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Arora J, Altuwaijri G, Nauman A, Tushir M, Sharma T, Gupta D, Kim SW. Conditional spatial biased intuitionistic clustering technique for brain MRI image segmentation. Front Comput Neurosci 2024; 18:1425008. [PMID: 39006238 PMCID: PMC11240844 DOI: 10.3389/fncom.2024.1425008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Accepted: 06/03/2024] [Indexed: 07/16/2024] Open
Abstract
In clinical research, it is crucial to segment the magnetic resonance (MR) brain image for studying the internal tissues of the brain. To address this challenge in a sustainable manner, a novel approach has been proposed leveraging the power of unsupervised clustering while integrating conditional spatial properties of the image into intuitionistic clustering technique for segmenting MRI images of brain scans. In the proposed technique, an Intuitionistic-based clustering approach incorporates a nuanced understanding of uncertainty inherent in the image data. The measure of uncertainty is achieved through calculation of hesitation degree. The approach introduces a conditional spatial function alongside the intuitionistic membership matrix, enabling the consideration of spatial relationships within the image. Furthermore, by calculating weighted intuitionistic membership matrix, the algorithm gains the ability to adapt its smoothing behavior based on the local context. The main advantages are enhanced robustness with homogenous segments, lower sensitivity to noise, intensity inhomogeneity and accommodation of degree of hesitation or uncertainty that may exist in the real-world datasets. A comparative analysis of synthetic and real datasets of MR brain images proves the efficiency of the suggested approach over different algorithms. The paper investigates how the suggested research methodology performs in medical industry under different circumstances including both qualitative and quantitative parameters such as segmentation accuracy, similarity index, true positive ratio, false positive ratio. The experimental outcomes demonstrate that the suggested algorithm outperforms in retaining image details and achieving segmentation accuracy.
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Affiliation(s)
| | - Ghadir Altuwaijri
- Department of Computer Engineering, College of Computer and Information Sciences, Majmaah University, Majmaah, Saudi Arabia
| | - Ali Nauman
- School of Computer Science and Engineering, Yeungnam University, Gyeongsan, Republic of Korea
| | | | | | - Deepali Gupta
- Chitkara University Institute of Engineering and Technology, Chitkara University, Punjab, India
| | - Sung Won Kim
- School of Computer Science and Engineering, Yeungnam University, Gyeongsan, Republic of Korea
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Saladi S, Karuna Y, Koppu S, Reddy GR, Mohan S, Mallik S, Qin H. Segmentation and Analysis Emphasizing Neonatal MRI Brain Images Using Machine Learning Techniques. MATHEMATICS 2023; 11:285. [DOI: 10.3390/math11020285] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/15/2023]
Abstract
MRI scanning has shown significant growth in the detection of brain tumors in the recent decade among various methods such as MRA, X-ray, CT, PET, SPECT, etc. Brain tumor identification requires high exactness because a minor error can be life-threatening. Brain tumor disclosure remains a challenging job in medical image processing. This paper targets to explicate a method that is more precise and accurate in brain tumor detection and focuses on tumors in neonatal brains. The infant brain varies from the adult brain in some aspects, and proper preprocessing technique proves to be fruitful to avoid miscues in results. This paper is divided into two parts: In the first half, preprocessing was accomplished using HE, CLAHE, and BPDFHE enhancement techniques. An analysis is the sequel to the above methods to check for the best method based on performance metrics, i.e., MSE, PSNR, RMSE, and AMBE. The second half deals with the segmentation process. We propose a novel ARKFCM to use for segmentation. Finally, the trends in the performance metrics (dice similarity and Jaccard similarity) as well as the segmentation results are discussed in comparison with the conventional FCM method.
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Wang X, Hao Y, Sun H, Chen C. MRI Imaging Omics and Risk Factors Analysis of PWMD in Premature Infants Based on Fuzzy Clustering Algorithm. CONTRAST MEDIA & MOLECULAR IMAGING 2022; 2022:8624617. [PMID: 36247847 PMCID: PMC9536967 DOI: 10.1155/2022/8624617] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/02/2022] [Revised: 08/09/2022] [Accepted: 08/18/2022] [Indexed: 01/26/2023]
Abstract
The magnetic resonance imaging (MRI) characteristics of periventricular white matter damage (PWMD) in premature infants using the fuzzy c-means clustering algorithm (FCM) is explored, and the influencing factors are further clarified. A total of 100 premature infants admitted to the neonatal department of our hospital from February 2020 to February 2022 are selected for in-depth investigation. According to the occurrence of PWMD, they are divided into the PWMD group and the simple premature delivery group, with 50 cases in each group. All preterm infants are examined by MRI and the changes in image characteristics and apparent diffusion coefficient (ADC) values are analyzed. Clinical information of the subjects is collected and the influencing factors of PWMD in preterm infants are analyzed by multivariate regression analysis. In the first magnetic resonance imaging (MRI) examination, the cases of punctured, clustered, and linear lesions are 28 cases, 12 cases, and 10 cases, respectively. The experimental results showed that PWMD of preterm infants presented punctate, clustered, and high linear T1 signal MRI manifestations, which caused a downward trend of ADC value, and caused respiratory distress, low birth weight, premature rupture of membranes, respiratory tract infection, and other risk symptoms.
