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Rai HM, Yoo J, Agarwal S, Agarwal N. LightweightUNet: Multimodal Deep Learning with GAN-Augmented Imaging Data for Efficient Breast Cancer Detection. Bioengineering (Basel) 2025; 12:73. [PMID: 39851348 PMCID: PMC11761908 DOI: 10.3390/bioengineering12010073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2024] [Revised: 01/06/2025] [Accepted: 01/08/2025] [Indexed: 01/26/2025] Open
Abstract
Breast cancer ranks as the second most prevalent cancer globally and is the most frequently diagnosed cancer among women; therefore, early, automated, and precise detection is essential. Most AI-based techniques for breast cancer detection are complex and have high computational costs. Hence, to overcome this challenge, we have presented the innovative LightweightUNet hybrid deep learning (DL) classifier for the accurate classification of breast cancer. The proposed model boasts a low computational cost due to its smaller number of layers in its architecture, and its adaptive nature stems from its use of depth-wise separable convolution. We have employed a multimodal approach to validate the model's performance, using 13,000 images from two distinct modalities: mammogram imaging (MGI) and ultrasound imaging (USI). We collected the multimodal imaging datasets from seven different sources, including the benchmark datasets DDSM, MIAS, INbreast, BrEaST, BUSI, Thammasat, and HMSS. Since the datasets are from various sources, we have resized them to the uniform size of 256 × 256 pixels and normalized them using the Box-Cox transformation technique. Since the USI dataset is smaller, we have applied the StyleGAN3 model to generate 10,000 synthetic ultrasound images. In this work, we have performed two separate experiments: the first on a real dataset without augmentation and the second on a real + GAN-augmented dataset using our proposed method. During the experiments, we used a 5-fold cross-validation method, and our proposed model obtained good results on the real dataset (87.16% precision, 86.87% recall, 86.84% F1-score, and 86.87% accuracy) without adding any extra data. Similarly, the second experiment provides better performance on the real + GAN-augmented dataset (96.36% precision, 96.35% recall, 96.35% F1-score, and 96.35% accuracy). This multimodal approach, which utilizes LightweightUNet, enhances the performance by 9.20% in precision, 9.48% in recall, 9.51% in F1-score, and a 9.48% increase in accuracy on the combined dataset. The LightweightUNet model we proposed works very well thanks to a creative network design, adding fake images to the data, and a multimodal training method. These results show that the model has a lot of potential for use in clinical settings.
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Affiliation(s)
- Hari Mohan Rai
- School of Computing, Gachon University, Seongnam 13120, Republic of Korea;
| | - Joon Yoo
- School of Computing, Gachon University, Seongnam 13120, Republic of Korea;
| | - Saurabh Agarwal
- Department of Information and Communication Engineering, Yeungnam University, Gyeongsan 38541, Republic of Korea
| | - Neha Agarwal
- School of Chemical Engineering, Yeungnam University, Gyeongsan 38541, Republic of Korea
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Xiang Q, Li D, Hu Z, Yuan Y, Sun Y, Zhu Y, Fu Y, Jiang Y, Hua X. Quantum classical hybrid convolutional neural networks for breast cancer diagnosis. Sci Rep 2024; 14:24699. [PMID: 39433779 PMCID: PMC11494181 DOI: 10.1038/s41598-024-74778-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Accepted: 09/30/2024] [Indexed: 10/23/2024] Open
Abstract
The World Health Organization states that early diagnosis is essential to increasing the cure rate for breast cancer, which poses a danger to women's health worldwide. However, the efficacy and cost limitations of conventional diagnostic techniques increase the possibility of misdiagnosis. In this work, we present a quantum hybrid classical convolutional neural network (QCCNN) based breast cancer diagnosis approach with the goal of utilizing quantum computing's high-dimensional data processing power and parallelism to increase diagnosis efficiency and accuracy. When working with large-scale and complicated datasets, classical convolutional neural network (CNN) and other machine learning techniques generally demand a large amount of computational resources and time. Their restricted capacity for generalization makes it challenging to maintain consistent performance across multiple data sets. To address these issues, this paper adds a quantum convolutional layer to the classical convolutional neural network to take advantage of quantum computing to improve learning efficiency and processing speed. Simulation experiments on three breast cancer datasets, GBSG, SEER and WDBC, validate the robustness and generalization of QCCNN and significantly outperform CNN and logistic regression models in classification accuracy. This study not only provides a novel method for breast cancer diagnosis but also achieves a breakthrough in breast cancer diagnosis and promotes the development of medical diagnostic technology.
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Affiliation(s)
- Qiuyu Xiang
- College of Computer Science And Cyber Security(Pilot Software College), Chengdu University of Technology, Chengdu, 610059, China
| | - Dongfen Li
- College of Computer Science And Cyber Security(Pilot Software College), Chengdu University of Technology, Chengdu, 610059, China.
| | - Zhikang Hu
- College of Computer Science And Cyber Security(Pilot Software College), Chengdu University of Technology, Chengdu, 610059, China
| | - Yuhang Yuan
- College of Computer Science And Cyber Security(Pilot Software College), Chengdu University of Technology, Chengdu, 610059, China
| | - Yuchen Sun
- College of Computer Science And Cyber Security(Pilot Software College), Chengdu University of Technology, Chengdu, 610059, China
| | - Yonghao Zhu
- College of Computer Science And Cyber Security(Pilot Software College), Chengdu University of Technology, Chengdu, 610059, China
| | - You Fu
- College of Computer Science And Cyber Security(Pilot Software College), Chengdu University of Technology, Chengdu, 610059, China
| | - Yangyang Jiang
- College of Computer Science And Cyber Security(Pilot Software College), Chengdu University of Technology, Chengdu, 610059, China
| | - Xiaoyu Hua
- College of Computer Science And Cyber Security(Pilot Software College), Chengdu University of Technology, Chengdu, 610059, China
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Rai HM, Dashkevych S, Yoo J. Next-Generation Diagnostics: The Impact of Synthetic Data Generation on the Detection of Breast Cancer from Ultrasound Imaging. MATHEMATICS 2024; 12:2808. [DOI: 10.3390/math12182808] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/11/2025]
Abstract
Breast cancer is one of the most lethal and widespread diseases affecting women worldwide. As a result, it is necessary to diagnose breast cancer accurately and efficiently utilizing the most cost-effective and widely used methods. In this research, we demonstrated that synthetically created high-quality ultrasound data outperformed conventional augmentation strategies for efficiently diagnosing breast cancer using deep learning. We trained a deep-learning model using the EfficientNet-B7 architecture and a large dataset of 3186 ultrasound images acquired from multiple publicly available sources, as well as 10,000 synthetically generated images using generative adversarial networks (StyleGAN3). The model was trained using five-fold cross-validation techniques and validated using four metrics: accuracy, recall, precision, and the F1 score measure. The results showed that integrating synthetically produced data into the training set increased the classification accuracy from 88.72% to 92.01% based on the F1 score, demonstrating the power of generative models to expand and improve the quality of training datasets in medical-imaging applications. This demonstrated that training the model using a larger set of data comprising synthetic images significantly improved its performance by more than 3% over the genuine dataset with common augmentation. Various data augmentation procedures were also investigated to improve the training set’s diversity and representativeness. This research emphasizes the relevance of using modern artificial intelligence and machine-learning technologies in medical imaging by providing an effective strategy for categorizing ultrasound images, which may lead to increased diagnostic accuracy and optimal treatment options. The proposed techniques are highly promising and have strong potential for future clinical application in the diagnosis of breast cancer.
