/j.aca.2023.341859] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Revised: 09/15/2023] [Accepted: 09/29/2023] [Indexed: 10/21/2023]
Abstract
BACKGROUND Lab-on-a-disc (LoaD) technology has emerged as a transformative approach for point-of-care diagnostics and high-throughput testing. The promise of integrating multiple laboratory functions onto a single integrated platform has significant implications for healthcare, especially in resource-limited settings. However, one of the primary challenges faced in the design and manufacture of LoaD devices is the integration of effective valving mechanisms. These valves are essential for fluid control and routing, but their intricacy often leads to complexities in design and increased vulnerability to failure. This emphasizes the need for improved designs and manufacturing processes without complex, integrated valving mechanisms. (96) RESULTS: We describe a fully automated biological workflow and reagent actuation on a LoaD device without an integrated valving system. The Two Degrees-of-Freedom (2DoF) custom centrifuge alters the centre of rotation, facilitating fluid flow direction changes on the microfluidic platform through a custom programmed interface. A novel 360-degree fluid manipulation approach via secondary planetary gear motion enabled sequential assay reagent actuation without embedded valve triggering, with the addition of infinite incubation times and efficient use of platform realty. The simplified LoaD platform uses clever design, with intermediate flow chambers to avoid cross contamination between reagent steps. Notably, the optimized LoaD platform demonstrated a two-fold DNA yield at higher HEK-293 cell concentrations compared to commercially available spin-column kits. This significantly simplified LoaD platform successfully automated a common, complex workflow without inhibiting DNA purification. (129) SIGNIFICANCE: This system exhibits the clever coupling of both 2DoF and centrifugal microfluidics to create an autonomous testing package capable of eradicating the need for complex valving systems to automate biological workflows on LoaDs. This automated system has outperformed commercially available DNA extraction kits for higher cell counts. The platform's elimination of valve requirements ensures unlimited sample incubation times and enhances reliability, making it a straightforward option for automated biological workflows, particularly in diagnostics. (73).
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Affiliation(s)
- Éadaoin Carthy
- School of Mechanical and Manufacturing Engineering, Dublin City University, Glasnevin, Dublin, Ireland; National Centre for Sensor Research (NCSR), Dublin City University, Dublin, Ireland; Biodesign Europe, Dublin City University, Dublin, Ireland.
| | - Brian Hughes
- School of Mechanical and Manufacturing Engineering, Dublin City University, Glasnevin, Dublin, Ireland
| | - Eimear Higgins
- School of Mechanical and Manufacturing Engineering, Dublin City University, Glasnevin, Dublin, Ireland
| | - Phil Early
- School of Mechanical and Manufacturing Engineering, Dublin City University, Glasnevin, Dublin, Ireland
| | - Cian Merne
- School of Mechanical and Manufacturing Engineering, Dublin City University, Glasnevin, Dublin, Ireland
| | - Darren Walsh
- School of Biotechnology, Dublin City University, Glasnevin, Dublin, Ireland
| | - Anne Parle-McDermott
- National Centre for Sensor Research (NCSR), Dublin City University, Dublin, Ireland; School of Biotechnology, Dublin City University, Glasnevin, Dublin, Ireland
| | - David J Kinahan
- School of Mechanical and Manufacturing Engineering, Dublin City University, Glasnevin, Dublin, Ireland; National Centre for Sensor Research (NCSR), Dublin City University, Dublin, Ireland; Biodesign Europe, Dublin City University, Dublin, Ireland
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Early PL, Kilcawley NA, McArdle NA, Renou M, Kearney SM, Mishra R, Dimov N, Glynn MT, Ducrée J, Kinahan DJ. Digital process control of multi-step assays on centrifugal platforms using high-low-high rotational-pulse triggered valving. PLoS One 2023; 18:e0291165. [PMID: 37682949 PMCID: PMC10490917 DOI: 10.1371/journal.pone.0291165] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2023] [Accepted: 08/23/2023] [Indexed: 09/10/2023] Open
Abstract
Due to their capability for comprehensive sample-to-answer automation, the interest in centrifugal microfluidic systems has greatly increased in industry and academia over the last quarter century. The main applications of these "Lab-on-a-Disc" (LoaD) platforms are in decentralised bioanalytical point-of-use / point-of-care testing. Due to the unidirectional and omnipresent nature of the centrifugal force, advanced flow control is key to coordinate multi-step / multi-reagent assay formats on the LoaD. Formerly, flow control was often achieved by capillary burst valves which require gradual increments of the spin speed of the system-innate spindle motor. Recent advanced introduced a flow control scheme called 'rotational pulse actuated valves'. In these valves the sequence of valve actuation is determined by the architecture of the disc while actuation is triggered by freely programmable upward spike (i.e. Low-High-Low (LHL)) in the rotational frequency. This paradigm shift from conventional 'analogue' burst valves to 'digital' pulsing significantly increases the number of sequential while also improving the overall robustness of flow control. In this work, we expand on these LHL valves by introducing High-Low-High (HLH) pulse-actuated (PA) valving which are actuated by 'downward' spike in the disc spin-rate. These HLH valves are particularly useful for high spin-rate operations such as centrifugation of blood. We introduce two different HLH architectures and then combine the most promising with LHL valves to implement the time-dependent liquid handling protocol underlying a common liver function test panel.
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Affiliation(s)
- Philip L. Early
- School of Physical Sciences, Dublin City University, Glasnevin, Dublin, Ireland
- National Centre for Sensor Research, Dublin City University, Glasnevin, Dublin, Ireland
| | - Niamh A. Kilcawley
- School of Physical Sciences, Dublin City University, Glasnevin, Dublin, Ireland
- National Centre for Sensor Research, Dublin City University, Glasnevin, Dublin, Ireland
| | - Niamh A. McArdle
- School of Physical Sciences, Dublin City University, Glasnevin, Dublin, Ireland
- National Centre for Sensor Research, Dublin City University, Glasnevin, Dublin, Ireland
| | - Marine Renou
- School of Physical Sciences, Dublin City University, Glasnevin, Dublin, Ireland
- National Centre for Sensor Research, Dublin City University, Glasnevin, Dublin, Ireland
- Telecom Physique Strasbourg, Université de Strasbourg, Strasbourg, France
| | - Sinéad M. Kearney
- School of Physical Sciences, Dublin City University, Glasnevin, Dublin, Ireland
- National Centre for Sensor Research, Dublin City University, Glasnevin, Dublin, Ireland
| | - Rohit Mishra
- School of Physical Sciences, Dublin City University, Glasnevin, Dublin, Ireland
- National Centre for Sensor Research, Dublin City University, Glasnevin, Dublin, Ireland
| | - Nikolay Dimov
- School of Physical Sciences, Dublin City University, Glasnevin, Dublin, Ireland
- National Centre for Sensor Research, Dublin City University, Glasnevin, Dublin, Ireland
| | - Macdara T. Glynn
- School of Physical Sciences, Dublin City University, Glasnevin, Dublin, Ireland
- National Centre for Sensor Research, Dublin City University, Glasnevin, Dublin, Ireland
| | - Jens Ducrée
- School of Physical Sciences, Dublin City University, Glasnevin, Dublin, Ireland
- National Centre for Sensor Research, Dublin City University, Glasnevin, Dublin, Ireland
| | - David J. Kinahan
- School of Physical Sciences, Dublin City University, Glasnevin, Dublin, Ireland
- School of Mechanical and Manufacturing Engineering, Dublin City University, Glasnevin, Dublin, Ireland
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Skaltsounis P, Kokkoris G, Papaioannou TG, Tserepi A. Closed-Loop Microreactor on PCB for Ultra-Fast DNA Amplification: Design and Thermal Validation. MICROMACHINES 2023; 14:172. [PMID: 36677232 PMCID: PMC9860919 DOI: 10.3390/mi14010172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Revised: 01/04/2023] [Accepted: 01/04/2023] [Indexed: 06/17/2023]
Abstract
Polymerase chain reaction (PCR) is the most common method used for nucleic acid (DNA) amplification. The development of PCR-performing microfluidic reactors (μPCRs) has been of major importance, due to their crucial role in pathogen detection applications in medical diagnostics. Closed loop (CL) is an advantageous type of μPCR, which uses a circular microchannel, thus allowing the DNA sample to pass consecutively through the different temperature zones, in order to accomplish a PCR cycle. CL μPCR offers the main advantages of the traditional continuous-flow μPCR, eliminating at the same time most of the disadvantages associated with the long serpentine microchannel. In this work, the performance of three different CL μPCRs designed for fabrication on a printed circuit board (PCB) was evaluated by a computational study in terms of the residence time in each thermal zone. A 3D heat transfer model was used to calculate the temperature distribution in the microreactor, and the residence times were extracted by this distribution. The results of the computational study suggest that for the best-performing microreactor design, a PCR of 30 cycles can be achieved in less than 3 min. Subsequently, a PCB chip was fabricated based on the design that performed best in the computational study. PCB constitutes a great substrate as it allows for integrated microheaters inside the chip, permitting at the same time low-cost, reliable, reproducible, and mass-amenable fabrication. The fabricated chip, which, at the time of this writing, is the first CL μPCR chip fabricated on a PCB, was tested by measuring the temperatures on its surface with a thermal camera. These results were then compared with the ones of the computational study, in order to evaluate the reliability of the latter. The comparison of the calculated temperatures with the measured values verifies the accuracy of the developed model of the microreactor. As a result of that, a total power consumption of 1.521 W was experimentally measured, only ~7.3% larger than the one calculated (1.417 W). Full validation of the realized CL μPCR chip will be demonstrated in future work.
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Affiliation(s)
- Panagiotis Skaltsounis
- Institute of Nanoscience and Nanotechnology, National Center of Scientific Research (NCSR) “Demokritos”, Patr. Gregoriou Ε’ and 27 Neapoleos Str., 15341 Aghia Paraskevi, Greece
- School of Medicine, National and Kapodistrian University of Athens (NKUA), 75 Mikras Asias Str., 11527 Athens, Greece
| | - George Kokkoris
- Institute of Nanoscience and Nanotechnology, National Center of Scientific Research (NCSR) “Demokritos”, Patr. Gregoriou Ε’ and 27 Neapoleos Str., 15341 Aghia Paraskevi, Greece
| | - Theodoros G. Papaioannou
- School of Medicine, National and Kapodistrian University of Athens (NKUA), 75 Mikras Asias Str., 11527 Athens, Greece
| | - Angeliki Tserepi
- Institute of Nanoscience and Nanotechnology, National Center of Scientific Research (NCSR) “Demokritos”, Patr. Gregoriou Ε’ and 27 Neapoleos Str., 15341 Aghia Paraskevi, Greece
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7
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Shi Y, Ye P, Yang K, Meng J, Guo J, Pan Z, Zhao W, Guo J. Application of centrifugal microfluidics in immunoassay, biochemical analysis and molecular diagnosis. Analyst 2021; 146:5800-5821. [PMID: 34570846 DOI: 10.1039/d1an00629k] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Rapid diagnosis plays a vital role in daily life and is effective in reducing treatment costs and increasing curability, especially in remote areas with limited availability of resources. Among the various common methods of rapid diagnosis, centrifugal microfluidics has many unique advantages, such as less sample consumption, more precise valve control for sequential loading of samples, and accurately separated module design in a microfluidic network to minimize cross-contamination. Therefore, in recent years, centrifugal microfluidics has been extensively researched, and it has been found to play important roles in biology, chemistry, and medicine. Here, we review the latest developments in centrifugal microfluidic platforms in immunoassays, biochemical analyses, and molecular diagnosis, in recent years. In immunoassays, we focus on the application of enzyme-linked immunosorbent assay (ELISA); in biochemical analysis, we introduce the application of plasma and blood cell separation; and in molecular diagnosis, we highlight the application of nucleic acid amplification tests. Additionally, we discuss the characteristics of the methods under each platform as well as the enhancement of the corresponding performance parameters, such as the limit of detection, separation efficiency, etc. Finally, we discuss the limitations associated with the existing applications and potential breakthroughs that can be achieved in this field in the future.