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Affiliation(s)
- Xiaofei Wang
- Department of Radiology, Xi'an Children's Hospital, Xi'an 710003, China
| | - Yuewen Hao
- Department of Radiology, Xi'an Children's Hospital, Xi'an 710003, China
| | - Huan Sun
- NICU, Xi'an Children's Hospital, Xi'an 710003, China
| | - Chao Chen
- Department of Radiology, Xi'an Children's Hospital, Xi'an 710003, China
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Xu J, Hou Q, Qu K, Sun Y, Meng X. A Fast Weighted Fuzzy C-Medoids Clustering for Time Series Data Based on P-Splines. SENSORS (BASEL, SWITZERLAND) 2022; 22:6163. [PMID: 36015930 PMCID: PMC9414275 DOI: 10.3390/s22166163] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/26/2022] [Revised: 08/10/2022] [Accepted: 08/15/2022] [Indexed: 06/15/2023]
Abstract
The rapid growth of digital information has produced massive amounts of time series data on rich features and most time series data are noisy and contain some outlier samples, which leads to a decline in the clustering effect. To efficiently discover the hidden statistical information about the data, a fast weighted fuzzy C-medoids clustering algorithm based on P-splines (PS-WFCMdd) is proposed for time series datasets in this study. Specifically, the P-spline method is used to fit the functional data related to the original time series data, and the obtained smooth-fitting data is used as the input of the clustering algorithm to enhance the ability to process the data set during the clustering process. Then, we define a new weighted method to further avoid the influence of outlier sample points in the weighted fuzzy C-medoids clustering process, to improve the robustness of our algorithm. We propose using the third version of mueen's algorithm for similarity search (MASS 3) to measure the similarity between time series quickly and accurately, to further improve the clustering efficiency. Our new algorithm is compared with several other time series clustering algorithms, and the performance of the algorithm is evaluated experimentally on different types of time series examples. The experimental results show that our new method can speed up data processing and the comprehensive performance of each clustering evaluation index are relatively good.
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Affiliation(s)
- Jiucheng Xu
- College of Computer and Information Engineering, Henan Normal University, Xinxiang 453007, China
- Engineering Lab of Intelligence Business & Internet of Things, Xinxiang 453007, China
| | - Qinchen Hou
- College of Computer and Information Engineering, Henan Normal University, Xinxiang 453007, China
- Engineering Lab of Intelligence Business & Internet of Things, Xinxiang 453007, China
| | - Kanglin Qu
- College of Computer and Information Engineering, Henan Normal University, Xinxiang 453007, China
- Engineering Lab of Intelligence Business & Internet of Things, Xinxiang 453007, China
| | - Yuanhao Sun
- College of Computer and Information Engineering, Henan Normal University, Xinxiang 453007, China
- Engineering Lab of Intelligence Business & Internet of Things, Xinxiang 453007, China
| | - Xiangru Meng
- College of Computer and Information Engineering, Henan Normal University, Xinxiang 453007, China
- Engineering Lab of Intelligence Business & Internet of Things, Xinxiang 453007, China
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Value of Magnetic Resonance Images and Magnetic Resonance Spectroscopy in Diagnosis of Brain Tumors under Fuzzy C-Means Algorithm. CONTRAST MEDIA & MOLECULAR IMAGING 2022; 2022:3315121. [PMID: 35685667 PMCID: PMC9170444 DOI: 10.1155/2022/3315121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2022] [Revised: 05/03/2022] [Accepted: 05/05/2022] [Indexed: 11/18/2022]
Abstract
