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Zhu H, Wu Y, Yang G, Song R, Yu J, Zhang J. Electronic Nose Drift Suppression Based on Smooth Conditional Domain Adversarial Networks. SENSORS (BASEL, SWITZERLAND) 2024; 24:1319. [PMID: 38400477 PMCID: PMC10892276 DOI: 10.3390/s24041319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 01/31/2024] [Accepted: 02/12/2024] [Indexed: 02/25/2024]
Abstract
Anti-drift is a new and serious challenge in the field related to gas sensors. Gas sensor drift causes the probability distribution of the measured data to be inconsistent with the probability distribution of the calibrated data, which leads to the failure of the original classification algorithm. In order to make the probability distributions of the drifted data and the regular data consistent, we introduce the Conditional Adversarial Domain Adaptation Network (CDAN)+ Sharpness Aware Minimization (SAM) optimizer-a state-of-the-art deep transfer learning method.The core approach involves the construction of feature extractors and domain discriminators designed to extract shared features from both drift and clean data. These extracted features are subsequently input into a classifier, thereby amplifying the overall model's generalization capabilities. The method boasts three key advantages: (1) Implementation of semi-supervised learning, thereby negating the necessity for labels on drift data. (2) Unlike conventional deep transfer learning methods such as the Domain-adversarial Neural Network (DANN) and Wasserstein Domain-adversarial Neural Network (WDANN), it accommodates inter-class correlations. (3) It exhibits enhanced ease of training and convergence compared to traditional deep transfer learning networks. Through rigorous experimentation on two publicly available datasets, we substantiate the efficiency and effectiveness of our proposed anti-drift methodology when juxtaposed with state-of-the-art techniques.
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Affiliation(s)
| | | | | | | | | | - Jianwei Zhang
- School of Control Science and Engineering, Dalian University of Technology, Dalian 116000, China; (H.Z.); (Y.W.); (G.Y.); (R.S.); (J.Y.)
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2
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Martin JDM, Claudia F, Romain AC. How well does your e-nose detect cancer? Application of artificial breath analysis for performance assessment. J Breath Res 2024; 18:026002. [PMID: 38211310 DOI: 10.1088/1752-7163/ad1d64] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2023] [Accepted: 01/11/2024] [Indexed: 01/13/2024]
Abstract
Comparing electronic nose (e-nose) performance is a challenging task because of a lack of standardised method. This paper proposes a method for defining and quantifying an indicator of the effectiveness of multi-sensor systems in detecting cancers by artificial breath analysis. To build this method, an evaluation of the performances of an array of metal oxide sensors built for use as a lung cancer screening tool was conducted. Breath from 20 healthy volunteers has been sampled in fluorinated ethylene propylene sampling bags. These healthy samples were analysed with and without the addition of nine volatile organic compound (VOC) cancer biomarkers, chosen from literature. The concentration of the VOC added was done in increasing amounts. The more VOC were added, the better the discrimination between 'healthy' samples (breath without additives) and 'cancer' samples (breath with additives) was. By determining at which level of concentration the e-nose fails to reliably discriminate between the two groups, we estimate its ability to well predict the presence of the disease or not in a realistic situation. In this work, a home-made e-nose is put to the test. The results underline that the biomarkers need to be about 5.3 times higher in concentration than in real breath for the home-made nose to tell the difference between groups with a sufficient confidence.
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Affiliation(s)
- Justin D M Martin
- Department of Environmental Sciences, Sensing of Atmospheres and Monitoring (SAM), SPHERES Research Unit, University of Liège, 6700 Arlon, Belgium
| | - Falzone Claudia
- Department of Environmental Sciences, Sensing of Atmospheres and Monitoring (SAM), SPHERES Research Unit, University of Liège, 6700 Arlon, Belgium
| | - Anne-Claude Romain
- Department of Environmental Sciences, Sensing of Atmospheres and Monitoring (SAM), SPHERES Research Unit, University of Liège, 6700 Arlon, Belgium
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Dalis C, Mesfin FM, Manohar K, Liu J, Shelley WC, Brokaw JP, Markel TA. Volatile Organic Compound Assessment as a Screening Tool for Early Detection of Gastrointestinal Diseases. Microorganisms 2023; 11:1822. [PMID: 37512994 PMCID: PMC10385474 DOI: 10.3390/microorganisms11071822] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 07/13/2023] [Accepted: 07/13/2023] [Indexed: 07/30/2023] Open
Abstract
Gastrointestinal (GI) diseases have a high prevalence throughout the United States. Screening and diagnostic modalities are often expensive and invasive, and therefore, people do not utilize them effectively. Lack of proper screening and diagnostic assessment may lead to delays in diagnosis, more advanced disease at the time of diagnosis, and higher morbidity and mortality rates. Research on the intestinal microbiome has demonstrated that dysbiosis, or unfavorable alteration of organismal composition, precedes the onset of clinical symptoms for various GI diseases. GI disease diagnostic research has led to a shift towards non-invasive methods for GI screening, including chemical-detection tests that measure changes in volatile organic compounds (VOCs), which are the byproducts of bacterial metabolism that result in the distinct smell of stool. Many of these tools are expensive, immobile benchtop instruments that require highly trained individuals to interpret the results. These attributes make them difficult to implement in clinical settings. Alternatively, electronic noses (E-noses) are relatively cheaper, handheld devices that utilize multi-sensor arrays and pattern recognition technology to analyze VOCs. The purpose of this review is to (1) highlight how dysbiosis impacts intestinal diseases and how VOC metabolites can be utilized to detect alterations in the microbiome, (2) summarize the available VOC analytical platforms that can be used to detect aberrancies in intestinal health, (3) define the current technological advancements and limitations of E-nose technology, and finally, (4) review the literature surrounding several intestinal diseases in which headspace VOCs can be used to detect or predict disease.