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Affiliation(s)
- Hari Mohan Rai
- School of Computing, Gachon University, 1342 Seongnam-daero, Sujeong-gu, Seongnam-si 13120, Gyeonggi-do, Republic of Korea
| | - Serhii Dashkevych
- Department of Computer Engineering, Vistula University, Stokłosy 3, 02-787 Warszawa, Poland
| | - Joon Yoo
- School of Computing, Gachon University, 1342 Seongnam-daero, Sujeong-gu, Seongnam-si 13120, Gyeonggi-do, Republic of Korea
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Hernández-Vázquez MA, Hernández-Rodríguez YM, Cortes-Rojas FD, Bayareh-Mancilla R, Cigarroa-Mayorga OE. Hybrid Feature Mammogram Analysis: Detecting and Localizing Microcalcifications Combining Gabor, Prewitt, GLCM Features, and Top Hat Filtering Enhanced with CNN Architecture. Diagnostics (Basel) 2024; 14:1691. [PMID: 39125567 PMCID: PMC11311263 DOI: 10.3390/diagnostics14151691] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2024] [Revised: 07/31/2024] [Accepted: 08/01/2024] [Indexed: 08/12/2024] Open
Abstract
Breast cancer is a prevalent malignancy characterized by the uncontrolled growth of glandular epithelial cells, which can metastasize through the blood and lymphatic systems. Microcalcifications, small calcium deposits within breast tissue, are critical markers for early detection of breast cancer, especially in non-palpable carcinomas. These microcalcifications, appearing as small white spots on mammograms, are challenging to identify due to potential confusion with other tissues. This study hypothesizes that a hybrid feature extraction approach combined with Convolutional Neural Networks (CNNs) can significantly enhance the detection and localization of microcalcifications in mammograms. The proposed algorithm employs Gabor, Prewitt, and Gray Level Co-occurrence Matrix (GLCM) kernels for feature extraction. These features are input to a CNN architecture designed with maxpooling layers, Rectified Linear Unit (ReLU) activation functions, and a sigmoid response for binary classification. Additionally, the Top Hat filter is used for precise localization of microcalcifications. The preprocessing stage includes enhancing contrast using the Volume of Interest Look-Up Table (VOI LUT) technique and segmenting regions of interest. The CNN architecture comprises three convolutional layers, three ReLU layers, and three maxpooling layers. The training was conducted using a balanced dataset of digital mammograms, with the Adam optimizer and binary cross-entropy loss function. Our method achieved an accuracy of 89.56%, a sensitivity of 82.14%, and a specificity of 91.47%, outperforming related works, which typically report accuracies around 85-87% and sensitivities between 76 and 81%. These results underscore the potential of combining traditional feature extraction techniques with deep learning models to improve the detection and localization of microcalcifications. This system may serve as an auxiliary tool for radiologists, enhancing early detection capabilities and potentially reducing diagnostic errors in mass screening programs.
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Affiliation(s)
- Miguel Alejandro Hernández-Vázquez
- Departamento de Tecnologías Avanzadas, UPIITA-Instituto Politécnico Nacional, Av. Instituto Politécnico Nacional 2580, Ciudad de México 07340, Mexico (Y.M.H.-R.)
| | - Yazmín Mariela Hernández-Rodríguez
- Departamento de Tecnologías Avanzadas, UPIITA-Instituto Politécnico Nacional, Av. Instituto Politécnico Nacional 2580, Ciudad de México 07340, Mexico (Y.M.H.-R.)
| | - Fausto David Cortes-Rojas
- Departamento de Ingeniería Eléctrica/Sección de Bioelectrónica, Centro de Investigación y de Estudios Avanzados del IPN, Av. Instituto Politécnico Nacional 2508, Col. San Pedro Zacatenco, Gustavo A. Madero, Ciudad de México 07360, Mexico;
| | - Rafael Bayareh-Mancilla
- Departamento de Tecnologías Avanzadas, UPIITA-Instituto Politécnico Nacional, Av. Instituto Politécnico Nacional 2580, Ciudad de México 07340, Mexico (Y.M.H.-R.)
| | - Oscar Eduardo Cigarroa-Mayorga
- Departamento de Tecnologías Avanzadas, UPIITA-Instituto Politécnico Nacional, Av. Instituto Politécnico Nacional 2580, Ciudad de México 07340, Mexico (Y.M.H.-R.)
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Rehman A, Mahmood T, Alamri FS, Saba T, Naseem S. Advanced feature learning and classification of microscopic breast abnormalities using a robust deep transfer learning technique. Microsc Res Tech 2024; 87:1862-1888. [PMID: 38553901 DOI: 10.1002/jemt.24557] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 01/21/2024] [Accepted: 03/14/2024] [Indexed: 07/03/2024]
Abstract
Breast cancer is a major health threat, with early detection crucial for improving cure and survival rates. Current systems rely on imaging technology, but digital pathology and computerized analysis can enhance accuracy, reduce false predictions, and improve medical care for breast cancer patients. The study explores the challenges in identifying benign and malignant breast cancer lesions using microscopic image datasets. It introduces a low-dimensional multiple-channel feature-based method for breast cancer microscopic image recognition, overcoming limitations in feature utilization and computational complexity. The method uses RGB channels for image processing and extracts features using level co-occurrence matrix, wavelet, Gabor, and histogram of oriented gradient. This approach aims to improve diagnostic efficiency and accuracy in breast cancer treatment. The core of our method is the SqE-DDConvNet algorithm, which utilizes a 3 × 1 convolution kernel, SqE-DenseNet module, bilinear interpolation, and global average pooling to enhance recognition accuracy and training efficiency. Additionally, we incorporate transfer learning with pre-trained models, including mVVGNet16, EfficientNetV2B3, ResNet101V2, and CN2XNet, preserving spatial information and achieving higher accuracy under varying magnification conditions. The method achieves higher accuracy compared to baseline models, including texture and deep semantic features. This deep learning-based methodology contributes to more accurate image classification and unique image recognition in breast cancer microscopic images. RESEARCH HIGHLIGHTS: Introduces a low-dimensional multiple-channel feature-based method for breast cancer microscopic image recognition. Uses RGB channels for image processing and extracts features using level co-occurrence matrix, wavelet, Gabor, and histogram of oriented gradient. Employs the SqE-DDConvNet algorithm for enhanced recognition accuracy and training efficiency. Transfer learning with pre-trained models preserves spatial information and achieves higher accuracy under varying magnification conditions. Evaluates predictive efficacy of transfer learning paradigms within microscopic analysis. Utilizes CNN-based pre-trained algorithms to enhance network performance.