This study was aimed to explore the diagnostic value of magnetic resonance imaging (MRI) and magnetic resonance spectroscopy (MRS) in brain tumors under the fuzzy C-means (FCM) algorithm. The two-dimensional FCM hybrid algorithm was improved to be three-dimensional. The MRI images and MRS spectra of 127 patients with brain tumors (low-grade glioma group) and 54 healthy people (healthy group) were analyzed. The results suggested that the membership matrix of the improved algorithm had lower ambiguity, higher segmentation accuracy, closer relationship of intrapixels, and stronger irrelevance of interclass pixels. Through the analysis of gray matter volume, it was found that, compared with the healthy group, the gray matter and white matter volumes in the brain of high-grade glioma were higher, and those of low-grade glioma group were lower. The improved FCM algorithm could obtain a higher accuracy of 88.64% in segmenting images. It had a higher sensitivity to gray matter changes in brain tumors, reaching 92.72%; its specificity was not much different from that of traditional FCM, which were 83.61% and 88.06%, respectively. In the diagnostic value, the area under the curve of mean kurtosis was the largest, which was 0.962 (P < 0.001). The best critical value was 0.4096, which had a greater reference significance for clinical treatment and prognosis. The ratio of choline/N-acetyl-aspartate and the ratio of choline/creatine also showed significant differences in high- and low-grade gliomas (P < 0.05), but the specificity and sensitivity were slightly lower. It also had guiding significance for the grading of gliomas. Overall, the improved FCM algorithm had obvious advantages in the segmentation process of MRI images, which provided help for the clinical diagnosis of brain tumors.
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Chang HH, Yeh SJ, Chiang MC, Hsieh ST. Segmentation of Rat Brains and Cerebral Hemispheres in Triphenyltetrazolium Chloride-Stained Images after Stroke. SENSORS 2021; 21:s21217171. [PMID: 34770479 PMCID: PMC8588199 DOI: 10.3390/s21217171] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/08/2021] [Revised: 10/18/2021] [Accepted: 10/26/2021] [Indexed: 01/18/2023]
Abstract
Ischemic stroke is one of the leading causes of death among the aged population in the world. Experimental stroke models with rodents play a fundamental role in the investigation of the mechanism and impairment of cerebral ischemia. For its celerity and veracity, the 2,3,5-triphenyltetrazolium chloride (TTC) staining of rat brains has been extensively adopted to visualize the infarction, which is subsequently photographed for further processing. Two important tasks are to segment the brain regions and to compute the midline that separates the brain. This paper investigates automatic brain extraction and hemisphere segmentation algorithms in camera-based TTC-stained rat images. For rat brain extraction, a saliency region detection scheme on a superpixel image is exploited to extract the brain regions from the raw complicated image. Subsequently, the initial brain slices are refined using a parametric deformable model associated with color image transformation. For rat hemisphere segmentation, open curve evolution guided by the gradient vector flow in a medial subimage is developed to compute the midline. A wide variety of TTC-stained rat brain images captured by a smartphone were produced and utilized to evaluate the proposed segmentation frameworks. Experimental results on the segmentation of rat brains and cerebral hemispheres indicated that the developed schemes achieved high accuracy with average Dice scores of 92.33% and 97.15%, respectively. The established segmentation algorithms are believed to be potential and beneficial to facilitate experimental stroke study with TTC-stained rat brain images.
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Affiliation(s)
- Herng-Hua Chang
- Department of Engineering Science and Ocean Engineering, National Taiwan University, Taipei 10617, Taiwan;
| | - Shin-Joe Yeh
- Graduate Institute of Anatomy and Cell Biology, College of Medicine, National Taiwan University, Taipei 10051, Taiwan;
- Department of Neurology and Stroke Center, National Taiwan University Hospital, Taipei 10002, Taiwan
| | - Ming-Chang Chiang
- Department of Biomedical Engineering, National Yang Ming Chiao Tung University, Taipei 11221, Taiwan
- Correspondence: (M.-C.C.); (S.-T.H.)
| | - Sung-Tsang Hsieh
- Graduate Institute of Anatomy and Cell Biology, College of Medicine, National Taiwan University, Taipei 10051, Taiwan;
- Department of Neurology and Stroke Center, National Taiwan University Hospital, Taipei 10002, Taiwan
- Graduate Institute of Clinical Medicine, College of Medicine, National Taiwan University, Taipei 10051, Taiwan
- Graduate Institute of Brain and Mind Sciences, College of Medicine, National Taiwan University, Taipei 10051, Taiwan
- Center of Precision Medicine, College of Medicine, National Taiwan University, Taipei 10051, Taiwan
- Correspondence: (M.-C.C.); (S.-T.H.)
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