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Affiliation(s)
- Yuxing Shi
- School of Automation Engineering, University of Electronic Science and Technology of China, Chengdu 611731, China.
| | - Peng Ye
- School of Automation Engineering, University of Electronic Science and Technology of China, Chengdu 611731, China.
| | - Kuojun Yang
- School of Automation Engineering, University of Electronic Science and Technology of China, Chengdu 611731, China.
| | - Jie Meng
- School of Automation Engineering, University of Electronic Science and Technology of China, Chengdu 611731, China.
| | - Jiuchuan Guo
- School of Automation Engineering, University of Electronic Science and Technology of China, Chengdu 611731, China.
| | - Zhixiang Pan
- School of Automation Engineering, University of Electronic Science and Technology of China, Chengdu 611731, China.
| | - Wenhao Zhao
- School of Automation Engineering, University of Electronic Science and Technology of China, Chengdu 611731, China.
| | - Jinhong Guo
- School of Information and Communication Engineering, University of Electronic Science and Technology of China, Chengdu 611731, China.
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Abstract
Lab-on-a-Disc (LoaD) biosensors are increasingly a promising solution for many biosensing applications. In the search for a perfect match between point-of-care (PoC) microfluidic devices and biosensors, the LoaD platform has the potential to be reliable, sensitive, low-cost, and easy-to-use. The present global pandemic draws attention to the importance of rapid sample-to-answer PoC devices for minimising manual intervention and sample manipulation, thus increasing the safety of the health professional while minimising the chances of sample contamination. A biosensor is defined by its ability to measure an analyte by converting a biological binding event to tangible analytical data. With evolving manufacturing processes for both LoaDs and biosensors, it is becoming more feasible to embed biosensors within the platform and/or to pair the microfluidic cartridges with low-cost detection systems. This review considers the basics of the centrifugal microfluidics and describes recent developments in common biosensing methods and novel technologies for fluidic control and automation. Finally, an overview of current devices on the market is provided. This review will guide scientists who want to initiate research in LoaD PoC devices as well as providing valuable reference material to researchers active in the field.
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9
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Ji M, Xia Y, Loo JFC, Li L, Ho HP, He J, Gu D. Automated multiplex nucleic acid tests for rapid detection of SARS-CoV-2, influenza A and B infection with direct reverse-transcription quantitative PCR (dirRT-qPCR) assay in a centrifugal microfluidic platform. RSC Adv 2020; 10:34088-34098. [PMID: 35519051 PMCID: PMC9056731 DOI: 10.1039/d0ra04507a] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Accepted: 09/06/2020] [Indexed: 12/24/2022] Open
Abstract
The coronavirus disease 2019 (COVID-19) pandemic, caused by the new severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus, has posed a threat to public health worldwide. Also, influenza virus has caused a large number of deaths annually. Since co-infection of SARS-CoV-2 and influenza virus, which share similar symptoms, hampers current treatment efficiency, multiple simultaneous detection of these viruses is needed to provide the right treatment for patients. We developed a microfluidic disc-direct RT-qPCR (dirRT-qPCR) assay for rapid multiplex detection of SARS-CoV-2, influenza A and B viral infection in pharyngeal swab samples in an automated manner. Choices of the DNA polymerase, concentrations of dTPs and MgCl2 were characterized to optimize the assay. A detection limit of 2 × 101 copies per reaction was found in all three viral RNAs with as little as 2 μL of swab samples. The accuracy of our assay was evaluated with 2127 clinical swab samples of infection with these three viruses and healthy controls, and it possessed a consistency rate of 100, 99.54 and 99.25% in SARS-CoV-2, influenza A and B detection in comparison to standard RT-qPCR. The reported scheme of our assay is capable of screening other viral infections for up to 16 targets simultaneously. The whole diagnosis could be completed in 1.5 hours after simple sample loading by a non-technical expert. This constitutes an enabling strategy for large-scale point-of-care screening of multiple viral infections, which ultimately lead to a pathway for resolving the critical issue of early diagnosis for the prevention and control of viral outbreaks.
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Affiliation(s)
- Minghui Ji
- School of Nursing, Nanjing Medical University Nanjing 211166 P. R. China
| | - Yun Xia
- Shenzhen International Travel Health Care Center, Shenzhen Academy of Inspection and Quarantine Shenzhen Customs District Shenzhen 518033 P. R. China
| | - Jacky Fong-Chuen Loo
- Department of Biomedical Engineering, The Chinese University of Hong Kong Hong Kong SAR P. R. China
| | - Lang Li
- Shenzhen Bao'an Traditional Chinese Medicine Hospital (Group), Guangzhou University of Chinese Medicine Shenzhen 518133 P. R. China
| | - Ho-Pui Ho
- Department of Biomedical Engineering, The Chinese University of Hong Kong Hong Kong SAR P. R. China
| | - Jianan He
- Shenzhen International Travel Health Care Center, Shenzhen Academy of Inspection and Quarantine Shenzhen Customs District Shenzhen 518033 P. R. China
| | - Dayong Gu
- Department of Laboratory Medicine, Shenzhen Second People's Hospital, The First Affiliated Hospital of Shenzhen University, Health Science Center Shenzhen 518035 P. R. China
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10
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Li L, Miao B, Li Z, Sun Z, Peng N. Sample-to-Answer Hepatitis B Virus DNA Detection from Whole Blood on a Centrifugal Microfluidic Platform with Double Rotation Axes. ACS Sens 2019; 4:2738-2745. [PMID: 31502439 DOI: 10.1021/acssensors.9b01270] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
A point-of-care apparatus for hepatitis virus detection requires simple and easy-to-use processing steps and should have the same diagnostic capability as that in the central laboratory. However, no automated and efficient methods for hepatitis B virus (HBV) sample-to-answer detection include serum separation, and complete prestorage of reagents has been developed. We developed an automated sample-to-answer disc for rapid HBV detection from whole blood based on a double rotation axes centrifugal microfluidic platform. The disc with complete prestorage of reagents features fully automated and integrated serum separation from whole blood, magnetic bead-based DNA extraction, aliquoting of the nucleic acid, and real-time polymerase chain reaction. A laser diode for sequential release of prestored liquid reagents was used. Processing merely requires manual loading of the sample into the disc. We demonstrate successful sample-to-answer detection of HBV in a 500 μL whole blood sample with sample concentrations down to 102 copies/mL. The total time of the whole detection from sample-to-result is about 48 min. The disc provides a user-friendly molecular diagnostic system for rapid analysis of HBV without demanding a complicated laboratory instrument and major manual operation time. Overall, the results indicated that the developed disc could be used for HBV molecular diagnosis.
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Affiliation(s)
- Lei Li
- State Key Laboratory for Manufacturing Systems Engineering, Xi’an Jiaotong University, Xi’an 710054, Shaanxi, China
| | - Baogang Miao
- State Key Laboratory for Manufacturing Systems Engineering, Xi’an Jiaotong University, Xi’an 710054, Shaanxi, China
| | - Zheng Li
- State Key Laboratory for Manufacturing Systems Engineering, Xi’an Jiaotong University, Xi’an 710054, Shaanxi, China
| | - Zhengming Sun
- Shaanxi Provincial People’s Hospital, Xi’an 710068, Shaanxi, China
| | - Niancai Peng
- State Key Laboratory for Manufacturing Systems Engineering, Xi’an Jiaotong University, Xi’an 710054, Shaanxi, China
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11
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Lim DYS, Seo MJ, Yoo JC. Optical Temperature Control Unit and Convolutional Neural Network for Colorimetric Detection of Loop-Mediated Isothermal Amplification on a Lab-On-A-Disc Platform. SENSORS 2019; 19:s19143207. [PMID: 31330863 PMCID: PMC6679502 DOI: 10.3390/s19143207] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Revised: 07/05/2019] [Accepted: 07/17/2019] [Indexed: 12/23/2022]
Abstract
Lab-on-a-disc (LOD) has emerged as a promising candidate for a point-of-care testing (POCT) device because it can effectively integrate complex fluid manipulation steps using multiple layers of polymeric substrates. However, it is still highly challenging to design and fabricate temperature measurement and heating system in non-contact with the surface of LOD, which is a prerequisite to successful realization of DNA amplification especially with a rotatable disc. This study presents a Lab-on-a-disc (LOD)-based automatic loop-mediated isothermal amplification (LAMP) system, where a thermochromic coating (<~420 µm) was used to distantly measure the chamber’s temperature and a micro graphite film was integrated into the chamber to remotely absorb laser beam with super high efficiency. We used a deep learning network to more consistently analyze the product of LAMP than we could with the naked eye. Consequently, both temperature heating and measurement were carried out without a physical contact with the surface of LOD. The experimental results show that the proposed approach, which no previous work has attempted, was highly effective in realizing LAMP in LOD.
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Affiliation(s)
- Da Ye Seul Lim
- College of Information and Communication Engineering, Sungkyunkwan University, Suwon, Gyeonggi-Do 440-746, Korea
| | - Moo-Jung Seo
- College of Information and Communication Engineering, Sungkyunkwan University, Suwon, Gyeonggi-Do 440-746, Korea
| | - Jae Chern Yoo
- College of Information and Communication Engineering, Sungkyunkwan University, Suwon, Gyeonggi-Do 440-746, Korea.
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12
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Wang G, Tan J, Tang M, Zhang C, Zhang D, Ji W, Chen J, Ho HP, Zhang X. Binary centrifugal microfluidics enabling novel, digital addressable functions for valving and routing. LAB ON A CHIP 2018; 18:1197-1206. [PMID: 29546267 DOI: 10.1039/c8lc00026c] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Centrifugal microfluidics or lab-on-a-disc (LOAD) is a promising branch of lab-on-a-chip or microfluidics. Besides effective fluid transportation and inherently available density-based sample separation in centrifugal microfluidics, uniform actuation of flow on the disc makes the platform compact and scalable. However, the natural radially outward centrifugal force in a LOAD system limits its capacity to perform complex fluid manipulation steps. In order to increase the fluid manipulation freedom and integration capacity of the LOAD system, we propose a binary centrifugal microfluidics platform. With the help of Euler force, our platform allows free switching of both left and right states based on a rather simple mechanical structure. The periodical switching of state would provide a "clock" signal for a sequence of droplet binary logic operations. With the binary state platform and the "clock" signal, we can accurately handle the droplet separately in each time step with a maximum main frequency of about 10 S s-1 (switching per second). Apart from droplet manipulations such as droplet generation and metering, we also demonstrate a series of droplet logic operations, such as binary valving, droplet routing and digital addressable droplet storage. Furthermore, complex bioassays such as the Bradford assay and DNA purification assay are demonstrated on a binary platform, which is totally impossible for a traditional LOAD system. Our binary platform largely improves the capability for logic operation on the LOAD platform, and it is a simple and promising approach for microfluidic lab-on-a-disc large-scale integration.
