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Wang C, Pei J, Li H, Zhu X, Zhang Y, Wang Y, Li W, Wang Z, Liu K, Du B, Jiang J, Zhao D. Mechanisms on salt tolerant of Paenibacillus polymyxa SC2 and its growth-promoting effects on maize seedlings under saline conditions. Microbiol Res 2024; 282:127639. [PMID: 38354626 DOI: 10.1016/j.micres.2024.127639] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2023] [Revised: 02/05/2024] [Accepted: 02/05/2024] [Indexed: 02/16/2024]
Abstract
Soil salinity negatively affects microbial communities, soil fertility, and agricultural productivity and has become a major agricultural problem worldwide. Plant growth-promoting rhizobacteria (PGPR) with salt tolerance can benefit plant growth under saline conditions and diminish the negative effects of salt stress on plants. In this study, we aimed to understand the salt-tolerance mechanism of Paenibacillus polymyxa at the genetic and metabolic levels and elucidate the mechanism of strain SC2 in promoting maize growth under saline conditions. Under salt stress, we found that strain SC2 promoted maize seedling growth, which was accompanied by a significant upregulation of genes encoding for the biosynthesis of peptidoglycan, polysaccharide, and fatty acid, the metabolism of purine and pyrimidine, and the transport of osmoprotectants such as trehalose, glycine betaine, and K+ in strain SC2. To further enhance the salt resistance of strain SC2, three mutants (SC2-11, SC2-13, and SC2-14) with higher capacities for salt resistance and exopolysaccharide synthesis were obtained via atmospheric and room-temperature plasma mutagenesis. In saline-alkaline soil, the mutants showed better promoting effect on maize seedlings than wild-type SC2. The fresh weight of maize seedlings was increased by 68.10% after treatment with SC2-11 compared with that of the control group. The transcriptome analysis of maize roots demonstrated that SC2 and SC2-11 could induce the upregulation of genes related to the plant hormone signal transduction, starch and sucrose metabolism, reactive oxygen species scavenging, and auxin and ethylene signaling under saline-alkaline stress. In addition, various transcription factors, such as zinc finger proteins, ethylene-responsive-element-binding protein, WRKY, myeloblastosis proteins, basic helix-loop-helix proteins, and NAC proteins, were up-regulated in response to abiotic stress. Moreover, the microbial community composition of maize rhizosphere soil after inoculating with strain SC2 was varied from the one after inoculating with mutant SC2-11. Our results provide new insights into the various genes involved in the salt resistance of strain SC2 and a theoretical basis for utilizing P. polymyxa in saline-alkaline environments.
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Affiliation(s)
- Chengqiang Wang
- College of Life Sciences, Shandong Engineering Research Center of Plant-Microbia Restoration for Saline-alkali Land, Shandong Key Laboratory of Agricultural Microbiology, National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Shandong Agricultural University, Tai'an 271018, China.
| | - Jian Pei
- College of Life Sciences, Shandong Engineering Research Center of Plant-Microbia Restoration for Saline-alkali Land, Shandong Key Laboratory of Agricultural Microbiology, National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Shandong Agricultural University, Tai'an 271018, China
| | - Hui Li
- College of Life Sciences, Shandong Engineering Research Center of Plant-Microbia Restoration for Saline-alkali Land, Shandong Key Laboratory of Agricultural Microbiology, National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Shandong Agricultural University, Tai'an 271018, China
| | - Xiuling Zhu
- College of Life Sciences, Shandong Engineering Research Center of Plant-Microbia Restoration for Saline-alkali Land, Shandong Key Laboratory of Agricultural Microbiology, National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Shandong Agricultural University, Tai'an 271018, China
| | - Yanan Zhang
- College of Life Sciences, Shandong Engineering Research Center of Plant-Microbia Restoration for Saline-alkali Land, Shandong Key Laboratory of Agricultural Microbiology, National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Shandong Agricultural University, Tai'an 271018, China
| | - Yanjun Wang
- Institute of Wetland Agriculture and Ecology, Shandong Academy of Agricultural Sciences, Jinan 250100, China
| | - Wenjie Li
- College of Life Sciences, Shandong Engineering Research Center of Plant-Microbia Restoration for Saline-alkali Land, Shandong Key Laboratory of Agricultural Microbiology, National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Shandong Agricultural University, Tai'an 271018, China
| | - Zhongyue Wang
- College of Life Sciences, Shandong Engineering Research Center of Plant-Microbia Restoration for Saline-alkali Land, Shandong Key Laboratory of Agricultural Microbiology, National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Shandong Agricultural University, Tai'an 271018, China
| | - Kai Liu
- College of Life Sciences, Shandong Engineering Research Center of Plant-Microbia Restoration for Saline-alkali Land, Shandong Key Laboratory of Agricultural Microbiology, National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Shandong Agricultural University, Tai'an 271018, China
| | - Binghai Du
- College of Life Sciences, Shandong Engineering Research Center of Plant-Microbia Restoration for Saline-alkali Land, Shandong Key Laboratory of Agricultural Microbiology, National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Shandong Agricultural University, Tai'an 271018, China
| | - Juquan Jiang
- Department of Microbiology and Biotechnology, College of Life Sciences, Northeast Agricultural University, Harbin 150030, China.
| | - Dongying Zhao
- College of Life Sciences, Shandong Engineering Research Center of Plant-Microbia Restoration for Saline-alkali Land, Shandong Key Laboratory of Agricultural Microbiology, National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, Shandong Agricultural University, Tai'an 271018, China; College of Life Sciences, Dezhou University, Dezhou 253023, China.
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You X, Wang S, Du L, Chen Y, Wang T, Bo X. Metagenomics reveals the variations in functional metabolism associated with greenhouse gas emissions during legume-vegetable rotation process. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2024; 275:116268. [PMID: 38569319 DOI: 10.1016/j.ecoenv.2024.116268] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Revised: 03/21/2024] [Accepted: 03/26/2024] [Indexed: 04/05/2024]
Abstract
Legume-based rotation is commonly recognized for its mitigation efficiency of greenhouse gas (GHG) emissions. However, variations in GHG emission-associated metabolic functions during the legume-vegetable rotation process remain largely uncharacterized. Accordingly, a soybean-radish rotation field experiment was designed to clarify the responses of microbial communities and their GHG emission-associated functional metabolism through metagenomics. The results showed that the contents of soil organic carbon and total phosphorus significantly decreased during the soybean-radish process (P < 0.05), while soil total potassium content and bacterial richness and diversity significantly increased (P < 0.05). Moreover, the predominant bacterial phyla varied, with a decrease in the relative abundance of Proteobacteria and an increase in the relative abundance of Acidobacteria, Gemmatimonadetes, and Chloroflexi. Metagenomics clarified that bacterial carbohydrate metabolism substantially increased during the rotation process, whereas formaldehyde assimilation, methanogenesis, nitrification, and dissimilatory nitrate reduction decreased (P < 0.05). Specifically, the expression of phosphate acetyltransferase (functional methanogenesis gene, pta) and nitrate reductase gamma subunit (functional dissimilatory nitrate reduction gene, narI) was inhibited, indicating of low methane production and nitrogen metabolism. Additionally, the partial least squares path model revealed that the Shannon diversity index was negatively correlated with methane and nitrogen metabolism (P < 0.01), further demonstrating that the response of the soil bacterial microbiome responses are closely linked with GHG-associated metabolism during the soybean-radish rotation process. Collectively, our findings shed light on the responses of soil microbial communities to functional metabolism associated with GHG emissions and provide important insights to mitigate GHG emissions during the rotational cropping of legumes and vegetables.
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Affiliation(s)
- Xinxin You
- Institute of Eco-environmental Sciences, Wenzhou Academy of Agricultural Sciences, Wenzhou 325006, PR China; Southern Zhejiang Key Laboratory of Crop Breeding, Wenzhou Academy of Agricultural Sciences, Wenzhou 325006, PR China
| | - Sheng Wang
- Institute of Eco-environmental Sciences, Wenzhou Academy of Agricultural Sciences, Wenzhou 325006, PR China.
| | - Linna Du
- College of Advanced Materials Engineering, Jiaxing Nanhu University, Jiaxing 314001, PR China.
| | - Yurong Chen
- Institute of Eco-environmental Sciences, Wenzhou Academy of Agricultural Sciences, Wenzhou 325006, PR China
| | - Ting Wang
- Institute of Eco-environmental Sciences, Wenzhou Academy of Agricultural Sciences, Wenzhou 325006, PR China
| | - Xiaoxu Bo
- Institute of Eco-environmental Sciences, Wenzhou Academy of Agricultural Sciences, Wenzhou 325006, PR China
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Wang X, Riaz M, Babar S, Eldesouki Z, Liu B, Xia H, Li Y, Wang J, Xia X, Jiang C. Alterations in the composition and metabolite profiles of the saline-alkali soil microbial community through biochar application. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 352:120033. [PMID: 38218168 DOI: 10.1016/j.jenvman.2024.120033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Revised: 11/30/2023] [Accepted: 01/02/2024] [Indexed: 01/15/2024]
Abstract
Saline-alkali soil poses significant chanllenges to sustainable development of agriculture. Although biochar is commonly used as a soil organic amendment, its microbial remediation mechanism on saline-alkali soil requires further confirmation. To address this, we conducted a pot experiment using cotton seedlings to explore the potential remediation mechanism of rice straw biochar (BC) at three different levels on saline-alkaline soil. The results showed that adding of 2% biochar greatly improved the quality of saline-alkaline soil by reducing pH levels, electrical conductivity (EC), and water-soluble ions. Moreover, biochar increased the soil organic matter (SOM), nutrient availability and extracellular enzyme activity. Interestingly, it also reduced soil salinity and salt content in various cotton plant tissues. Additionally, biochar had a notable impact on the composition of the microbial community, causing changes in soil metabolic pathways. Notably, the addition of biochar promoted the growth and metabolism of dominant salt-tolerant bacteria, such as Proteobacteria, Bacteroidota, Acidobacteriota, and Actinobacteriota. By enhancing the positive correlation between microorganisms and metabolites, biochar alleviated the inhibitory effect of salt ions on microorganisms. In conclusion, the incorporation of biochar significantly improves the soil microenvironment, reduces soil salinity, and shows promise in ameliorating saline-alkaline soil conditions.
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Affiliation(s)
- Xiangling Wang
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China; The Key Laboratory of Oasis Ecoagriculture, Xinjiang Production and Construction Corps, Shihezi University, Shihezi, Xinjiang, 832000, PR China.
| | - Muhammad Riaz
- College of Resources and Environment, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, PR China.
| | - Saba Babar
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China.
| | - Zeinab Eldesouki
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China; Department of Soil Sciences, Faculty of Agriculture, Ain Shams University, Cairo, 11241, Egypt.
| | - Bo Liu
- Key Laboratory of Fertilization from Agricultural Wastes, Ministry of Agriculture and Rural Affairs, Institute of Plant Protection and Soil Fertilizer, Hubei Academy of Agricultural Sciences, Wuhan, Hubei, 430064, PR China.
| | - Hao Xia
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China.
| | - Yuxuan Li
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China.
| | - Jiyuan Wang
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China.
| | - Xiaoyang Xia
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China.
| | - Cuncang Jiang
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China; The Key Laboratory of Oasis Ecoagriculture, Xinjiang Production and Construction Corps, Shihezi University, Shihezi, Xinjiang, 832000, PR China.
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Kang J, Yang W, Liu S, Xuan N, Shao Y, Geng Y, Afzal M, Zhang Y, Yue S, Mushtaq R, Chen G. Arbuscular mycorrhizal fungi increased peanut ( Arachis hypogaea L.) yield by changing the rhizosphere microbial community structure in saline-alkali soil. Front Microbiol 2023; 14:1303979. [PMID: 38143871 PMCID: PMC10748501 DOI: 10.3389/fmicb.2023.1303979] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Accepted: 11/17/2023] [Indexed: 12/26/2023] Open
Abstract
Arbuscular mycorrhizal fungi (AMF) have demonstrated the potential to enhance the saline-alkali tolerance in plants. Nevertheless, the extent to which AMF can ameliorate the tolerance of salt-sensitive plants to alkaline conditions necessitates further investigation. The current study is primarily centered on elucidating the impact of AMF on the growth of the Huayu22 (H22) when cultivated in saline-alkaline soil. We leveraged DNA of rhizosphere microorganisms extracted from saline-alkali soil subjected to AMF treatment and conducted high-throughput sequencing encompassing 16S rRNA gene and ITS sequencing. Our findings from high-throughput sequencing unveiled Proteobacteria and Bacillus as the prevailing phylum and genus within the bacterial population, respectively. Likewise, the predominant fungal phylum and genus were identified as Ascomycota and Haematonectria. It is noteworthy that the relative abundance of Proteobacteria, Actinobacteria, Chloroflexi, Bacteroidetes, and Ascomycota exhibited significant increments subsequent to AMF inoculation. Our investigation into soil enzyme activity revealed a remarkable surge post-AMF inoculation. Notably, the amounts of pathogen growth inhibitory enzymes and organic carbon degrading enzymes rise, as predicted by the putative roles of microbial communities. In saline-alkali soil, inoculation of AMF did boost the yield of H22. Notable improvements were observed in the weight of both 100 fruits and 100 grains, which increased by 20.02% and 22.30%, respectively. Conclusively, this study not only provides a theoretical framework but also furnishes empirical evidence supporting the utilization of AMF as a viable strategy for augmenting the yield of salt-sensitive plants grown in alkaline conditions.
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Affiliation(s)
- Jia Kang
- Institute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Jinan, China
| | - Wenlong Yang
- Institute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Jinan, China
- State Key Laboratory of Nutrient Use and Management, Jinan, China
| | - Shangwu Liu
- Economic Crop Research Institute Heilongjiang Academy of Agricultural Sciences, Harbin, China
| | - Ning Xuan
- Institute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Jinan, China
- State Key Laboratory of Nutrient Use and Management, Jinan, China
| | - Yahui Shao
- Institute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Jinan, China
- State Key Laboratory of Nutrient Use and Management, Jinan, China
| | - Yun Geng
- Institute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Jinan, China
- State Key Laboratory of Nutrient Use and Management, Jinan, China
| | - Muhammad Afzal
- Institute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Jinan, China
| | - Yingxin Zhang
- Institute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Jinan, China
| | - Shousong Yue
- Institute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Jinan, China
| | - Rubina Mushtaq
- Institute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Jinan, China
- Institute of Molecular Biology and Biotechnology, The University of Lahore, Lahore, Pakistan
| | - Gao Chen
- Institute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Jinan, China
- State Key Laboratory of Nutrient Use and Management, Jinan, China
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Xia H, Riaz M, Babar S, Yan L, Li Y, Wang X, Wang J, Jiang C. " Assessing the impact of biochar on microbes in acidic soils: Alleviating the toxicity of aluminum and acidity". JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 345:118796. [PMID: 37579602 DOI: 10.1016/j.jenvman.2023.118796] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2022] [Revised: 07/28/2023] [Accepted: 08/09/2023] [Indexed: 08/16/2023]
Abstract
In arable soils, anthropogenic activities such as fertilizer applications have intensified soil acidification in recent years. This has resulted in frequent environmental problems such as aluminum (Al) and H+ stress, which negatively impact crop yields and quality in acidic soils. Biochar, as a promising soil conditioner, has attracted much attention globally. The present study was conducted in a greenhouse by setting up 2% biochar rate to investigate how biochar relieves Al3+ hazards in acidic soil by affecting soil quality, soil environment, and soil microbiomes. The addition of biochar significantly improved soil fertility and enzyme activities, which were attributed to its ability to enhance the utilization of soil carbon sources by influencing the activity of soil microorganisms. Moreover, the Al3+ contents were significantly decreased by 66.61-88.83% compared to the C0 level (without biochar treatment). In particular, the results of the 27Al NMR suggested that forms of AlVI (Al(OH)2+, Al(OH)+ 2, and Al3+) were increased by 88.69-100.44% on the surface of biochar, reducing the Al3+ stress on soil health. The combination of biochar and nitrogen (N) fertilizer contributed to the augmentation of bacterial diversity. The application of biochar and N fertilizer increased the relative abundance of the majority of bacterial species. Additionally, the application of biochar and N fertilizer had a significant impact on soil microbial metabolism, specifically in the biosynthesis of secondary metabolites (lipids and organic acids) and carbon metabolic ability. In conclusion, biochar can enhance soil microbial activity and improve the overall health of acidic soil by driving microbial metabolism. This study offers both theoretical and technical guidance for enhancing biochar in acidified soil and promoting sustainable development in farmland production.
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Affiliation(s)
- Hao Xia
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China
| | - Muhammad Riaz
- College of Resources and Environment, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, PR China
| | - Saba Babar
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China
| | - Lei Yan
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China
| | - Yuxuan Li
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China
| | - Xiangling Wang
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China; The Key Laboratory of Oasis Ecoagriculture, Xinjiang Production and Construction Corps, Shihezi University, Shihezi, Xinjiang, 832000, PR China
| | - Jiyuan Wang
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China
| | - Cuncang Jiang
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China; The Key Laboratory of Oasis Ecoagriculture, Xinjiang Production and Construction Corps, Shihezi University, Shihezi, Xinjiang, 832000, PR China.
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Luo F, Liu W, Mi W, Ma X, Liu K, Ju Z, Li W. Legume-grass mixtures increase forage yield by improving soil quality in different ecological regions of the Qinghai-Tibet Plateau. FRONTIERS IN PLANT SCIENCE 2023; 14:1280771. [PMID: 37929174 PMCID: PMC10620939 DOI: 10.3389/fpls.2023.1280771] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Accepted: 09/28/2023] [Indexed: 11/07/2023]
Abstract
Introduction Information on the relationship between soil quality and forage yield of legume-grass mixtures in different ecological regions can guide decision-making to achieve eco-friendly and sustainable pasture production. This study's objective was to assess the effects of different cropping systems on soil physical properties, nitrogen fractions, enzyme activities, and forage yield and determine suitable legume-grass mixtures for different ecoregions. Methods Oats (Avena sativa L.), forage peas (Pisum sativum L.), common vetch (Vicia sativa L.), and fava beans (Vicia faba L.) were grown in monocultures and mixtures (YS: oats and forage peas; YJ: oats and common vetch; YC: oats and fava beans) in three ecological regions (HZ: Huangshui Valley; GN: Sanjiangyuan District; MY: Qilian Mountains Basin) in a split-plot design. Results The results showed that the forage yield decreased with increasing altitude, with an order of GN (3203 m a.s.l.; YH 8.89 t·ha-1) < HZ (2661 m; YH 9.38 t·ha-1) < MY (2513m; YH 9.78 t·ha-1). Meanwhile, the forage yield was higher for mixed crops than for single crops in all ecological regions. In the 0-10 cm soil layer, the contents of total nitrogen (TN), microbial biomass nitrogen (MBN), soil organic matter (SOM), soluble organic nitrogen (SON), urease (UE), nitrate reductase (NR), sucrase (SC), and bacterial community alpha diversity, as well as relative abundance of dominant bacteria, were higher for mixed crops than for oats unicast. In addition, soil physical properties, nitrogen fractions, and enzyme activities varied in a wider range in the 0-10 cm soil layer than in the 10-20 cm layer, with larger values in the surface layer than in the subsurface layer. MBN, SON, UE, SC and catalase (CAT) were significantly and positively correlated with forage yield (P < 0.05). Ammonium nitrogen (ANN), nitrate nitrogen (NN), SOM and cropping systems (R) were significantly and positively correlated with Shannon and bacterial community (P < 0.05). The highest yields in the three ecological regions were 13.00 t·ha-1 for YS in MY, 10.59 t·ha-1 for YC in GN, and 10.63 t·ha-1 for YS in HZ. Discussion We recommend planting oats and forage peas in the Qilian Mountains Basin, oats and fava beans in the Sanjiangyuan District, and oats and forage peas in Huangshui valley. Our results provide new insights into eco-friendly, sustainable, and cost-effective forage production in the Qinghai Alpine Region in China.
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Affiliation(s)
| | - Wenhui Liu
- Key Laboratory of Superior Forage Germplasm in the Qinghai-Tibetan Plateau, Qinghai Academy of Animal Husbandry and Veterinary Sciences, Qinghai University, Xining, China
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Ren H, Zhang F, Zhu X, Lamlom SF, Zhao K, Zhang B, Wang J. Manipulating rhizosphere microorganisms to improve crop yield in saline-alkali soil: a study on soybean growth and development. Front Microbiol 2023; 14:1233351. [PMID: 37799597 PMCID: PMC10548211 DOI: 10.3389/fmicb.2023.1233351] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Accepted: 09/04/2023] [Indexed: 10/07/2023] Open
Abstract
Introduction Rhizosphere microorganisms can effectively promote the stress resistance of plants, and some beneficial rhizosphere microorganisms can significantly promote the growth of crops under salt stress, which has the potential to develop special microbial fertilizers for increasing the yield of saline-alkali land and provides a low-cost and environmentally friendly new strategy for improving the crop yield of saline-alkali cultivated land by using agricultural microbial technology. Methods In May 2022, a field study in a completely randomized block design was conducted at the Heilongjiang Academy of Agricultural Sciences to explore the correlation between plant rhizosphere microorganisms and soybean growth in saline-alkali soil. Two soybean cultivars (Hening 531, a salt-tolerant variety, and 20_1846, a salt-sensitive variety) were planted at two experimental sites [Daqing (normal condition) and Harbin (saline-alkali conditions)], aiming to investigate the performance of soybean in saline-alkali environments. Results Soybeans grown in saline-alkali soil showed substantial reductions in key traits: plant height (25%), pod number (26.6%), seed yield (33%), and 100 seed weight (13%). This underscores the unsuitability of this soil type for soybean cultivation. Additionally, microbial analysis revealed 43 depleted and 56 enriched operational taxonomic units (OTUs) in the saline-alkali soil compared to normal soil. Furthermore, an analysis of ion-associated microbes identified 85 mOTUs with significant correlations with various ions. A co-occurrence network analysis revealed strong relationships between specific mOTUs and ions, such as Proteobacteria with multiple ions. In addition, the study investigated the differences in rhizosphere species between salt-tolerant and salt-sensitive soybean varieties under saline-alkali soil conditions. Redundancy analysis (RDA) indicated that mOTUs in saline-alkali soil were associated with pH and ions, while mOTUs in normal soil were correlated with Ca2+ and K+. Comparative analyses identified significant differences in mOTUs between salt-tolerant and salt-sensitive varieties under both saline-alkali and normal soil conditions. Planctomycetes, Proteobacteria, and Actinobacteria were dominant in the bacterial community of saline-alkali soil, with significant enrichment compared to normal soil. The study explored the functioning of the soybean rhizosphere key microbiome by comparing metagenomic data to four databases related to the carbon, nitrogen, phosphorus, and sulfur cycles. A total of 141 KOs (KEGG orthologues) were identified, with 66 KOs related to the carbon cycle, 16 KOs related to the nitrogen cycle, 48 KOs associated with the phosphorus cycle, and 11 KOs linked to the sulfur cycle. Significant correlations were found between specific mOTUs, functional genes, and phenotypic traits, including per mu yield (PMY), grain weight, and effective pod number per plant. Conclusion Overall, this study provides comprehensive insights into the structure, function, and salt-related species of soil microorganisms in saline-alkali soil and their associations with salt tolerance and soybean phenotype. The identification of key microbial species and functional categories offers valuable information for understanding the mechanisms underlying plant-microbe interactions in challenging soil conditions.
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Affiliation(s)
- Honglei Ren
- Heilongjiang Academy of Agricultural Sciences, Soybean Research Institute, Harbin, China
| | - Fengyi Zhang
- Heilongjiang Academy of Agricultural Sciences, Soybean Research Institute, Harbin, China
| | - Xiao Zhu
- Heilongjiang Academy of Agricultural Sciences, Soybean Research Institute, Harbin, China
| | - Sobhi F. Lamlom
- Department of Plant Production, Faculty of Agriculture Saba Basha, Alexandria University, Alexandria, Egypt
| | - Kezhen Zhao
- Heilongjiang Academy of Agricultural Sciences, Soybean Research Institute, Harbin, China
| | - Bixian Zhang
- Heilongjiang Academy of Agricultural Sciences, Soybean Research Institute, Harbin, China
| | - Jiajun Wang
- Heilongjiang Academy of Agricultural Sciences, Soybean Research Institute, Harbin, China
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Jabborova D, Abdrakhmanov T, Jabbarov Z, Abdullaev S, Azimov A, Mohamed I, AlHarbi M, Abu-Elsaoud A, Elkelish A. Biochar improves the growth and physiological traits of alfalfa, amaranth and maize grown under salt stress. PeerJ 2023; 11:e15684. [PMID: 37609438 PMCID: PMC10441527 DOI: 10.7717/peerj.15684] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Accepted: 06/14/2023] [Indexed: 08/24/2023] Open
Abstract
Purpose Salinity is a main factor in decreasing seed germination, plant growth and yield. Salinity stress is a major problem for economic crops, as it can reduce crop yields and quality. Salinity stress occurs when the soil or water in which a crop is grown has a high salt content. Biochar improve plant growth and physiological traits under salt stress. The aim of the present study, the impact of biochar on growth, root morphological traits and physiological properties of alfalfa, amaranth and maize and soil enzyme activities under saline sands. Methods We studied the impact of biochar on plant growth and the physiological properties of alfalfa, amaranth and maize under salt stress conditions. After 40 days, plant growth parameters (plant height, shoot and root fresh weights), root morphological traits and physiological properties were measured. Soil nutrients such as the P, K and total N contents in soil and soil enzyme activities were analyzed. Results The results showed that the maize, alfalfa, and amaranth under biochar treatments significantly enhanced the plant height and root morphological traits over the control. The biochar on significantly increased the total root length, root diameter, and root volume. Compared to the control, the biochar significantly increased the chlorophyll a and b content, total chlorophyll and carotenoid content under salt stress. Furthermore, the biochar significantly increased enzyme activities of soil under salt stress in the three crops. Conclusions Biochar treatments promote plant growth and physiological traits of alfalfa, amaranth, and maize under the salt stress condition. Overall, biochar is an effective way to mitigate salinity stress in crops. It can help to reduce the amount of salt in the soil, improve the soil structure, and increase the availability of essential nutrients, which can all help to improve crop yields.
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Affiliation(s)
- Dilfuza Jabborova
- National University of Uzbekistan, Tashkent, Uzbekistan
- Uzbekistan Academy of Sciences, Kibray, Uzbekistan
| | | | | | | | | | | | - Maha AlHarbi
- Princess Nourah bint Abdulrahman University, Riyadh, Saudi Arabia
| | - Abdelghafar Abu-Elsaoud
- Suez Canal University, Ismailia, Egypt
- Imam Mohammad ibn Saud Islamic University, Riyadh, Saudia Arabia
| | - Amr Elkelish
- Suez Canal University, Ismailia, Egypt
- Imam Mohammad ibn Saud Islamic University, Riyadh, Saudia Arabia
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9
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Wyszkowska J, Borowik A, Zaborowska M, Kucharski J. The Usability of Sorbents in Restoring Enzymatic Activity in Soils Polluted with Petroleum-Derived Products. MATERIALS (BASEL, SWITZERLAND) 2023; 16:ma16103738. [PMID: 37241368 DOI: 10.3390/ma16103738] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Revised: 05/05/2023] [Accepted: 05/12/2023] [Indexed: 05/28/2023]
Abstract
Due to their ability to adsorb or absorb chemical pollutants, including organic compounds, sorbents are increasingly used in the reclamation of soils subjected to their pressure, which results from their high potential in eliminating xenobiotics. The precise optimization of the reclamation process is required, focused primarily on restoring the condition of the soil. This research are essential for seeking materials sufficiently potent to accelerate the remediation process and for expanding knowledge related to biochemical transformations that lead to the neutralization of these pollutants. The goal of this study was to determine and compare the sensitivity of soil enzymes to petroleum-derived products in soil sown with Zea mays, remediated using four sorbents. The study was conducted in a pot experiment, with loamy sand (LS) and sandy loam (SL) polluted with VERVA diesel oil (DO) and VERVA 98 petrol (P). Soil samples were collected from arable lands, and the effects of the tested pollutants were compared with those used as control uncontaminated soil samples in terms of Zea mays biomass and the activity of seven enzymes in the soil. The following sorbents were applied to mitigate DO and P effects on the test plants and enzymatic activity: molecular sieve (M), expanded clay (E), sepiolite (S), and Ikasorb (I). Both DO and P exerted a toxic effect on Zea mays, with DO more strongly disturbing its growth and development and the activities of soil enzymes than P. In sandy clay (SL), P was found to be a significant inhibitor of dehydrogenases (Deh), catalase (Cat), urease (Ure), alkaline phosphatase (Pal), and arylsulfatase (Aryl) activities, while DO stimulated the activity of all enzymes in this soil. The study results suggest that the sorbents tested, mainlya molecular sieve, may be useful in remediating DO-polluted soils, especially when alleviating the effects of these pollutants in soils of lower agronomic value.
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Affiliation(s)
- Jadwiga Wyszkowska
- Department of Soil Science and Microbiology, Faculty of Agriculture and Forestry, University of Warmia and Mazury in Olsztyn, Plac Łódzki 3, 10-727 Olsztyn, Poland
| | - Agata Borowik
- Department of Soil Science and Microbiology, Faculty of Agriculture and Forestry, University of Warmia and Mazury in Olsztyn, Plac Łódzki 3, 10-727 Olsztyn, Poland
| | - Magdalena Zaborowska
- Department of Soil Science and Microbiology, Faculty of Agriculture and Forestry, University of Warmia and Mazury in Olsztyn, Plac Łódzki 3, 10-727 Olsztyn, Poland
| | - Jan Kucharski
- Department of Soil Science and Microbiology, Faculty of Agriculture and Forestry, University of Warmia and Mazury in Olsztyn, Plac Łódzki 3, 10-727 Olsztyn, Poland
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10
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Sritongon N, Sarin P, Theerakulpisut P, Riddech N. The effect of salinity on soil chemical characteristics, enzyme activity and bacterial community composition in rice rhizospheres in Northeastern Thailand. Sci Rep 2022; 12:20360. [PMID: 36437295 PMCID: PMC9701763 DOI: 10.1038/s41598-022-24902-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Accepted: 11/22/2022] [Indexed: 11/28/2022] Open
Abstract
Saline soil is one of the major problems limiting rice productivity in the Northeastern area of Thailand. Thus, the aims of this study were to determine soil physicochemical analysis and soil enzyme activities, and bacterial communities in the rhizosphere of 'RD 6' rice grown in salt-affected rice fields. The Ban Thum sample showed the highest electrical conductivity (EC; greater than 6 dS m-1) and total Na, while the EC in other fields were at non- or slightly saline levels. The principal component analysis revealed that soil chemical characteristics and soil enzymes activities explained 73.4% of total variation. Soil enzyme activities including dehydrogenase and fluorescein diacetate (FDA) hydrolysis, and soil characteristics including organic matter (OM) and organic carbon (OC) were significantly negatively correlated to EC. This indicated that these soil properties were adversely impacted by salts. Interestingly, activities of all hydrolytic enzymes were not affected by soil salinity. Bacteria that were able to colonize the rhizosphere soils were Achromobacter cholinophagum, Rhizobium tarimense, and unculturable bacteria. In this regard, study on the relationship of soil chemical characteristics and soil enzyme activities together with bacterial communities provided promising data for assessing rice field soil quality in the future.
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Affiliation(s)
- Natthawat Sritongon
- grid.9786.00000 0004 0470 0856Department of Microbiology, Faculty of Science, Khon Kaen University, Khon Kaen, 40002 Thailand
| | - Pornrapee Sarin
- grid.9786.00000 0004 0470 0856Department of Microbiology, Faculty of Science, Khon Kaen University, Khon Kaen, 40002 Thailand
| | - Piyada Theerakulpisut
- grid.9786.00000 0004 0470 0856Department of Biology, Faculty of Science, Khon Kaen University, Khon Kaen, 40002 Thailand ,grid.9786.00000 0004 0470 0856Salt-Tolerant Rice Research Group, Faculty of Science, Khon Kaen University, Khon Kaen, 40002 Thailand
| | - Nuntavun Riddech
- grid.9786.00000 0004 0470 0856Department of Microbiology, Faculty of Science, Khon Kaen University, Khon Kaen, 40002 Thailand ,grid.9786.00000 0004 0470 0856Salt-Tolerant Rice Research Group, Faculty of Science, Khon Kaen University, Khon Kaen, 40002 Thailand
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11
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Tian S, Liu X, Jin B, Zhao X. Contribution of Fine Roots to Soil Organic Carbon Accumulation in Different Desert Communities in the Sangong River Basin. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:10936. [PMID: 36078644 PMCID: PMC9518483 DOI: 10.3390/ijerph191710936] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 08/20/2022] [Accepted: 08/28/2022] [Indexed: 06/15/2023]
Abstract
This study explored the relationship between soil organic carbon (SOC) and root distribution, with the aim of evaluating the carbon stocks and sequestration potential under five plant communities (Alhagi sparsifolia, Tamarix ramosissima, Reaumuria soongorica, Haloxylon ammodendron, and Phragmites communis) in an arid region, the Sangong River watershed desert ecosystem. Root biomass, ecological factors, and SOC in different layers of a 0-100 cm soil profile were investigated. The results demonstrated that almost all living fine root biomass (11.78-34.41 g/m2) and dead fine root biomass (5.64-15.45 g/m2) levels were highest in the 10-20 cm layer, except for the P. communis community, which showed the highest living and dead fine root biomass at a depth of 60-70 cm. Fine root biomass showed strong seasonal dynamics in the five communities from June to October. The biomass levels of the A. sparsifolia (138.31 g/m2) and H. ammodendron (229.73 g/m2) communities were highest in August, whereas those of the T. ramosissima (87.76 g/m2), R. soongorica (66.29 g/m2), and P. communis (148.31 g/m2) communities were highest in September. The SOC of the five communities displayed strong changes with increasing soil depth. The mean SOC value across all five communities was 77.36% at 0-30 cm. The highest SOC values of the A. sparsifolia (3.08 g/kg), T. ramosissima (2.35 g/kg), and R. soongorica (2.34 g/kg) communities were found in June, and the highest value of the H. ammodendron (2.25 and 2.31 g/kg, p > 0.05) community was found in June and September. The highest SOC values of the P. communis (1.88 g/kg) community were found in July. Fine root production and turnover rate were 50.67-486.92 g/m2/year and 1.25-1.98 times per year. The relationships among SOC, fine root biomass, and ecological factors (soil water content and soil bulk density) were significant for all five communities. Based on the results, higher soil water content and soil conductivity favored the decomposition of root litter and increased fine root turnover, thereby facilitating SOC formation. Higher pH and bulk density levels are not conducive to soil biological activity and SOC mineralization, leading to increased SOC levels in desert regions.
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Affiliation(s)
- Sihui Tian
- College of Animal Science, Guizhou University, Guiyang 550025, China
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Xin Liu
- College of Animal Science, Guizhou University, Guiyang 550025, China
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Baocheng Jin
- College of Animal Science, Guizhou University, Guiyang 550025, China
| | - Xuechun Zhao
- College of Animal Science, Guizhou University, Guiyang 550025, China
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12
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Chen Q, Cao X, Li Y, Sun Q, Dai L, Li J, Guo Z, Zhang L, Ci L. Functional carbon nanodots improve soil quality and tomato tolerance in saline-alkali soils. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 830:154817. [PMID: 35341861 DOI: 10.1016/j.scitotenv.2022.154817] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2022] [Revised: 03/13/2022] [Accepted: 03/21/2022] [Indexed: 06/14/2023]
Abstract
High salinity and alkalinity of saline-alkali soil lead to soil deterioration, the subsequent osmotic stress and ion toxicity inhibited crops growth and productivity. In this research, 8 mg kg-1 and 16 mg kg-1 functional carbon nanodots (FCNs) can alleviate the adverse effects of saline-alkali on tomato plant at both seedling and harvest stages, thanks to their up-regulation effects on soil properties and plant physiological processes. On one hand, FCNs stimulate the plant potential of tolerance to saline-alkali and disease resistance through triggering the defense response of antioxidant system, enhancing the osmotic adjustment, promoting the nutrient uptake, transportation and utilization, and up-regulating the photosynthesis, thereby improve tomato growth and productivity in saline-alkali soils. On the other hand, FCNs application contributes to the improvement of soil physicochemical properties and fertilities, as well as decline soil salinity and alkalinity, which are related to plant growth and fruit quality. This research also focuses on the dose-dependent effects of FCNs on their regulation effects and toxicity to tomato growth under stress or non-stress. These findings recommend that FCNs could be applied as potential amendments to ameliorate the saline-alkali soil and improve the tomato tolerance and productivity in the Yellow River Delta.
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Affiliation(s)
- Qiong Chen
- School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen 518055, PR China
| | - Xiufeng Cao
- School of Environmental Science and Engineering, Shandong University, Qingdao 266237, PR China.
| | - Yuanyuan Li
- School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen 518055, PR China
| | - Qing Sun
- Research Center for Carbon Nanomaterials, Key Laboratory for Liquid-Solid Structural Evolution & Processing of Materials (Ministry of Education), School of Materials Science and Engineering, Shandong University, Jinan 250061, PR China
| | - Linna Dai
- Research Center for Carbon Nanomaterials, Key Laboratory for Liquid-Solid Structural Evolution & Processing of Materials (Ministry of Education), School of Materials Science and Engineering, Shandong University, Jinan 250061, PR China
| | - Jianwei Li
- Research Center for Carbon Nanomaterials, Key Laboratory for Liquid-Solid Structural Evolution & Processing of Materials (Ministry of Education), School of Materials Science and Engineering, Shandong University, Jinan 250061, PR China
| | - Zhijiang Guo
- State Key Laboratory of Silicon Materials, School of Materials Science and Engineering, Zhejiang University, Hangzhou 310027, PR China
| | - Lin Zhang
- Research Center for Carbon Nanomaterials, Key Laboratory for Liquid-Solid Structural Evolution & Processing of Materials (Ministry of Education), School of Materials Science and Engineering, Shandong University, Jinan 250061, PR China
| | - Lijie Ci
- School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen 518055, PR China; Research Center for Carbon Nanomaterials, Key Laboratory for Liquid-Solid Structural Evolution & Processing of Materials (Ministry of Education), School of Materials Science and Engineering, Shandong University, Jinan 250061, PR China.
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13
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F. Ajilogba C, Babalola OO, Adebola P, Adeleke R. Bambara Groundnut Rhizobacteria Antimicrobial and Biofertilization Potential. FRONTIERS IN PLANT SCIENCE 2022; 13:854937. [PMID: 35909751 PMCID: PMC9326403 DOI: 10.3389/fpls.2022.854937] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/14/2022] [Accepted: 06/13/2022] [Indexed: 06/15/2023]
Abstract
Bambara groundnut, an underutilized crop has been proved to be an indigenous crop in Africa with the potential for food security. The rhizosphere of Bambara groundnut contains Rhizobacteria, with the ability to grow, adapt, and colonize their surroundings even in unfavorable conditions and have not been explored for their plant growth-promoting properties. The aim of this research was to determine the potential of rhizobacteria from Bambara groundnut soil samples as either biofertilizers or biocontrol agents or both to help provide sustainable agriculture in Africa and globally. Bambara groundnut rhizospheric soil samples were collected and analyzed for their chemical composition. Rhizobacteria isolates were cultured from the soil samples. Plant growth-promoting, antifungal activities and phylogenetic analysis using 16S rRNA were carried out on the isolates to identify the rhizobacteria. A 2-year field study planting was carried out to determine the effect of these rhizobacteria as biofertilizers for Bambara groundnut (Vigna subterranean). The study was carried out in a complete randomized block experimental design with three replications. All the isolates were able to produce ammonia and 1-aminocyclopropane-1-carboxylate, while 4.65, 12.28, and 27.91% produced hydrogen cyanide, indole acetic acid, and solubilized phosphate, respectively, making them important targets as biocontrol and biofertilizer agents. The field results revealed that treatment with rhizobacteria had significant results compared with the control. Characterization of selected isolates reveals their identity as B. amyloliquefaciens, B. thuringiensis, and Bacillus sp. These Bacillus isolates have proved to be plant growth-promoting agents that can be used as biofertilizers to enhance the growth of crops and consequent improved yield. This is the first time the rhizobacteria from the Bambara groundnut rhizosphere are applied as biofertilizer.
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Affiliation(s)
- Caroline F. Ajilogba
- Niche Area for Food Security and Safety, Faculty of Natural and Agricultural Science, North-West University, Mmabatho, South Africa
- Agricultural Research Council-Natural Resources and Engineering, Pretoria, South Africa
| | - Olubukola O. Babalola
- Niche Area for Food Security and Safety, Faculty of Natural and Agricultural Science, North-West University, Mmabatho, South Africa
| | - Patrick Adebola
- Agricultural Research Council-Vegetable and Ornamental Plants, Pretoria, South Africa
- International Institute of Tropical Agriculture, Abuja, Nigeria
| | - Rasheed Adeleke
- Unit for Environmental Sciences and Management, North-West University, Potchefstroom, South Africa
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14
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Hassan W, Li Y, Saba T, Wu J, Bashir S, Bashir S, Gatasheh MK, Diao ZH, Chen Z. Temperature responsiveness of soil carbon fractions, microbes, extracellular enzymes and CO 2 emission: mitigating role of texture. PeerJ 2022; 10:e13151. [PMID: 35539011 PMCID: PMC9080434 DOI: 10.7717/peerj.13151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Accepted: 03/01/2022] [Indexed: 01/12/2023] Open
Abstract
The interaction of warming and soil texture on responsiveness of the key soil processes i.e. organic carbon (C) fractions, soil microbes, extracellular enzymes and CO2 emissions remains largely unknown. Global warming raises the relevant question of how different soil processes will respond in near future, and what will be the likely regulatory role of texture? To bridge this gap, this work applied the laboratory incubation method to investigate the effects of temperature changes (10-50 °C) on dynamics of labile, recalcitrant and stable C fractions, soil microbes, microbial biomass, activities of extracellular enzymes and CO2 emissions in sandy and clayey textured soils. The role of texture (sandy and clayey) in the mitigation of temperature effect was also investigated. The results revealed that the temperature sensitivity of C fractions and extracellular enzymes was in the order recalcitrant C fractions > stable C fractions > labile C fractions and oxidative enzymes > hydrolytic enzymes. While temperature sensitivity of soil microbes and biomass was in the order bacteria > actinomycetes > fungi ≈ microbial biomass C (MBC) > microbial biomass N (MBN) > microbial biomass N (MBP). Conversely, the temperature effect and sensitivity of all key soil processes including CO2 emissions were significantly (P < 0.05) higher in sandy than clayey textured soil. Results confirmed that under the scenario of global warming and climate change, soils which are sandy in nature are more susceptible to temperature increase and prone to become the CO2-C sources. It was revealed that clayey texture played an important role in mitigating and easing off the undue temperature influence, hence, the sensitivity of key soil processes.
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Affiliation(s)
- Waseem Hassan
- Landwirtschaftlich-Gärtnerischen, Humboldt-Universität zu Berlin, Berlin, Germany,Institute of Environment and Sustainable Development in Agriculture/Laboratory for Agricultural Environment, Ministry of Agriculture and Rural Affairs, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Yu’e Li
- Institute of Environment and Sustainable Development in Agriculture/Laboratory for Agricultural Environment, Ministry of Agriculture and Rural Affairs, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Tahseen Saba
- College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Jianshuang Wu
- Institute of Environment and Sustainable Development in Agriculture/Laboratory for Agricultural Environment, Ministry of Agriculture and Rural Affairs, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Safdar Bashir
- Department of Soil and Environmental Sciences, Ghazi University, Dera Ghazi Khan, Dera Ghazi Khan, Pakistan
| | - Saqib Bashir
- Department of Soil and Environmental Sciences, Ghazi University, Dera Ghazi Khan, Dera Ghazi Khan, Pakistan
| | - Mansour K. Gatasheh
- Department of Biochemistry, College of Science, King Saud University, Riyadh, Saudi Arabia
| | - Zeng-Hui Diao
- School of Environmental Science and Engineering, Zhongkai University of Agriculture and Engineering, Guangzhou, China
| | - Zhongbing Chen
- Department of Applied Ecology, Faculty of Environmental Sciences, Czech University of Life Sciences, Praha-Suchdol, Prague, Czech Republic
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15
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Zhang C, Zhou X, Wang X, Ge J, Cai B. Elaeagnus angustifolia can improve salt-alkali soil and the health level of soil: Emphasizing the driving role of core microbial communities. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2022; 305:114401. [PMID: 34974219 DOI: 10.1016/j.jenvman.2021.114401] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Revised: 12/23/2021] [Accepted: 12/26/2021] [Indexed: 06/14/2023]
Abstract
Saline-alkali environments are widely distributed in China and significantly hinder the development of agriculture. This study characterizes the long-term effects of planting Elaeagnus angustifolia (E. angustifolia) on the physical and chemical properties, enzyme activities and microbial community characteristics of saline-alkali soil in the Songnen Plain (1, 2 and 3 years). The results showed that planting E. angustifolia reduced soil pH and electrical conductivity (EC) and increased soil total phosphorus (TP), total nitrogen (TN), nitrate nitrogen (Nni), total potassium (TK), dissolved organic C (DOC), dissolved organic matter (DOM) and available potassium (AK) content and catalase, urease, polyphenol oxidase, phosphatase, sucrase and cellulase enzyme activities, and the results peaked in the 3 year. High-throughput sequencing showed that the bacterial abundance and diversity were as follows (from high to low) y3 > y2 > y1 > CK. E. angustifolia resulted in an increase in the relative abundance of the dominant bacteria. Proteobacteria and Pseudomonas were the major phylum and genus, respectively. Redundancy analysis showed that changes in the soil microbial community significantly affect the physical and chemical properties of the soil, with Proteobacteria members being the key microorganisms that reduce soil salinity. Network analysis showed that Pseudomonas (Proteobacteria) participated in the synthesis of key soil enzymes. 16S rRNA sequencing predicted that the expression of genes related to carbon (rbcL, acsA, acsB, