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Novikov A, Perevoschikov S, Usenov I, Sakharova T, Artyushenko V, Bogomolov A. Multimodal fiber probe for simultaneous mid-infrared and Raman spectroscopy. Sci Rep 2024; 14:7430. [PMID: 38548800 PMCID: PMC10978856 DOI: 10.1038/s41598-024-57539-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Accepted: 03/19/2024] [Indexed: 04/01/2024] Open
Abstract
A fiber probe has been developed that enables simultaneous acquisition of mid-infrared (MIR) and Raman spectra in the region of 3100-2600 cm-1. Multimodal measurement is based on a proposed ZrO2 crystal design at the tip of an attenuated total reflection (ATR) probe. Mid-infrared ATR spectra are obtained through a pair of chalcogenide infrared (CIR) fibers mounted at the base of the crystal. The probe enables both excitation and acquisition of a weak Raman signal from a portion of the sample in front of the crystal using an additional pair of silica fibers located in a plane perpendicular to the CIR fibers. The advantages of combining MIR and Raman spectra in a single probe have been discussed.
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Affiliation(s)
- Alexander Novikov
- Art Photonics GmbH, Rudower Chaussee 46, 12489, Berlin, Germany.
- Technische Universität Berlin, Straße Des 17. Juni 135, 10623, Berlin, Germany.
| | - Stanislav Perevoschikov
- Art Photonics GmbH, Rudower Chaussee 46, 12489, Berlin, Germany
- Skolkovo Institute of Science and Technology, Bolshoy Boulevard 30, Bld. 1, 121205, Moscow, Russia
| | - Iskander Usenov
- Art Photonics GmbH, Rudower Chaussee 46, 12489, Berlin, Germany
- Technische Universität Berlin, Straße Des 17. Juni 135, 10623, Berlin, Germany
| | | | | | - Andrey Bogomolov
- Art Photonics GmbH, Rudower Chaussee 46, 12489, Berlin, Germany
- Samara State Technical University, Molodogvardeyskaya Str. 244, 443100, Samara, Russia
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Shaikh R, Tafintseva V, Nippolainen E, Virtanen V, Solheim J, Zimmermann B, Saarakkala S, Töyräs J, Kohler A, Afara IO. Characterisation of Cartilage Damage via Fusing Mid-Infrared, Near-Infrared, and Raman Spectroscopic Data. J Pers Med 2023; 13:1036. [PMID: 37511649 PMCID: PMC10381453 DOI: 10.3390/jpm13071036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Revised: 06/19/2023] [Accepted: 06/22/2023] [Indexed: 07/30/2023] Open
Abstract
Mid-infrared spectroscopy (MIR), near-infrared spectroscopy (NIR), and Raman spectroscopy are all well-established analytical techniques in biomedical applications. Since they provide complementary chemical information, we aimed to determine whether combining them amplifies their strengths and mitigates their weaknesses. This study investigates the feasibility of the fusion of MIR, NIR, and Raman spectroscopic data for characterising articular cartilage integrity. Osteochondral specimens from bovine patellae were subjected to mechanical and enzymatic damage, and then MIR, NIR, and Raman data were acquired from the damaged and control specimens. We assessed the capacity of individual spectroscopic methods to classify the samples into damage or control groups using Partial Least Squares Discriminant Analysis (PLS-DA). Multi-block PLS-DA was carried out to assess the potential of data fusion by combining the dataset by applying two-block (MIR and NIR, MIR and Raman, NIR and Raman) and three-block approaches (MIR, NIR, and Raman). The results of the one-block models show a higher classification accuracy for NIR (93%) and MIR (92%) than for Raman (76%) spectroscopy. In contrast, we observed the highest classification efficiency of 94% and 93% for the two-block (MIR and NIR) and three-block models, respectively. The detailed correlative analysis of the spectral features contributing to the discrimination in the three-block models adds considerably more insight into the molecular origin of cartilage damage.