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Affiliation(s)
- Costa Dalis
- Department of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - Fikir M Mesfin
- Department of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - Krishna Manohar
- Department of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - Jianyun Liu
- Department of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - W Christopher Shelley
- Department of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - John P Brokaw
- Department of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - Troy A Markel
- Department of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA
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Li X, Guo J, Xu W, Cao J. Optimization of the Mixed Gas Detection Method Based on Neural Network Algorithm. ACS Sens 2023; 8:822-828. [PMID: 36701636 DOI: 10.1021/acssensors.2c02450] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Real-time mixed gas detection has attracted significant interest for being a key factor for applications of the electronic nose (E-nose). However, mixed gas detection still faces the challenge of long detection time and a large amount of training data. Therefore, in this work, we propose a feasible way to realize low-cost fast detection of mixed gases, which uses only the part response data of the adsorption process as the training set. Our results indicated that the proposed method significantly reduced the number of training sets and the prediction time of mixed gas. Moreover, it can achieve new concentration prediction of mixed gas using only the response data of the first 10 s, and the training set proportion can reduce to 60%. In addition, the convolutional neural network model can realize both the smaller training set but also the higher accuracy of mixed gas. Our findings provide an effective way to improve the detection efficiency and accuracy of E-noses for the experimental measurement.
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Affiliation(s)
- Xiulei Li
- Department of Physics & Hunan Institute of Advanced Sensing and Information Technology, Xiangtan University, Xiangtan411105, PR China
| | - Jiayi Guo
- Department of Physics & Hunan Institute of Advanced Sensing and Information Technology, Xiangtan University, Xiangtan411105, PR China
| | - Wangping Xu
- Department of Physics & Hunan Institute of Advanced Sensing and Information Technology, Xiangtan University, Xiangtan411105, PR China
| | - Juexian Cao
- Department of Physics & Hunan Institute of Advanced Sensing and Information Technology, Xiangtan University, Xiangtan411105, PR China
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5
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Subspace alignment based on an extreme learning machine for electronic nose drift compensation. Knowl Based Syst 2022. [DOI: 10.1016/j.knosys.2021.107664] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Zhan X, Long H, Gou F, Duan X, Kong G, Wu J. A Convolutional Neural Network-Based Intelligent Medical System with Sensors for Assistive Diagnosis and Decision-Making in Non-Small Cell Lung Cancer. SENSORS 2021; 21:s21237996. [PMID: 34884000 PMCID: PMC8659811 DOI: 10.3390/s21237996] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Revised: 11/26/2021] [Accepted: 11/28/2021] [Indexed: 12/15/2022]
Abstract
In many regions of the world, early diagnosis of non-small cell lung cancer (NSCLC) is a major challenge due to the large population and lack of medical resources, which is difficult toeffectively address via limited physician manpower alone. Therefore, we developed a convolutional neural network (CNN)-based assisted diagnosis and decision-making intelligent medical system with sensors. This system analyzes NSCLC patients' medical records using sensors to assist staging a diagnosis and provides recommended treatment plans to physicians. To address the problem of unbalanced case samples across pathological stages, we used transfer learning and dynamic sampling techniques to reconstruct and iteratively train the model to improve the accuracy of the prediction system. In this paper, all data for training and testing the system were obtained from the medical records of 2,789,675 patients with NSCLC, which were recorded in three hospitals in China over a five-year period. When the number of case samples reached 8000, the system achieved an accuracy rate of 0.84, which is already close to that of the doctors (accuracy: 0.86). The experimental results proved that the system can quickly and accurately analyze patient data and provide decision information support for physicians.
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Affiliation(s)
- Xiangbing Zhan
- State Key Laboratory of Public Big Data, College of Computer Science and Technology, Guizhou University, Guiyang 550025, China; (X.Z.); (X.D.); (G.K.)
| | - Huiyun Long
- State Key Laboratory of Public Big Data, College of Computer Science and Technology, Guizhou University, Guiyang 550025, China; (X.Z.); (X.D.); (G.K.)
- Correspondence: (H.L.); (J.W.)
| | - Fangfang Gou
- School of Computer Science and Engineering, Central South University, Changsha 410083, China;
| | - Xun Duan
- State Key Laboratory of Public Big Data, College of Computer Science and Technology, Guizhou University, Guiyang 550025, China; (X.Z.); (X.D.); (G.K.)
| | - Guangqian Kong
- State Key Laboratory of Public Big Data, College of Computer Science and Technology, Guizhou University, Guiyang 550025, China; (X.Z.); (X.D.); (G.K.)
| | - Jia Wu
- School of Computer Science and Engineering, Central South University, Changsha 410083, China;
- Research Center for Artificial Intelligence, Monash University, Clayton, VIC 3800, Australia
- Correspondence: (H.L.); (J.W.)
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Recent Progress in Smart Electronic Nose Technologies Enabled with Machine Learning Methods. SENSORS 2021; 21:s21227620. [PMID: 34833693 PMCID: PMC8619411 DOI: 10.3390/s21227620] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/24/2021] [Revised: 11/08/2021] [Accepted: 11/13/2021] [Indexed: 02/07/2023]
Abstract
Machine learning methods enable the electronic nose (E-Nose) for precise odor identification with both qualitative and quantitative analysis. Advanced machine learning methods are crucial for the E-Nose to gain high performance and strengthen its capability in many applications, including robotics, food engineering, environment monitoring, and medical diagnosis. Recently, many machine learning techniques have been studied, developed, and integrated into feature extraction, modeling, and gas sensor drift compensation. The purpose of feature extraction is to keep robust pattern information in raw signals while removing redundancy and noise. With the extracted feature, a proper modeling method can effectively use the information for prediction. In addition, drift compensation is adopted to relieve the model accuracy degradation due to the gas sensor drifting. These recent advances have significantly promoted the prediction accuracy and stability of the E-Nose. This review is engaged to provide a summary of recent progress in advanced machine learning methods in E-Nose technologies and give an insight into new research directions in feature extraction, modeling, and sensor drift compensation.
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Liu L, Li W, He Z, Chen W, Liu H, Chen K, Pi X. Detection of lung cancer with electronic nose using a novel ensemble learning framework. J Breath Res 2021; 15. [PMID: 33578407 DOI: 10.1088/1752-7163/abe5c9] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Accepted: 02/12/2021] [Indexed: 02/02/2023]
Abstract
Breath analysis based on electronic nose (e-nose) is a promising new technology for the detection of lung cancer that is non-invasive, simple to operate and cost-effective. Lung cancer screening by e-nose relies on predictive models established using machine learning methods. However, using only a single machine learning method to detect lung cancer has some disadvantages, including low detection accuracy and high false negative rate. To address these problems, groups of individual learning models with excellent performance were selected from classic models, including Support Vector Machine, Decision Tree, Random Forest, Logistic Regression and K-nearest neighbor regression, to build an ensemble learning framework (PCA-SVE). The output result of the PCA-SVE framework was obtained by voting. To test this approach, we analyzed 214 breath samples measured by e-nose with 11 gas sensors of four types using the proposed PCA-SVE framework. Experimental results indicated that the accuracy, sensitivity, and specificity of the proposed framework were 95.75%, 94.78%, and 96.96%, respectively. This framework overcomes the disadvantages of a single model, thereby providing an improved, practical alternative for exhaled breath analysis by e-nose.
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Affiliation(s)
- Lei Liu
- Key Laboratory of Biotechnology Science and Technology, Ministry of Education, College of Bioengineering, Chongqing University, Chongqing, P.R. China, Chongqing, Chongqing, 400044, CHINA
| | - Wang Li
- School of Pharmacy and Bioengineering, Chongqing University of Technology, No.174 Shazhengjie, Shapingba, Chongqing, Chongqing, 400044, CHINA
| | - ZiChun He
- Chongqing Red Cross Hospital (People's Hospital of Jiangbei District), Chongqing Red Cross Hospital, 168 Hai'er Rd, Chongqing, 400020 , CHINA
| | - Weimin Chen
- Kunming University, No.727 South Jingming Rd, Chenggong District, Kunming, Yunnan, 650500, CHINA
| | - Hongying Liu
- Key Laboratory of Biotechnology Science and Technology, Ministry of Education, College of Bioengineering, Chongqing University, No.174 Shazhengjie, Shapingba, Chongqing, Chongqing, 400044, CHINA
| | - Ke Chen
- Key Laboratory of Biotechnology Science and Technology, Ministry of Education, College of Bioengineering, , Chongqing University, No.174 Shazhengjie, Shapingba, Chongqing, Chongqing, 400044, CHINA
| | - Xitian Pi
- Key Laboratory of Biotechnology Science and Technology, Ministry of Education, College of Bioengineering, , Chongqing University, No.174 Shazhengjie, Shapingba, Chongqing, Chongqing, 400044, CHINA
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Mo Z, Luo D, Wen T, Cheng Y, Li X. FPGA Implementation for Odor Identification with Depthwise Separable Convolutional Neural Network. SENSORS 2021; 21:s21030832. [PMID: 33513692 PMCID: PMC7865880 DOI: 10.3390/s21030832] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Revised: 01/22/2021] [Accepted: 01/24/2021] [Indexed: 12/12/2022]
Abstract
The integrated electronic nose (e-nose) design, which integrates sensor arrays and recognition algorithms, has been widely used in different fields. However, the current integrated e-nose system usually suffers from the problem of low accuracy with simple algorithm structure and slow speed with complex algorithm structure. In this article, we propose a method for implementing a deep neural network for odor identification in a small-scale Field-Programmable Gate Array (FPGA). First, a lightweight odor identification with depthwise separable convolutional neural network (OI-DSCNN) is proposed to reduce parameters and accelerate hardware implementation performance. Next, the OI-DSCNN is implemented in a Zynq-7020 SoC chip based on the quantization method, namely, the saturation-flooring KL divergence scheme (SF-KL). The OI-DSCNN was conducted on the Chinese herbal medicine dataset, and simulation experiments and hardware implementation validate its effectiveness. These findings shed light on quick and accurate odor identification in the FPGA.
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Fu L, Lu B, Nie B, Peng Z, Liu H, Pi X. Hybrid Network with Attention Mechanism for Detection and Location of Myocardial Infarction Based on 12-Lead Electrocardiogram Signals. SENSORS 2020; 20:s20041020. [PMID: 32074979 PMCID: PMC7071130 DOI: 10.3390/s20041020] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/07/2020] [Revised: 01/28/2020] [Accepted: 02/11/2020] [Indexed: 12/13/2022]
Abstract
The electrocardiogram (ECG) is a non-invasive, inexpensive, and effective tool for myocardial infarction (MI) diagnosis. Conventional detection algorithms require solid domain expertise and rely heavily on handcrafted features. Although previous works have studied deep learning methods for extracting features, these methods still neglect the relationships between different leads and the temporal characteristics of ECG signals. To handle the issues, a novel multi-lead attention (MLA) mechanism integrated with convolutional neural network (CNN) and bidirectional gated recurrent unit (BiGRU) framework (MLA-CNN-BiGRU) is therefore proposed to detect and locate MI via 12-lead ECG records. Specifically, the MLA mechanism automatically measures and assigns the weights to different leads according to their contribution. The two-dimensional CNN module exploits the interrelated characteristics between leads and extracts discriminative spatial features. Moreover, the BiGRU module extracts essential temporal features inside each lead. The spatial and temporal features from these two modules are fused together as global features for classification. In experiments, MI location and detection were performed under both intra-patient scheme and inter-patient scheme to test the robustness of the proposed framework. Experimental results indicate that our intelligent framework achieved satisfactory performance and demonstrated vital clinical significance.
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Affiliation(s)
- Lidan Fu
- Chongqing University-University of Cincinnati Joint Co-op Institute, Chongqing University, Chongqing 400030, China; (L.F.); (B.L.)
| | - Binchun Lu
- Chongqing University-University of Cincinnati Joint Co-op Institute, Chongqing University, Chongqing 400030, China; (L.F.); (B.L.)
| | - Bo Nie
- Key Laboratory of Biotechnology Science and Technology, Ministry of Education, College of Bioengineering, Chongqing University, Chongqing 400030, China;
| | - Zhiyun Peng
- State Key Laboratory of Power Transmission Equipment & System Security and New Technology, Chongqing University, Chongqing 400030, China;
| | - Hongying Liu
- Key Laboratory of Biotechnology Science and Technology, Ministry of Education, College of Bioengineering, Chongqing University, Chongqing 400030, China;
- Correspondence: (H.L.); (X.P.)
| | - Xitian Pi
- Key Laboratory of Biotechnology Science and Technology, Ministry of Education, College of Bioengineering, Chongqing University, Chongqing 400030, China;
- Correspondence: (H.L.); (X.P.)
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