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Affiliation(s)
- Amjad Rehman
- Artificial Intelligence and Data Analytics (AIDA) Lab, CCIS Prince Sultan University, Riyadh, Kingdom of Saudi Arabia
| | - Tariq Mahmood
- Artificial Intelligence and Data Analytics (AIDA) Lab, CCIS Prince Sultan University, Riyadh, Kingdom of Saudi Arabia
- Faculty of Information Sciences, University of Education, Vehari Campus, Vehari, Pakistan
| | - Faten S Alamri
- Department of Mathematical Sciences, College of Science, Princess Nourah Bint Abdulrahman University, Riyadh, Saudi Arabia
| | - Tanzila Saba
- Artificial Intelligence and Data Analytics (AIDA) Lab, CCIS Prince Sultan University, Riyadh, Kingdom of Saudi Arabia
| | - Shahid Naseem
- Faculty of Information Sciences, Division of Science and Technology, University of Education, Lahore, Pakistan
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Bhalla D, Rangarajan K, Chandra T, Banerjee S, Arora C. Reproducibility and Explainability of Deep Learning in Mammography: A Systematic Review of Literature. Indian J Radiol Imaging 2024; 34:469-487. [PMID: 38912238 PMCID: PMC11188703 DOI: 10.1055/s-0043-1775737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/25/2024] Open
Abstract
Background Although abundant literature is currently available on the use of deep learning for breast cancer detection in mammography, the quality of such literature is widely variable. Purpose To evaluate published literature on breast cancer detection in mammography for reproducibility and to ascertain best practices for model design. Methods The PubMed and Scopus databases were searched to identify records that described the use of deep learning to detect lesions or classify images into cancer or noncancer. A modification of Quality Assessment of Diagnostic Accuracy Studies (mQUADAS-2) tool was developed for this review and was applied to the included studies. Results of reported studies (area under curve [AUC] of receiver operator curve [ROC] curve, sensitivity, specificity) were recorded. Results A total of 12,123 records were screened, of which 107 fit the inclusion criteria. Training and test datasets, key idea behind model architecture, and results were recorded for these studies. Based on mQUADAS-2 assessment, 103 studies had high risk of bias due to nonrepresentative patient selection. Four studies were of adequate quality, of which three trained their own model, and one used a commercial network. Ensemble models were used in two of these. Common strategies used for model training included patch classifiers, image classification networks (ResNet in 67%), and object detection networks (RetinaNet in 67%). The highest reported AUC was 0.927 ± 0.008 on a screening dataset, while it reached 0.945 (0.919-0.968) on an enriched subset. Higher values of AUC (0.955) and specificity (98.5%) were reached when combined radiologist and Artificial Intelligence readings were used than either of them alone. None of the studies provided explainability beyond localization accuracy. None of the studies have studied interaction between AI and radiologist in a real world setting. Conclusion While deep learning holds much promise in mammography interpretation, evaluation in a reproducible clinical setting and explainable networks are the need of the hour.
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Affiliation(s)
- Deeksha Bhalla
- Department of Radiodiagnosis, All India Institute of Medical Sciences, New Delhi, India
| | - Krithika Rangarajan
- Department of Radiodiagnosis, All India Institute of Medical Sciences, New Delhi, India
| | - Tany Chandra
- Department of Radiodiagnosis, All India Institute of Medical Sciences, New Delhi, India
| | - Subhashis Banerjee
- Department of Computer Science and Engineering, Indian Institute of Technology, New Delhi, India
| | - Chetan Arora
- Department of Computer Science and Engineering, Indian Institute of Technology, New Delhi, India
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Bilal A, Imran A, Liu X, Liu X, Ahmad Z, Shafiq M, El-Sherbeeny AM, Long H. BC-QNet: A quantum-infused ELM model for breast cancer diagnosis. Comput Biol Med 2024; 175:108483. [PMID: 38704900 DOI: 10.1016/j.compbiomed.2024.108483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2024] [Revised: 04/11/2024] [Accepted: 04/12/2024] [Indexed: 05/07/2024]
Abstract
The timely and accurate diagnosis of breast cancer is pivotal for effective treatment, but current automated mammography classification methods have their constraints. In this study, we introduce an innovative hybrid model that marries the power of the Extreme Learning Machine (ELM) with FuNet transfer learning, harnessing the potential of the MIAS dataset. This novel approach leverages an Enhanced Quantum-Genetic Binary Grey Wolf Optimizer (Q-GBGWO) within the ELM framework, elevating its performance. Our contributions are twofold: firstly, we employ a feature fusion strategy to optimize feature extraction, significantly enhancing breast cancer classification accuracy. The proposed methodological motivation stems from optimizing feature extraction for improved breast cancer classification accuracy. The Q-GBGWO optimizes ELM parameters, demonstrating its efficacy within the ELM classifier. This innovation marks a considerable advancement beyond traditional methods. Through comparative evaluations against various optimization techniques, the exceptional performance of our Q-GBGWO-ELM model becomes evident. The classification accuracy of the model is exceptionally high, with rates of 96.54 % for Normal, 97.24 % for Benign, and 98.01 % for Malignant classes. Additionally, the model demonstrates a high sensitivity with rates of 96.02 % for Normal, 96.54 % for Benign, and 97.75 % for Malignant classes, and it exhibits impressive specificity with rates of 96.69 % for Normal, 97.38 % for Benign, and 98.16 % for Malignant classes. These metrics are reflected in its ability to classify three different types of breast cancer accurately. Our approach highlights the innovative integration of image data, deep feature extraction, and optimized ELM classification, marking a transformative step in advancing early breast cancer detection and enhancing patient outcomes.
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Affiliation(s)
- Anas Bilal
- College of Information Science and Technology, Hainan Normal University, Haikou, 571158, China; Key Laboratory of Data Science and Smart Education, Ministry of Education, Hainan Normal University, Haikou, 571158, China
| | - Azhar Imran
- Department of Creative Technologies, Air University, Islamabad, 44000, Pakistan
| | - Xiaowen Liu
- College of Information Science and Technology, Hainan Normal University, Haikou, 571158, China; Key Laboratory of Data Science and Smart Education, Ministry of Education, Hainan Normal University, Haikou, 571158, China
| | - Xiling Liu
- College of Information Science and Technology, Hainan Normal University, Haikou, 571158, China; Key Laboratory of Data Science and Smart Education, Ministry of Education, Hainan Normal University, Haikou, 571158, China
| | - Zohaib Ahmad
- Department of Criminology & Forensic Sciences Technology, Lahore Garrison University, Lahore, Pakistan
| | - Muhammad Shafiq
- School of Information Engineering, Qujing Normal University, Yunnan, China
| | - Ahmed M El-Sherbeeny
- Industrial Engineering Department, College of Engineering, King Saud University, P.O. Box 800, Riyadh, 11421, Saudi Arabia
| | - Haixia Long
- College of Information Science and Technology, Hainan Normal University, Haikou, 571158, China; Key Laboratory of Data Science and Smart Education, Ministry of Education, Hainan Normal University, Haikou, 571158, China.
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Bilal A, Imran A, Baig TI, Liu X, Abouel Nasr E, Long H. Breast cancer diagnosis using support vector machine optimized by improved quantum inspired grey wolf optimization. Sci Rep 2024; 14:10714. [PMID: 38730250 PMCID: PMC11087531 DOI: 10.1038/s41598-024-61322-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2024] [Accepted: 05/03/2024] [Indexed: 05/12/2024] Open
Abstract
A prompt diagnosis of breast cancer in its earliest phases is necessary for effective treatment. While Computer-Aided Diagnosis systems play a crucial role in automated mammography image processing, interpretation, grading, and early detection of breast cancer, existing approaches face limitations in achieving optimal accuracy. This study addresses these limitations by hybridizing the improved quantum-inspired binary Grey Wolf Optimizer with the Support Vector Machines Radial Basis Function Kernel. This hybrid approach aims to enhance the accuracy of breast cancer classification by determining the optimal Support Vector Machine parameters. The motivation for this hybridization lies in the need for improved classification performance compared to existing optimizers such as Particle Swarm Optimization and Genetic Algorithm. Evaluate the efficacy of the proposed IQI-BGWO-SVM approach on the MIAS dataset, considering various metric parameters, including accuracy, sensitivity, and specificity. Furthermore, the application of IQI-BGWO-SVM for feature selection will be explored, and the results will be compared. Experimental findings demonstrate that the suggested IQI-BGWO-SVM technique outperforms state-of-the-art classification methods on the MIAS dataset, with a resulting mean accuracy, sensitivity, and specificity of 99.25%, 98.96%, and 100%, respectively, using a tenfold cross-validation datasets partition.
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Affiliation(s)
- Anas Bilal
- College of Information Science and Technology, Hainan Normal University, Haikou, 571158, China
- Key Laboratory of Data Science and Smart Education, Ministry of Education, Hainan Normal University, Haikou, 571158, China
| | - Azhar Imran
- Department of Creative Technologies, Air University, Islamabad, 44000, Pakistan
| | - Talha Imtiaz Baig
- School of Life Science and Technology, University of Electronic Science and Technology of China UESTC, Chengdu, Sichuan, China
| | - Xiaowen Liu
- College of Information Science and Technology, Hainan Normal University, Haikou, 571158, China
| | - Emad Abouel Nasr
- Industrial Engineering Department, College of Engineering, King Saud University, 11421, Riyadh, Saudi Arabia
| | - Haixia Long
- College of Information Science and Technology, Hainan Normal University, Haikou, 571158, China.
- Key Laboratory of Data Science and Smart Education, Ministry of Education, Hainan Normal University, Haikou, 571158, China.
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Chen Y, Jiang H, Li J, Zhang J, Wu P, Dai Z. A Mammography-Based Radiomic Nomogram for Predicting Malignancy in Breast Suspicious Microcalcifications. Acad Radiol 2024; 31:492-502. [PMID: 37940427 DOI: 10.1016/j.acra.2023.09.033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2023] [Revised: 09/21/2023] [Accepted: 09/22/2023] [Indexed: 11/10/2023]
Abstract
RATIONALE AND OBJECTIVES Preoperative accurate identification of benign and malignant breast lesions is vital for patients to achieve individualized treatment. This study aimed to develop and validate a mammography-based radiomic nomogram for predicting malignant risk of breast suspicious microcalcifications (MCs). MATERIALS AND METHODS 496 patients with histologically confirmed breast suspicious MCs were randomly divided into the training set (n = 346) and validation set (n = 150). Radiomics features was extracted from the craniocaudal and mediolateral oblique images. Least absolute shrinkage and selection operator algorithm were used to select radiomics features, then radiomics score (Rad-score) was calculated. Univariate analysis was used to identify malignant MCs-related clinical independent risk factors. Multivariate logistic regression was used to establish a clinical-radiomics model by incorporating Rad-score and clinic factors. A nomogram was developed to visualize the clinical-radiomics model. The receiver operating characteristic curve, calibration curve and decision curve analysis (DCA) were used to evaluate the performance of the nomogram. RESULTS The Rad-score was consisted of 29 optimal radiomics features. We developed a nomogram by incorporating Rad-score, menopause status, MCs morphology and distribution, the area under the curve value of the combined model was 0.926(95% confidence interval [CI]: 0.878-0.975) for the validation set. The calibration curves and DCA indicated the combined model had favorable calibration and clinical utility. CONCLUSION The combined model could be considered as a potential imaging marker to predict malignant risk of breast suspicious MCs.
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Affiliation(s)
- Yusi Chen
- Department of Radiology, The Second Affiliated Hospital of Harbin Medical University, Harbin 150086, China (Y.C., H.J., J.L., J.Z.)
| | - Huijie Jiang
- Department of Radiology, The Second Affiliated Hospital of Harbin Medical University, Harbin 150086, China (Y.C., H.J., J.L., J.Z.).
| | - Jinping Li
- Department of Radiology, The Second Affiliated Hospital of Harbin Medical University, Harbin 150086, China (Y.C., H.J., J.L., J.Z.)
| | - Jin Zhang
- Department of Radiology, The Second Affiliated Hospital of Harbin Medical University, Harbin 150086, China (Y.C., H.J., J.L., J.Z.)
| | - Peng Wu
- Department of Radiology, The Sixth Affiliated Hospital of Harbin Medical University, Harbin 150086, China (P.W.)
| | - Zhengjun Dai
- Huiying Medical Technology Co., Ltd, Beijing 100192, China (Z.D.)
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Rai HM, Yoo J. A comprehensive analysis of recent advancements in cancer detection using machine learning and deep learning models for improved diagnostics. J Cancer Res Clin Oncol 2023; 149:14365-14408. [PMID: 37540254 DOI: 10.1007/s00432-023-05216-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Accepted: 07/26/2023] [Indexed: 08/05/2023]
Abstract
PURPOSE There are millions of people who lose their life due to several types of fatal diseases. Cancer is one of the most fatal diseases which may be due to obesity, alcohol consumption, infections, ultraviolet radiation, smoking, and unhealthy lifestyles. Cancer is abnormal and uncontrolled tissue growth inside the body which may be spread to other body parts other than where it has originated. Hence it is very much required to diagnose the cancer at an early stage to provide correct and timely treatment. Also, manual diagnosis and diagnostic error may cause of the death of many patients hence much research are going on for the automatic and accurate detection of cancer at early stage. METHODS In this paper, we have done the comparative analysis of the diagnosis and recent advancement for the detection of various cancer types using traditional machine learning (ML) and deep learning (DL) models. In this study, we have included four types of cancers, brain, lung, skin, and breast and their detection using ML and DL techniques. In extensive review we have included a total of 130 pieces of literature among which 56 are of ML-based and 74 are from DL-based cancer detection techniques. Only the peer reviewed research papers published in the recent 5-year span (2018-2023) have been included for the analysis based on the parameters, year of publication, feature utilized, best model, dataset/images utilized, and best accuracy. We have reviewed ML and DL-based techniques for cancer detection separately and included accuracy as the performance evaluation metrics to maintain the homogeneity while verifying the classifier efficiency. RESULTS Among all the reviewed literatures, DL techniques achieved the highest accuracy of 100%, while ML techniques achieved 99.89%. The lowest accuracy achieved using DL and ML approaches were 70% and 75.48%, respectively. The difference in accuracy between the highest and lowest performing models is about 28.8% for skin cancer detection. In addition, the key findings, and challenges for each type of cancer detection using ML and DL techniques have been presented. The comparative analysis between the best performing and worst performing models, along with overall key findings and challenges, has been provided for future research purposes. Although the analysis is based on accuracy as the performance metric and various parameters, the results demonstrate a significant scope for improvement in classification efficiency. CONCLUSION The paper concludes that both ML and DL techniques hold promise in the early detection of various cancer types. However, the study identifies specific challenges that need to be addressed for the widespread implementation of these techniques in clinical settings. The presented results offer valuable guidance for future research in cancer detection, emphasizing the need for continued advancements in ML and DL-based approaches to improve diagnostic accuracy and ultimately save more lives.
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Affiliation(s)
- Hari Mohan Rai
- School of Computing, Gachon University, 1342 Seongnam-daero, Sujeong-gu, Seongnam-si, 13120, Gyeonggi-do, Republic of Korea.
| | - Joon Yoo
- School of Computing, Gachon University, 1342 Seongnam-daero, Sujeong-gu, Seongnam-si, 13120, Gyeonggi-do, Republic of Korea
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11
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Pati A, Parhi M, Pattanayak BK, Singh D, Singh V, Kadry S, Nam Y, Kang BG. Breast Cancer Diagnosis Based on IoT and Deep Transfer Learning Enabled by Fog Computing. Diagnostics (Basel) 2023; 13:2191. [PMID: 37443585 DOI: 10.3390/diagnostics13132191] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Revised: 06/18/2023] [Accepted: 06/19/2023] [Indexed: 07/15/2023] Open
Abstract
Across all countries, both developing and developed, women face the greatest risk of breast cancer. Patients who have their breast cancer diagnosed and staged early have a better chance of receiving treatment before the disease spreads. The automatic analysis and classification of medical images are made possible by today's technology, allowing for quicker and more accurate data processing. The Internet of Things (IoT) is now crucial for the early and remote diagnosis of chronic diseases. In this study, mammography images from the publicly available online repository The Cancer Imaging Archive (TCIA) were used to train a deep transfer learning (DTL) model for an autonomous breast cancer diagnostic system. The data were pre-processed before being fed into the model. A popular deep learning (DL) technique, i.e., convolutional neural networks (CNNs), was combined with transfer learning (TL) techniques such as ResNet50, InceptionV3, AlexNet, VGG16, and VGG19 to boost prediction accuracy along with a support vector machine (SVM) classifier. Extensive simulations were analyzed by employing a variety of performances and network metrics to demonstrate the viability of the proposed paradigm. Outperforming some current works based on mammogram images, the experimental accuracy, precision, sensitivity, specificity, and f1-scores reached 97.99%, 99.51%, 98.43%, 80.08%, and 98.97%, respectively, on the huge dataset of mammography images categorized as benign and malignant, respectively. Incorporating Fog computing technologies, this model safeguards the privacy and security of patient data, reduces the load on centralized servers, and increases the output.
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Affiliation(s)
- Abhilash Pati
- Department of Computer Science and Engineering, Faculty of Engineering and Technology (ITER), Siksha 'O' Anusandhan (Deemed to be University), Bhubaneswar 751030, India
| | - Manoranjan Parhi
- Centre for Data Sciences, Faculty of Engineering and Technology (ITER), Siksha 'O' Anusandhan (Deemed to be University), Bhubaneswar 751030, India
| | - Binod Kumar Pattanayak
- Department of Computer Science and Engineering, Faculty of Engineering and Technology (ITER), Siksha 'O' Anusandhan (Deemed to be University), Bhubaneswar 751030, India
| | - Debabrata Singh
- Department of Computer Applications, Faculty of Engineering and Technology (ITER), Siksha 'O' Anusandhan (Deemed to be University), Bhubaneswar 751030, India
| | - Vijendra Singh
- School of Computer Science, University of Petroleum and Energy Studies, Dehradun 248007, India
| | - Seifedine Kadry
- Department of Applied Data Science, Noroff University College, 4612 Kristiansand, Norway
- Artificial Intelligence Research Center (AIRC), Ajman University, Ajman 346, United Arab Emirates
- Department of Electrical and Computer Engineering, Lebanese American University, Byblos P.O. Box 13-5053, Lebanon
- MEU Research Unit, Middle East University, Amman 11831, Jordan
| | - Yunyoung Nam
- Department of ICT Convergence, Soonchunhyang University, Asan 31538, Republic of Korea
| | - Byeong-Gwon Kang
- Department of ICT Convergence, Soonchunhyang University, Asan 31538, Republic of Korea
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12
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Rehman SU, Khan MA, Masood A, Almujally NA, Baili J, Alhaisoni M, Tariq U, Zhang YD. BRMI-Net: Deep Learning Features and Flower Pollination-Controlled Regula Falsi-Based Feature Selection Framework for Breast Cancer Recognition in Mammography Images. Diagnostics (Basel) 2023; 13:diagnostics13091618. [PMID: 37175009 PMCID: PMC10178634 DOI: 10.3390/diagnostics13091618] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 04/16/2023] [Accepted: 04/26/2023] [Indexed: 05/15/2023] Open
Abstract
The early detection of breast cancer using mammogram images is critical for lowering women's mortality rates and allowing for proper treatment. Deep learning techniques are commonly used for feature extraction and have demonstrated significant performance in the literature. However, these features do not perform well in several cases due to redundant and irrelevant information. We created a new framework for diagnosing breast cancer using entropy-controlled deep learning and flower pollination optimization from the mammogram images. In the proposed framework, a filter fusion-based method for contrast enhancement is developed. The pre-trained ResNet-50 model is then improved and trained using transfer learning on both the original and enhanced datasets. Deep features are extracted and combined into a single vector in the following phase using a serial technique known as serial mid-value features. The top features are then classified using neural networks and machine learning classifiers in the following stage. To accomplish this, a technique for flower pollination optimization with entropy control has been developed. The exercise used three publicly available datasets: CBIS-DDSM, INbreast, and MIAS. On these selected datasets, the proposed framework achieved 93.8, 99.5, and 99.8% accuracy, respectively. Compared to the current methods, the increase in accuracy and decrease in computational time are explained.
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Affiliation(s)
- Shams Ur Rehman
- Department of Computer Science, HITEC University, Taxila 47080, Pakistan
| | | | - Anum Masood
- Department of Circulation and Medical Imaging, Faculty of Medicine and Health Sciences, Norwegian University of Science and Technology (NTNU), 7491 Trondheim, Norway
| | - Nouf Abdullah Almujally
- Department of Information Systems, College of Computer and Information Sciences, Princess Nourah bint Abdulrahman University, P.O. Box 84428, Riyadh 11671, Saudi Arabia
| | - Jamel Baili
- College of Computer Science, King Khalid University, Abha 61413, Saudi Arabia
| | - Majed Alhaisoni
- College of Computer Science and Engineering, University of Ha'il, Ha'il 81451, Saudi Arabia
| | - Usman Tariq
- Management Information System Department, College of Business Administration, Prince Sattam Bin Abdulaziz University, Al-Kharj 16278, Saudi Arabia
| | - Yu-Dong Zhang
- Department of Informatics, University of Leicester, Leicester LE1 7RH, UK
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13
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Loizidou K, Elia R, Pitris C. Computer-aided breast cancer detection and classification in mammography: A comprehensive review. Comput Biol Med 2023; 153:106554. [PMID: 36646021 DOI: 10.1016/j.compbiomed.2023.106554] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 12/13/2022] [Accepted: 01/11/2023] [Indexed: 01/15/2023]
Abstract
Cancer is the second cause of mortality worldwide and it has been identified as a perilous disease. Breast cancer accounts for ∼20% of all new cancer cases worldwide, making it a major cause of morbidity and mortality. Mammography is an effective screening tool for the early detection and management of breast cancer. However, the identification and interpretation of breast lesions is challenging even for expert radiologists. For that reason, several Computer-Aided Diagnosis (CAD) systems are being developed to assist radiologists to accurately detect and/or classify breast cancer. This review examines the recent literature on the automatic detection and/or classification of breast cancer in mammograms, using both conventional feature-based machine learning and deep learning algorithms. The review begins with a comparison of algorithms developed specifically for the detection and/or classification of two types of breast abnormalities, micro-calcifications and masses, followed by the use of sequential mammograms for improving the performance of the algorithms. The available Food and Drug Administration (FDA) approved CAD systems related to triage and diagnosis of breast cancer in mammograms are subsequently presented. Finally, a description of the open access mammography datasets is provided and the potential opportunities for future work in this field are highlighted. The comprehensive review provided here can serve both as a thorough introduction to the field but also provide indicative directions to guide future applications.
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Affiliation(s)
- Kosmia Loizidou
- KIOS Research and Innovation Center of Excellence, Department of Electrical and Computer Engineering, University of Cyprus, Nicosia, Cyprus.
| | - Rafaella Elia
- KIOS Research and Innovation Center of Excellence, Department of Electrical and Computer Engineering, University of Cyprus, Nicosia, Cyprus.
| | - Costas Pitris
- KIOS Research and Innovation Center of Excellence, Department of Electrical and Computer Engineering, University of Cyprus, Nicosia, Cyprus.
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14
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Hsu SY, Wang CY, Kao YK, Liu KY, Lin MC, Yeh LR, Wang YM, Chen CI, Kao FC. Using Deep Neural Network Approach for Multiple-Class Assessment of Digital Mammography. Healthcare (Basel) 2022; 10:healthcare10122382. [PMID: 36553906 PMCID: PMC9778490 DOI: 10.3390/healthcare10122382] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Revised: 11/16/2022] [Accepted: 11/25/2022] [Indexed: 11/29/2022] Open
Abstract
According to the Health Promotion Administration in the Ministry of Health and Welfare statistics in Taiwan, over ten thousand women have breast cancer every year. Mammography is widely used to detect breast cancer. However, it is limited by the operator's technique, the cooperation of the subjects, and the subjective interpretation by the physician. It results in inconsistent identification. Therefore, this study explores the use of a deep neural network algorithm for the classification of mammography images. In the experimental design, a retrospective study was used to collect imaging data from actual clinical cases. The mammography images were collected and classified according to the breast image reporting and data-analyzing system (BI-RADS). In terms of model building, a fully convolutional dense connection network (FC-DCN) is used for the network backbone. All the images were obtained through image preprocessing, a data augmentation method, and transfer learning technology to build a mammography image classification model. The research results show the model's accuracy, sensitivity, and specificity were 86.37%, 100%, and 72.73%, respectively. Based on the FC-DCN model framework, it can effectively reduce the number of training parameters and successfully obtain a reasonable image classification model for mammography.
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Affiliation(s)
- Shih-Yen Hsu
- Department of Information Engineering, I-Shou University, Kaohsiung City 84001, Taiwan
| | - Chi-Yuan Wang
- Department of Medical Imaging and Radiological Science, I-Shou University, Kaohsiung City 82445, Taiwan
| | - Yi-Kai Kao
- Division of Colorectal Surgery, Department of Surgery, E-DA Hospital, Kaohsiung City 82445, Taiwan
| | - Kuo-Ying Liu
- Department of Radiology, E-DA Cancer Hospital, I-Shou University, Kaohsiung City 82445, Taiwan
| | - Ming-Chia Lin
- Department of Nuclear Medicine, E-DA Hospital, I-Shou University, Kaohsiung City 82445, Taiwan
| | - Li-Ren Yeh
- Department of Anesthesiology, E-DA Cancer Hospital, I-Shou University, Kaohsiung City 82445, Taiwan
- Department of Medical Imaging and Radiology, Shu-Zen College of Medicine and Management, Kaohsiung City 82144, Taiwan
| | - Yi-Ming Wang
- Department of Information Engineering, I-Shou University, Kaohsiung City 84001, Taiwan
- Department of Critical Care Medicine, E-DA Hospital, I-Shou University, Kaohsiung City 82445, Taiwan
| | - Chih-I Chen
- Division of Colon and Rectal Surgery, Department of Surgery, E-DA Hospital, Kaohsiung City 82445, Taiwan
- Division of General Medicine Surgery, Department of Surgery, E-DA Hospital, Kaohsiung City 82445, Taiwan
- School of Medicine, College of Medicine, I-Shou University, Kaohsiung City 82445, Taiwan
- The School of Chinese Medicine for Post Baccalaureate, I-Shou University, Kaohsiung City 82445, Taiwan
- Correspondence: (C.-I.C.); (F.-C.K.)
| | - Feng-Chen Kao
- School of Medicine, College of Medicine, I-Shou University, Kaohsiung City 82445, Taiwan
- Department of Orthopedics, E-DA Hospital, Kaohsiung City 82445, Taiwan
- Department of Orthopedics, Dachang Hospital, Kaohsiung City 82445, Taiwan
- Correspondence: (C.-I.C.); (F.-C.K.)
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15
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Gao F, Lu DC, Zheng TL, Geng S, Sha JC, Huang OY, Tang LJ, Zhu PW, Li YY, Chen LL, Targher G, Byrne CD, Huang ZF, Zheng MH. Fully connected neural network-based serum surface-enhanced Raman spectroscopy accurately identifies non-alcoholic steatohepatitis. Hepatol Int 2022; 17:339-349. [PMID: 36369430 PMCID: PMC9651904 DOI: 10.1007/s12072-022-10444-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/13/2022] [Accepted: 10/23/2022] [Indexed: 11/13/2022]
Abstract
BACKGROUND/PURPOSE OF THE STUDY There is a need to find a standardized and low-risk diagnostic tool that can non-invasively detect non-alcoholic steatohepatitis (NASH). Surface enhanced Raman spectroscopy (SERS), which is a technique combining Raman spectroscopy (RS) with nanotechnology, has recently received considerable attention due to its potential for improving medical diagnostics. We aimed to investigate combining SERS and neural network approaches, using a liver biopsy dataset to develop and validate a new diagnostic model for non-invasively identifying NASH. METHODS Silver nanoparticles as the SERS-active nanostructures were mixed with blood serum to enhance the Raman scattering signals. The spectral data set was used to train the NASH classification model by a neural network primarily consisting of a fully connected residual module. RESULTS Data on 261 Chinese individuals with biopsy-proven NAFLD were included and a prediction model for NASH was built based on SERS spectra and neural network approaches. The model yielded an AUROC of 0.83 (95% confidence interval [CI] 0.70-0.92) in the validation set, which was better than AUROCs of both serum CK-18-M30 levels (AUROC 0.63, 95% CI 0.48-0.76, p = 0.044) and the HAIR score (AUROC 0.65, 95% CI 0.51-0.77, p = 0.040). Subgroup analyses showed that the model performed well in different patient subgroups. CONCLUSIONS Fully connected neural network-based serum SERS analysis is a rapid and practical tool for the non-invasive identification of NASH. The online calculator website for the estimated risk of NASH is freely available to healthcare providers and researchers ( http://www.pan-chess.cn/calculator/RAMAN_score ).
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Affiliation(s)
- Feng Gao
- Department of Gastroenterology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, China
| | - De-Chan Lu
- Key Laboratory of Opto-Electronic Science and Technology for Medicine of Ministry of Education, Fujian Provincial Key Laboratory for Photonics Technology, Fujian Normal University, Fuzhou, 350000, China
| | - Tian-Lei Zheng
- Artificial Intelligence Unit, Department of Medical Equipment Management, Affiliated Hospital of Xuzhou Medical University, Xuzhou, China
- School of Information and Control Engineering, China University of Mining and Technology, Xuzhou, China
| | - Shi Geng
- Artificial Intelligence Unit, Department of Medical Equipment Management, Affiliated Hospital of Xuzhou Medical University, Xuzhou, China
| | - Jun-Cheng Sha
- Interventional Radiology, Affiliated Hospital of Xuzhou Medical University, Xuzhou, China
| | - Ou-Yang Huang
- NAFLD Research Center, Department of Hepatology, The First Affiliated Hospital of Wenzhou Medical University, No. 2 Fuxue Lane, Wenzhou, 325000, China
| | - Liang-Jie Tang
- NAFLD Research Center, Department of Hepatology, The First Affiliated Hospital of Wenzhou Medical University, No. 2 Fuxue Lane, Wenzhou, 325000, China
| | - Pei-Wu Zhu
- Department of Laboratory Medicine, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, China
| | - Yang-Yang Li
- Department of Pathology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, China
| | - Li-Li Chen
- NAFLD Research Center, Department of Hepatology, The First Affiliated Hospital of Wenzhou Medical University, No. 2 Fuxue Lane, Wenzhou, 325000, China
| | - Giovanni Targher
- Section of Endocrinology, Diabetes and Metabolism, Department of Medicine, University and Azienda Ospedaliera Universitaria Integrata of Verona, Verona, Italy
| | - Christopher D Byrne
- Southampton National Institute for Health Research Biomedical Research Centre, University Hospital Southampton, Southampton General Hospital, Southampton, UK
| | - Zu-Fang Huang
- Key Laboratory of Opto-Electronic Science and Technology for Medicine of Ministry of Education, Fujian Provincial Key Laboratory for Photonics Technology, Fujian Normal University, Fuzhou, 350000, China.
| | - Ming-Hua Zheng
- NAFLD Research Center, Department of Hepatology, The First Affiliated Hospital of Wenzhou Medical University, No. 2 Fuxue Lane, Wenzhou, 325000, China.
- Key Laboratory of Diagnosis and Treatment for the Development of Chronic Liver Disease in Zhejiang Province, Wenzhou, China.
- Institute of Hepatology, Wenzhou Medical University, Wenzhou, China.
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16
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Leong YS, Hasikin K, Lai KW, Mohd Zain N, Azizan MM. Microcalcification Discrimination in Mammography Using Deep Convolutional Neural Network: Towards Rapid and Early Breast Cancer Diagnosis. Front Public Health 2022; 10:875305. [PMID: 35570962 PMCID: PMC9096221 DOI: 10.3389/fpubh.2022.875305] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Accepted: 04/04/2022] [Indexed: 11/30/2022] Open
Abstract
Breast cancer is among the most common types of cancer in women and under the cases of misdiagnosed, or delayed in treatment, the mortality risk is high. The existence of breast microcalcifications is common in breast cancer patients and they are an effective indicator for early sign of breast cancer. However, microcalcifications are often missed and wrongly classified during screening due to their small sizes and indirect scattering in mammogram images. Motivated by this issue, this project proposes an adaptive transfer learning deep convolutional neural network in segmenting breast mammogram images with calcifications cases for early breast cancer diagnosis and intervention. Mammogram images of breast microcalcifications are utilized to train several deep neural network models and their performance is compared. Image filtering of the region of interest images was conducted to remove possible artifacts and noises to enhance the quality of the images before the training. Different hyperparameters such as epoch, batch size, etc were tuned to obtain the best possible result. In addition, the performance of the proposed fine-tuned hyperparameter of ResNet50 is compared with another state-of-the-art machine learning network such as ResNet34, VGG16, and AlexNet. Confusion matrices were utilized for comparison. The result from this study shows that the proposed ResNet50 achieves the highest accuracy with a value of 97.58%, followed by ResNet34 of 97.35%, VGG16 96.97%, and finally AlexNet of 83.06%.
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Affiliation(s)
- Yew Sum Leong
- Department of Biomedical Engineering, Faculty of Engineering, Universiti Malaya, Kuala Lumpur, Malaysia
| | - Khairunnisa Hasikin
- Department of Biomedical Engineering, Faculty of Engineering, Universiti Malaya, Kuala Lumpur, Malaysia.,Department of Biomedical Engineering, Center for Image and Signal Processing (CISIP), Faculty of Engineering, Universiti Malaya, Kuala Lumpur, Malaysia
| | - Khin Wee Lai
- Department of Biomedical Engineering, Faculty of Engineering, Universiti Malaya, Kuala Lumpur, Malaysia
| | - Norita Mohd Zain
- Department of Biomedical Engineering, Faculty of Engineering, Universiti Malaya, Kuala Lumpur, Malaysia
| | - Muhammad Mokhzaini Azizan
- Department of Electrical and Electronic Engineering, Faculty of Engineering and Built Environment, Universiti Sains Islam Malaysia, Nilai, Malaysia
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17
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Shah SM, Khan RA, Arif S, Sajid U. Artificial intelligence for breast cancer analysis: Trends & directions. Comput Biol Med 2022; 142:105221. [PMID: 35016100 DOI: 10.1016/j.compbiomed.2022.105221] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2021] [Revised: 01/03/2022] [Accepted: 01/03/2022] [Indexed: 12/18/2022]
Abstract
Breast cancer is one of the leading causes of death among women. Early detection of breast cancer can significantly improve the lives of millions of women across the globe. Given importance of finding solution/framework for early detection and diagnosis, recently many AI researchers are focusing to automate this task. The other reasons for surge in research activities in this direction are advent of robust AI algorithms (deep learning), availability of hardware that can run/train those robust and complex AI algorithms and accessibility of large enough dataset required for training AI algorithms. Different imaging modalities that have been exploited by researchers to automate the task of breast cancer detection are mammograms, ultrasound, magnetic resonance imaging, histopathological images or any combination of them. This article analyzes these imaging modalities and presents their strengths and limitations. It also enlists resources from where their datasets can be accessed for research purpose. This article then summarizes AI and computer vision based state-of-the-art methods proposed in the last decade to detect breast cancer using various imaging modalities. Primarily, in this article we have focused on reviewing frameworks that have reported results using mammograms as it is the most widely used breast imaging modality that serves as the first test that medical practitioners usually prescribe for the detection of breast cancer. Another reason for focusing on mammogram imaging modalities is the availability of its labelled datasets. Datasets availability is one of the most important aspects for the development of AI based frameworks as such algorithms are data hungry and generally quality of dataset affects performance of AI based algorithms. In a nutshell, this research article will act as a primary resource for the research community working in the field of automated breast imaging analysis.
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Affiliation(s)
- Shahid Munir Shah
- Department of Computer Science, Faculty of Information Technology, Salim Habib University, Karachi, Pakistan
| | - Rizwan Ahmed Khan
- Department of Computer Science, Faculty of Information Technology, Salim Habib University, Karachi, Pakistan.
| | - Sheeraz Arif
- Department of Computer Science, Faculty of Information Technology, Salim Habib University, Karachi, Pakistan
| | - Unaiza Sajid
- Department of Computer Science, Faculty of Information Technology, Salim Habib University, Karachi, Pakistan
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18
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Ali S, Li J, Pei Y, Khurram R, Rehman KU, Rasool AB. State-of-the-Art Challenges and Perspectives in Multi-Organ Cancer Diagnosis via Deep Learning-Based Methods. Cancers (Basel) 2021; 13:5546. [PMID: 34771708 PMCID: PMC8583666 DOI: 10.3390/cancers13215546] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2021] [Revised: 10/28/2021] [Accepted: 10/29/2021] [Indexed: 11/16/2022] Open
Abstract
Thus far, the most common cause of death in the world is cancer. It consists of abnormally expanding areas that are threatening to human survival. Hence, the timely detection of cancer is important to expanding the survival rate of patients. In this survey, we analyze the state-of-the-art approaches for multi-organ cancer detection, segmentation, and classification. This article promptly reviews the present-day works in the breast, brain, lung, and skin cancer domain. Afterwards, we analytically compared the existing approaches to provide insight into the ongoing trends and future challenges. This review also provides an objective description of widely employed imaging techniques, imaging modality, gold standard database, and related literature on each cancer in 2016-2021. The main goal is to systematically examine the cancer diagnosis systems for multi-organs of the human body as mentioned. Our critical survey analysis reveals that greater than 70% of deep learning researchers attain promising results with CNN-based approaches for the early diagnosis of multi-organ cancer. This survey includes the extensive discussion part along with current research challenges, possible solutions, and prospects. This research will endow novice researchers with valuable information to deepen their knowledge and also provide the room to develop new robust computer-aid diagnosis systems, which assist health professionals in bridging the gap between rapid diagnosis and treatment planning for cancer patients.
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Affiliation(s)
- Saqib Ali
- Faculty of Information Technology, Beijing University of Technology, Beijing 100124, China; (S.A.); (J.L.); (K.u.R.)
| | - Jianqiang Li
- Faculty of Information Technology, Beijing University of Technology, Beijing 100124, China; (S.A.); (J.L.); (K.u.R.)
| | - Yan Pei
- Computer Science Division, University of Aizu, Aizuwakamatsu 965-8580, Japan
| | - Rooha Khurram
- Beijing Key Laboratory for Green Catalysis and Separation, Department of Chemistry and Chemical Engineering, Beijing University of Technology, Beijing 100124, China;
| | - Khalil ur Rehman
- Faculty of Information Technology, Beijing University of Technology, Beijing 100124, China; (S.A.); (J.L.); (K.u.R.)
| | - Abdul Basit Rasool
- Research Institute for Microwave and Millimeter-Wave (RIMMS), National University of Sciences and Technology (NUST), Islamabad 44000, Pakistan;
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19
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Mahmood T, Li J, Pei Y, Akhtar F. An Automated In-Depth Feature Learning Algorithm for Breast Abnormality Prognosis and Robust Characterization from Mammography Images Using Deep Transfer Learning. BIOLOGY 2021; 10:859. [PMID: 34571736 PMCID: PMC8468800 DOI: 10.3390/biology10090859] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Revised: 08/25/2021] [Accepted: 08/27/2021] [Indexed: 01/17/2023]
Abstract
BACKGROUND Diagnosing breast cancer masses and calcification clusters have paramount significance in mammography, which aids in mitigating the disease's complexities and curing it at early stages. However, a wrong mammogram interpretation may lead to an unnecessary biopsy of the false-positive findings, which reduces the patient's survival chances. Consequently, approaches that learn to discern breast masses can reduce the number of misconceptions and incorrect diagnoses. Conventionally used classification models focus on feature extraction techniques specific to a particular problem based on domain information. Deep learning strategies are becoming promising alternatives to solve the many challenges of feature-based approaches. METHODS This study introduces a convolutional neural network (ConvNet)-based deep learning method to extract features at varying densities and discern mammography's normal and suspected regions. Two different experiments were carried out to make an accurate diagnosis and classification. The first experiment consisted of five end-to-end pre-trained and fine-tuned deep convolution neural networks (DCNN). The in-depth features extracted from the ConvNet are also used to train the support vector machine algorithm to achieve excellent performance in the second experiment. Additionally, DCNN is the most frequently used image interpretation and classification method, including VGGNet, GoogLeNet, MobileNet, ResNet, and DenseNet. Moreover, this study pertains to data cleaning, preprocessing, and data augmentation, and improving mass recognition accuracy. The efficacy of all models is evaluated by training and testing three mammography datasets and has exhibited remarkable results. RESULTS Our deep learning ConvNet+SVM model obtained a discriminative training accuracy of 97.7% and validating accuracy of 97.8%, contrary to this, VGGNet16 method yielded 90.2%, 93.5% for VGGNet19, 63.4% for GoogLeNet, 82.9% for MobileNetV2, 75.1% for ResNet50, and 72.9% for DenseNet121. CONCLUSIONS The proposed model's improvement and validation are appropriated in conventional pathological practices that conceivably reduce the pathologist's strain in predicting clinical outcomes by analyzing patients' mammography images.
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Affiliation(s)
- Tariq Mahmood
- The School of Software Engineering, Beijing University of Technology, Beijing 100024, China; (T.M.); (J.L.)
- Division of Science and Technology, University of Education, Lahore 54000, Pakistan
| | - Jianqiang Li
- The School of Software Engineering, Beijing University of Technology, Beijing 100024, China; (T.M.); (J.L.)
- Beijing Engineering Research Center for IoT Software and Systems, Beijing 100124, China
| | - Yan Pei
- Computer Science Division, University of Aizu, Aizuwakamatsu 965-8580, Japan
| | - Faheem Akhtar
- Department of Computer Science, Sukkur IBA University, Sukkur 65200, Pakistan;
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