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Affiliation(s)
- Rubina Shaikh
- Department of Technical Physics, University of Eastern Finland, 70211 Kuopio, Finland
- School of Physics, Clinical and Optometric Sciences, Technological University Dublin, D07 XT95 Dublin, Ireland
| | - Valeria Tafintseva
- Faculty of Science and Technology, Norwegian University of Life Sciences, 1432 Ås, Norway
| | - Ervin Nippolainen
- Department of Technical Physics, University of Eastern Finland, 70211 Kuopio, Finland
| | - Vesa Virtanen
- Research Unit of Medical Imaging, Physics and Technology, University of Oulu, 90570 Oulu, Finland
| | - Johanne Solheim
- Faculty of Science and Technology, Norwegian University of Life Sciences, 1432 Ås, Norway
| | - Boris Zimmermann
- Faculty of Science and Technology, Norwegian University of Life Sciences, 1432 Ås, Norway
| | - Simo Saarakkala
- Research Unit of Medical Imaging, Physics and Technology, University of Oulu, 90570 Oulu, Finland
- Research Unit of Health Sciences and Technology, University of Oulu, 90220 Oulu, Finland
| | - Juha Töyräs
- Department of Technical Physics, University of Eastern Finland, 70211 Kuopio, Finland
- Science Service Center, Kuopio University Hospital, 70210 Kuopio, Finland
- School of Information Technology and Electrical Engineering, The University of Queensland, Brisban, QLD 4072, Australia
| | - Achim Kohler
- Faculty of Science and Technology, Norwegian University of Life Sciences, 1432 Ås, Norway
| | - Isaac O Afara
- Department of Technical Physics, University of Eastern Finland, 70211 Kuopio, Finland
- School of Information Technology and Electrical Engineering, The University of Queensland, Brisban, QLD 4072, Australia
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Veettil TCP, Wood BR. A Combined Near-Infrared and Mid-Infrared Spectroscopic Approach for the Detection and Quantification of Glycine in Human Serum. SENSORS (BASEL, SWITZERLAND) 2022; 22:s22124528. [PMID: 35746311 PMCID: PMC9228712 DOI: 10.3390/s22124528] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Revised: 06/03/2022] [Accepted: 06/10/2022] [Indexed: 05/16/2023]
Abstract
Serum is an important candidate in proteomics analysis as it potentially carries key markers on health status and disease progression. However, several important diagnostic markers found in the circulatory proteome and the low-molecular-weight (LMW) peptidome have become analytically challenging due to the high dynamic concentration range of the constituent protein/peptide species in serum. Herein, we propose a novel approach to improve the limit of detection (LoD) of LMW amino acids by combining mid-IR (MIR) and near-IR spectroscopic data using glycine as a model LMW analyte. This is the first example of near-IR spectroscopy applied to elucidate the detection limit of LMW components in serum; moreover, it is the first study of its kind to combine mid-infrared (25-2.5 μm) and near-infrared (2500-800 nm) to detect an analyte in serum. First, we evaluated the prediction model performance individually with MIR (ATR-FTIR) and NIR spectroscopic methods using partial least squares regression (PLS-R) analysis. The LoD was found to be 0.26 mg/mL with ATR spectroscopy and 0.22 mg/mL with NIR spectroscopy. Secondly, we examined the ability of combined spectral regions to enhance the detection limit of serum-based LMW amino acids. Supervised extended wavelength PLS-R resulted in a root mean square error of prediction (RMSEP) value of 0.303 mg/mL and R2 value of 0.999 over a concentration range of 0-50 mg/mL for glycine spiked in whole serum. The LoD improved to 0.17 mg/mL from 0.26 mg/mL. Thus, the combination of NIR and mid-IR spectroscopy can improve the limit of detection for an LMW compound in a complex serum matrix.
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Affiliation(s)
- Thulya Chakkumpulakkal Puthan Veettil
- Centre for Biospectroscopy, Monash University, Clayton, VIC 3800, Australia;
- Centre for Sustainable and Circular Technologies (CSCT), University of Bath, Bath BA2 7AY, UK
| | - Bayden R. Wood
- Centre for Biospectroscopy, Monash University, Clayton, VIC 3800, Australia;
- Correspondence:
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