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Affiliation(s)
- Guanghui Wang
- College of Engineering and Applied Sciences, Nanjing University, Jiangsu 210093, China.
| | - Jie Tan
- College of Engineering and Applied Sciences, Nanjing University, Jiangsu 210093, China.
| | - Minghui Tang
- Department of Electronic Engineering, The Chinese University of Hong Kong, Shatin, Hong Kong, P. R. China.
| | - Changbin Zhang
- Nanjing University of Chinese Medicine, Nanjing, P.R. China
| | - Dongying Zhang
- College of Engineering and Applied Sciences, Nanjing University, Jiangsu 210093, China.
| | - Wenbin Ji
- College of Engineering and Applied Sciences, Nanjing University, Jiangsu 210093, China.
| | - Junhao Chen
- Department of Clinical Laboratory, Gulou Hospital, Nanjing University, Jiangsu, China
| | - Ho-Pui Ho
- Department of Electronic Engineering, The Chinese University of Hong Kong, Shatin, Hong Kong, P. R. China.
| | - Xuping Zhang
- College of Engineering and Applied Sciences, Nanjing University, Jiangsu 210093, China.
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13
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Torres Delgado SM, Kinahan DJ, Nirupa Julius LA, Mallette A, Ardila DS, Mishra R, Miyazaki CM, Korvink JG, Ducrée J, Mager D. Wirelessly powered and remotely controlled valve-array for highly multiplexed analytical assay automation on a centrifugal microfluidic platform. Biosens Bioelectron 2018; 109:214-223. [PMID: 29567566 DOI: 10.1016/j.bios.2018.03.012] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2017] [Revised: 02/09/2018] [Accepted: 03/06/2018] [Indexed: 12/14/2022]
Abstract
In this paper we present a wirelessly powered array of 128 centrifugo-pneumatic valves that can be thermally actuated on demand during spinning. The valves can either be triggered by a predefined protocol, wireless signal transmission via Bluetooth, or in response to a sensor monitoring a parameter like the temperature, or homogeneity of the dispersion. Upon activation of a resistive heater, a low-melting membrane (Parafilm™) is removed to vent an entrapped gas pocket, thus letting the incoming liquid wet an intermediate dissolvable film and thereby open the valve. The proposed system allows up to 12 heaters to be activated in parallel, with a response time below 3 s, potentially resulting in 128 actuated valves in under 30 s. We demonstrate, with three examples of common and standard procedures, how the proposed technology could become a powerful tool for implementing diagnostic assays on Lab-on-a-Disc. First, we implement wireless actuation of 64 valves during rotation in a freely programmable sequence, or upon user input in real time. Then, we show a closed-loop centrifugal flow control sequence for which the state of mixing of reagents, evaluated from stroboscopically recorded images, triggers the opening of the valves. In our last experiment, valving and closed-loop control are used to facilitate centrifugal processing of whole blood.
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Affiliation(s)
- Saraí M Torres Delgado
- Laboratory for Simulation, Department of Microsystems Engineering (IMTEK), University of Freiburg, Georges-Koehler-Allee 103, Freiburg im Breisgau 79110, Germany; Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen 76344, Germany
| | - David J Kinahan
- FPC@DCU - Fraunhofer Project Centre for Embedded Bioanalytical Systems at Dublin City University, Glasnevin, Dublin 9, Ireland.
| | - Lourdes Albina Nirupa Julius
- FPC@DCU - Fraunhofer Project Centre for Embedded Bioanalytical Systems at Dublin City University, Glasnevin, Dublin 9, Ireland
| | - Adam Mallette
- FPC@DCU - Fraunhofer Project Centre for Embedded Bioanalytical Systems at Dublin City University, Glasnevin, Dublin 9, Ireland; Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN, United States
| | - David Sáenz Ardila
- Laboratory for Simulation, Department of Microsystems Engineering (IMTEK), University of Freiburg, Georges-Koehler-Allee 103, Freiburg im Breisgau 79110, Germany
| | - Rohit Mishra
- FPC@DCU - Fraunhofer Project Centre for Embedded Bioanalytical Systems at Dublin City University, Glasnevin, Dublin 9, Ireland
| | - Celina M Miyazaki
- FPC@DCU - Fraunhofer Project Centre for Embedded Bioanalytical Systems at Dublin City University, Glasnevin, Dublin 9, Ireland; Science and Technology Centre for Sustainability, Federal University of São Carlos, Campus Sorocaba, SP, Brazil
| | - Jan G Korvink
- Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen 76344, Germany
| | - Jens Ducrée
- FPC@DCU - Fraunhofer Project Centre for Embedded Bioanalytical Systems at Dublin City University, Glasnevin, Dublin 9, Ireland
| | - Dario Mager
- Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen 76344, Germany
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14
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Seo MJ, Yoo JC. Lab-on-a-Disc Platform for Automated Chemical Cell Lysis. SENSORS 2018; 18:s18030687. [PMID: 29495361 PMCID: PMC5876551 DOI: 10.3390/s18030687] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/12/2018] [Revised: 02/20/2018] [Accepted: 02/23/2018] [Indexed: 11/16/2022]
Abstract
Chemical cell lysis is an interesting topic in the research to Lab-on-a-Disc (LOD) platforms on account of its perfect compatibility with the centrifugal spin column format. However, standard procedures followed in chemical cell lysis require sophisticated non-contact temperature control as well as the use of pressure resistant valves. These requirements pose a significant challenge thereby making the automation of chemical cell lysis on an LOD extremely difficult to achieve. In this study, an LOD capable of performing fully automated chemical cell lysis is proposed, where a combination of chemical and thermal methods has been used. It comprises a sample inlet, phase change material sheet (PCMS)-based temperature sensor, heating chamber, and pressure resistant valves. The PCMS melts and solidifies at a certain temperature and thus is capable of indicating whether the heating chamber has reached a specific temperature. Compared to conventional cell lysis systems, the proposed system offers advantages of reduced manual labor and a compact structure that can be readily integrated onto an LOD. Experiments using Salmonella typhimurium strains were conducted to confirm the performance of the proposed cell lysis system. The experimental results demonstrate that the proposed system has great potential in realizing chemical cell lysis on an LOD whilst achieving higher throughput in terms of purity and yield of DNA thereby providing a good alternative to conventional cell lysis systems.
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Affiliation(s)
- Moo-Jung Seo
- College of Information and Communication Engineering, Sungkyunkwan University, Suwon 440-746, Korea.
| | - Jae-Chern Yoo
- College of Information and Communication Engineering, Sungkyunkwan University, Suwon 440-746, Korea.
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15
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Basha IHK, Ho ETW, Yousuff CM, Hamid NHB. Towards Multiplex Molecular Diagnosis-A Review of Microfluidic Genomics Technologies. MICROMACHINES 2017; 8:E266. [PMID: 30400456 PMCID: PMC6190060 DOI: 10.3390/mi8090266] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/15/2017] [Revised: 06/30/2017] [Accepted: 07/16/2017] [Indexed: 12/21/2022]
Abstract
Highly sensitive and specific pathogen diagnosis is essential for correct and timely treatment of infectious diseases, especially virulent strains, in people. Point-of-care pathogen diagnosis can be a tremendous help in managing disease outbreaks as well as in routine healthcare settings. Infectious pathogens can be identified with high specificity using molecular methods. A plethora of microfluidic innovations in recent years have now made it increasingly feasible to develop portable, robust, accurate, and sensitive genomic diagnostic devices for deployment at the point of care. However, improving processing time, multiplexed detection, sensitivity and limit of detection, specificity, and ease of deployment in resource-limited settings are ongoing challenges. This review outlines recent techniques in microfluidic genomic diagnosis and devices with a focus on integrating them into a lab on a chip that will lead towards the development of multiplexed point-of-care devices of high sensitivity and specificity.
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Affiliation(s)
- Ismail Hussain Kamal Basha
- Department of Electrical and Electronic Engineering, Universiti Teknologi PETRONAS, 32610 Seri Iskandar, Perak Darul Ridzuan, Malaysia.
| | - Eric Tatt Wei Ho
- Department of Electrical and Electronic Engineering, Universiti Teknologi PETRONAS, 32610 Seri Iskandar, Perak Darul Ridzuan, Malaysia.
| | - Caffiyar Mohamed Yousuff
- Department of Electrical and Electronic Engineering, Universiti Teknologi PETRONAS, 32610 Seri Iskandar, Perak Darul Ridzuan, Malaysia.
| | - Nor Hisham Bin Hamid
- Department of Electrical and Electronic Engineering, Universiti Teknologi PETRONAS, 32610 Seri Iskandar, Perak Darul Ridzuan, Malaysia.
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16
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Zhu Y, Chen Y, Meng X, Wang J, Lu Y, Xu Y, Cheng J. Comprehensive Study of the Flow Control Strategy in a Wirelessly Charged Centrifugal Microfluidic Platform with Two Rotation Axes. Anal Chem 2017; 89:9315-9321. [PMID: 28764326 DOI: 10.1021/acs.analchem.7b02080] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Centrifugal microfluidics has been widely applied in the sample-in-answer-out systems for the analyses of nucleic acids, proteins, and small molecules. However, the inherent characteristic of unidirectional fluid propulsion limits the flexibility of these fluidic chips. Providing an extra degree of freedom to allow the unconstrained and reversible pumping of liquid is an effective strategy to address this limitation. In this study, a wirelessly charged centrifugal microfluidic platform with two rotation axes has been constructed and the flow control strategy in such platform with two degrees of freedom was comprehensively studied for the first time. Inductively coupled coils are installed on the platform to achieve wireless power transfer to the spinning stage. A micro servo motor is mounted on both sides of the stage to alter the orientation of the device around a secondary rotation axis on demand during stage rotation. The basic liquid operations on this platform, including directional transport of liquid, valving, metering, and mixing, are comprehensively studied and realized. Finally, a chip for the simultaneous determination of hexavalent chromium [Cr(VI)] and methanal in water samples is designed and tested based on the strategy presented in this paper, demonstrating the potential use of this platform for on-site environmental monitoring, food safety testing, and other life science applications.
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Affiliation(s)
- Yunzeng Zhu
- Department of Biomedical Engineering, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Tsinghua University School of Medicine , Beijing 100084, China
| | - Yiqi Chen
- Department of Biomedical Engineering, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Tsinghua University School of Medicine , Beijing 100084, China
| | - Xiangrui Meng
- Department of Biomedical Engineering, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Tsinghua University School of Medicine , Beijing 100084, China
| | - Jing Wang
- Department of Biomedical Engineering, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Tsinghua University School of Medicine , Beijing 100084, China
| | - Ying Lu
- Department of Biomedical Engineering, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Tsinghua University School of Medicine , Beijing 100084, China
| | - Youchun Xu
- Department of Biomedical Engineering, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Tsinghua University School of Medicine , Beijing 100084, China
| | - Jing Cheng
- Department of Biomedical Engineering, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Tsinghua University School of Medicine , Beijing 100084, China.,National Engineering Research Center for Beijing Biochip Technology , Beijing 102206, China
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17
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McArdle H, Jimenez-Mateos EM, Raoof R, Carthy E, Boyle D, ElNaggar H, Delanty N, Hamer H, Dogan M, Huchtemann T, Kӧrtvelyessy P, Rosenow F, Forster RJ, Henshall DC, Spain E. "TORNADO" - Theranostic One-Step RNA Detector; microfluidic disc for the direct detection of microRNA-134 in plasma and cerebrospinal fluid. Sci Rep 2017; 7:1750. [PMID: 28496112 PMCID: PMC5431952 DOI: 10.1038/s41598-017-01947-2] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2017] [Accepted: 04/05/2017] [Indexed: 11/25/2022] Open
Abstract
Diagnosis of seizure disorders such as epilepsy currently relies on clinical examination and electroencephalogram recordings and is associated with substantial mis-diagnosis. The miRNA, miR-134 (MIR134 in humans), has been found to be elevated in brain tissue after experimental status epilepticus and in human epilepsy cells and their detection in biofluids may serve as unique biomarkers. miRNAs from unprocessed human plasma and human cerebrospinal fluid samples were used in a novel electrochemical detection based on electrocatalytic platinum nanoparticles inside a centrifugal microfluidic device where the sandwich assay is formed using an event triggered release system, suitable for the rapid point-of-care detection of low abundance biomarkers of disease. The device has the advantage of controlling the rotation speed of the centrifugal device to pump nanoliter volumes of fluid at a set time and manipulate the transfer of liquids within the device. The centrifugal platform improves reaction rates and yields by proposing efficient mixing strategies to overcome diffusion-limited processes and improve mass transport rates, resulting in reduced hybridization times with a limit of detection of 1 pM target concentration. Plasma and cerebrospinal fluid samples (unprocessed) from patients with epilepsy or who experienced status epilepticus were tested and the catalytic response obtained was in range of the calibration plot. This study demonstrates a rapid and simple detection for epilepsy biomarkers in biofluid.
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Affiliation(s)
- Hazel McArdle
- School of Chemical Sciences, National Centre for Sensor Research, Dublin City University, Dublin 9, Ireland
| | - Eva M Jimenez-Mateos
- Department of Physiology and Medical Physics, Royal College of Surgeons in Ireland, Dublin 2, Ireland
| | - Rana Raoof
- Department of Physiology and Medical Physics, Royal College of Surgeons in Ireland, Dublin 2, Ireland
| | - Eadaoin Carthy
- School of Chemical Sciences, National Centre for Sensor Research, Dublin City University, Dublin 9, Ireland
| | - David Boyle
- School of Chemical Sciences, National Centre for Sensor Research, Dublin City University, Dublin 9, Ireland
| | - Hany ElNaggar
- Department of Physiology and Medical Physics, Royal College of Surgeons in Ireland, Dublin 2, Ireland
- Neurological Services, Beaumont Hospital, Dublin 9, Ireland
| | - Norman Delanty
- Neurological Services, Beaumont Hospital, Dublin 9, Ireland
| | - Hajo Hamer
- University Hospital Erlangen, Schwabachanlage 6, 91054, Erlangen, Germany
| | - Muejgdan Dogan
- University Hospital Erlangen, Schwabachanlage 6, 91054, Erlangen, Germany
| | - Tessa Huchtemann
- Department of Neurology, University hospital Magdeburg, Leipziger Strasse 44, 39120, Magdeburg, Germany
- German Center for Neurodegenerative Diseases (DZNE), Magdeburg, Leipziger Strasse 44, 39120, Magdeburg, Germany
| | - Peter Kӧrtvelyessy
- Department of Neurology, University hospital Magdeburg, Leipziger Strasse 44, 39120, Magdeburg, Germany
- German Center for Neurodegenerative Diseases (DZNE), Magdeburg, Leipziger Strasse 44, 39120, Magdeburg, Germany
| | - Felix Rosenow
- Epilepsy Center Hessen, Department of Neurology, Baldingerstr, 35043, Marburg, Germany
- Epilepsy Center Frankfurt Rhine-Main, Neurocenter, Goethe-University, Schleusenweg 2-16, Haus 95, 60528, Frankfurt a.M., Germany
| | - Robert J Forster
- School of Chemical Sciences, National Centre for Sensor Research, Dublin City University, Dublin 9, Ireland
| | - David C Henshall
- Department of Physiology and Medical Physics, Royal College of Surgeons in Ireland, Dublin 2, Ireland
| | - Elaine Spain
- School of Chemical Sciences, National Centre for Sensor Research, Dublin City University, Dublin 9, Ireland.
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18
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Abstract
The tools available for both infectious disease diagnostics and human identity testing have benefitted from major technological advances in the automation of nucleic acid purification, amplification, and detection methods. The seamless integration of these processes into a fully automated microscale format has led to the development of rapid, user-friendly sample-to-answer assay systems. The application of these systems for human identity testing allows for DNA profiles to be generated in a field-forward environment where they can be used to generate investigative leads in crimes or other actionable intelligence. When used for infectious disease diagnostics, the sensitivity and specificity of these assay systems meets or exceeds that of more conventional strategies for the detection of respiratory, gastrointestinal, nervous system, and sexually transmitted pathogens. The anticipated medical benefits of this technology include shorter hospital stays, the elimination of unnecessary or ineffectual treatment, improved patient outcomes, and an overall quantifiable reduction in healthcare costs.
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19
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Ahrberg CD, Manz A, Chung BG. Polymerase chain reaction in microfluidic devices. LAB ON A CHIP 2016; 16:3866-3884. [PMID: 27713993 DOI: 10.1039/c6lc00984k] [Citation(s) in RCA: 155] [Impact Index Per Article: 17.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
The invention of the polymerase chain reaction (PCR) has caused a revolution in molecular biology, giving access to a method of amplifying deoxyribonucleic acid (DNA) molecules across several orders of magnitude. Since the first application of PCR in a microfluidic device was developed in 1998, an increasing number of researchers have continued the development of microfluidic PCR systems. In this review, we introduce recent developments in microfluidic-based space and time domain devices as well as discuss various designs integrated with multiple functions for sample preparation and detection. The development of isothermal nucleic acid amplification and digital PCR microfluidic devices within the last five years is also highlighted. Furthermore, we introduce various commercial microfluidic PCR devices.
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Affiliation(s)
| | - Andreas Manz
- Microfluidics group, KIST-Europe, Saarbrücken, Germany and Mechanotronics Department, Universität des Saarlandes, Saarbrücken, Germany
| | - Bong Geun Chung
- Department of Mechanical Engineering, Sogang University, Seoul, Korea.
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20
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Bissonnette L, Bergeron MG. The GenePOC Platform, a Rational Solution for Extreme Point-of-Care Testing. MICROMACHINES 2016; 7:E94. [PMID: 30404270 PMCID: PMC6189873 DOI: 10.3390/mi7060094] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/19/2016] [Revised: 05/06/2016] [Accepted: 05/17/2016] [Indexed: 01/02/2023]
Abstract
Extreme point-of-care (POC) testing for infections, as performed (endured) in low-resource settings, developing countries, tropical areas, or in conditions following emergency crises or natural disasters, must be undertaken under environmental, logistic, and societal conditions which impose a significant deal of stress on local human populations and healthcare providers. For disease diagnostics or management, simple and robust biomedical equipment and reagents are required and needed. This chapter aims to overview some of these stresses (requirements) and intends to describe some of the solutions already engineered at the heart of centripetal (centrifugal) microfluidic platforms such as that of GenePOC Inc. to enable rapid, robust, and reproducible nucleic acid-based diagnostics of infectious diseases, to better control the morbidity and mortality of infections and the expanding threat posed by antimicrobial resistance.
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Affiliation(s)
- Luc Bissonnette
- Centre de recherche en infectiologie de l'Université Laval, Axe maladies infectieuses et immunitaires, Centre de recherche du CHU de Québec-Université Laval, Québec City, QC G1V 4G2, Canada.
- Département de microbiologie-infectiologie et d'immunologie, Faculté de médecine, Université Laval, Québec City, QC G1V 0A6, Canada.
| | - Michel G Bergeron
- Centre de recherche en infectiologie de l'Université Laval, Axe maladies infectieuses et immunitaires, Centre de recherche du CHU de Québec-Université Laval, Québec City, QC G1V 4G2, Canada.
- Département de microbiologie-infectiologie et d'immunologie, Faculté de médecine, Université Laval, Québec City, QC G1V 0A6, Canada.
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21
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Cao X, deMello AJ, Elvira KS. Enhanced versatility of fluid control in centrifugal microfluidic platforms using two degrees of freedom. LAB ON A CHIP 2016; 16:1197-205. [PMID: 26931603 DOI: 10.1039/c5lc01530h] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Centrifugal microfluidic platforms have significant potential in commercial applications because of their operational flexibility and minimal external infrastructure requirements. However, the dynamic and real-time control of fluid flow within traditional centrifugal microfluidic platforms is problematic. To address this significant limitation, we propose a two degrees of freedom platform, in which a digital servo is located at each end of an arm driven by a motor. This allows for reversible inward pumping between multiple chambers with perfect efficiency. Furthermore, the addition of a second degree of freedom allows position-based pressure controlled burst valves to be accessed and operated in an independent fashion. To demonstrate the efficacy of this technical innovation, we show rapid and configurable flow switching between three target chambers within a centrifugal microfluidic device.
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Affiliation(s)
- Xiaobao Cao
- Department of Chemistry and Applied Biosciences, Institute of Chemical and Bioengineering, ETH Zürich, 8093 Zürich, Switzerland.
| | - A J deMello
- Department of Chemistry and Applied Biosciences, Institute of Chemical and Bioengineering, ETH Zürich, 8093 Zürich, Switzerland.
| | - K S Elvira
- Department of Chemistry and Applied Biosciences, Institute of Chemical and Bioengineering, ETH Zürich, 8093 Zürich, Switzerland.
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22
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Tang M, Wang G, Kong SK, Ho HP. A Review of Biomedical Centrifugal Microfluidic Platforms. MICROMACHINES 2016; 7:E26. [PMID: 30407398 PMCID: PMC6190084 DOI: 10.3390/mi7020026] [Citation(s) in RCA: 93] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/18/2015] [Accepted: 02/03/2016] [Indexed: 12/14/2022]
Abstract
Centrifugal microfluidic or lab-on-a-disc platforms have many advantages over other microfluidic systems. These advantages include a minimal amount of instrumentation, the efficient removal of any disturbing bubbles or residual volumes, and inherently available density-based sample transportation and separation. Centrifugal microfluidic devices applied to biomedical analysis and point-of-care diagnostics have been extensively promoted recently. This paper presents an up-to-date overview of these devices. The development of biomedical centrifugal microfluidic platforms essentially covers two categories: (i) unit operations that perform specific functionalities, and (ii) systems that aim to address certain biomedical applications. With the aim to provide a comprehensive representation of current development in this field, this review summarizes progress in both categories. The advanced unit operations implemented for biological processing include mixing, valving, switching, metering and sequential loading. Depending on the type of sample to be used in the system, biomedical applications are classified into four groups: nucleic acid analysis, blood analysis, immunoassays, and other biomedical applications. Our overview of advanced unit operations also includes the basic concepts and mechanisms involved in centrifugal microfluidics, while on the other hand an outline on reported applications clarifies how an assembly of unit operations enables efficient implementation of various types of complex assays. Lastly, challenges and potential for future development of biomedical centrifugal microfluidic devices are discussed.
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Affiliation(s)
- Minghui Tang
- Department of Electronic Engineering, The Chinese University of Hong Kong, Shatin, Hong Kong, China.
| | - Guanghui Wang
- Institute of Optical Communication Engineering, Nanjing University, Jiangsu 210009, China.
| | - Siu-Kai Kong
- School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong, China.
| | - Ho-Pui Ho
- Department of Electronic Engineering, The Chinese University of Hong Kong, Shatin, Hong Kong, China.
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