1
|
Fick R, Medina M, Angelini C, Kaplan D, Gader P, He W, Jiang Z, Zheng G. Fusing remote sensing data with spatiotemporal in situ samples for red tide (Karenia brevis) detection. INTEGRATED ENVIRONMENTAL ASSESSMENT AND MANAGEMENT 2024; 20:1432-1446. [PMID: 38426802 DOI: 10.1002/ieam.4908] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2023] [Revised: 02/01/2024] [Accepted: 02/01/2024] [Indexed: 03/02/2024]
Abstract
We present a novel method for detecting red tide (Karenia brevis) blooms off the west coast of Florida, driven by a neural network classifier that combines remote sensing data with spatiotemporally distributed in situ sample data. The network detects blooms over a 1-km grid, using seven ocean color features from the MODIS-Aqua satellite platform (2002-2021) and in situ sample data collected by the Florida Fish and Wildlife Conservation Commission and its partners. Model performance was demonstrably enhanced by two key innovations: depth normalization of satellite features and encoding of an in situ feature. The satellite features were normalized to adjust for depth-dependent bottom reflection effects in shallow coastal waters. The in situ data were used to engineer a feature that contextualizes recent nearby ground truth of K. brevis concentrations through a K-nearest neighbor spatiotemporal proximity weighting scheme. A rigorous experimental comparison revealed that our model outperforms existing remote detection methods presented in the literature and applied in practice. This classifier has strong potential to be operationalized to support more efficient monitoring and mitigation of future blooms, more accurate communication about their spatial extent and distribution, and a deeper scientific understanding of bloom dynamics, transport, drivers, and impacts in the region. This approach also has the potential to be adapted for the detection of other algal blooms in coastal waters. Integr Environ Assess Manag 2024;20:1432-1446. © 2024 SETAC.
Collapse
Affiliation(s)
- Ronald Fick
- Center for Coastal Solutions, University of Florida, Gainesville, Florida, USA
| | - Miles Medina
- Center for Coastal Solutions, University of Florida, Gainesville, Florida, USA
- ECCO Scientific, LLC, St. Petersburg, Florida, USA
| | - Christine Angelini
- Center for Coastal Solutions, University of Florida, Gainesville, Florida, USA
| | - David Kaplan
- Center for Coastal Solutions, University of Florida, Gainesville, Florida, USA
| | - Paul Gader
- Center for Coastal Solutions, University of Florida, Gainesville, Florida, USA
| | - Wenchong He
- Center for Coastal Solutions, University of Florida, Gainesville, Florida, USA
- Computer & Information Science & Engineering, University of Florida, Gainesville, Florida, USA
| | - Zhe Jiang
- Center for Coastal Solutions, University of Florida, Gainesville, Florida, USA
- Computer & Information Science & Engineering, University of Florida, Gainesville, Florida, USA
| | - Guangming Zheng
- NOAA/NESDIS Center for Satellite Applications and Research, College Park, Maryland, USA
- Cooperative Institute for Satellite Earth System Studies, Earth System Science Interdisciplinary Center, University of Maryland, College Park, Maryland, USA
| |
Collapse
|
2
|
Feng C, Wang S, Li Z. Long-term spatial variation of algal blooms extracted using the U-net model from 10 years of GOCI imagery in the East China Sea. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2022; 321:115966. [PMID: 36007383 DOI: 10.1016/j.jenvman.2022.115966] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2022] [Revised: 08/01/2022] [Accepted: 08/04/2022] [Indexed: 06/15/2023]
Abstract
Long-term satellite missions could help to provide insights into spatial and temporal variations in algal blooms. However, the traditional reflectance-based method has limitations in regards to determining the available threshold for algal bloom detection among the time-varying observation conditions. In terms of extracting useful information from long-term data series precisely and efficiently, the deep learning method has shown its superiority over traditional algorithms in batch data processing. In this study, a U-net model for algal bloom extraction along the coast of the East China Sea was developed using GOCI images. The U-net model was trained with two different datasets that were constructed with six-band channels (all visible bands from GOCI imagery) and RGB-band channels (bands of 443, 555, and 680 nm from GOCI imagery). The quantitative assessment from the U-net models suggests that the U-net model trained with the six-band channel datasets outperformed the RGB-band channel datasets, with increases of 23.6%, 18.1%, and 12.5% in terms of accuracy, precision, and F-score, respectively. The validation map derived from the U-net model trained with six-band channel datasets also showed considerable matching with the ground-truth maps. By using the U-net model, the occurrence of algal blooms was automatically extracted from GOCI images. A 10-year time series of GOCI data collected between 2011 and 2020 was derived using an output-trained U-net model to explore spatial variation along the coast of the ECS. It was found that the most affected areas of the algal blooms varied by year, but were mainly located in the Zhoushan and Zhejiang coasts. Additionally, by performing principal component analysis on the daily meteorological data during April and August 2011-2020, factors related to algal bloom occurrence were discussed.
Collapse
Affiliation(s)
- Chi Feng
- School of Geography Science and Geomatics Engineering, Suzhou University of Science and Technology, 99 Xuefu Road, Suzhou, 215009, China.
| | - Shengqiang Wang
- School of Marine Sciences, Nanjing University of Information Science & Technology, 219 Ningliu Road, Nanjing, 210044, China
| | - Zimeng Li
- Graduate School of Environmental Studies, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, 464-8601, Japan
| |
Collapse
|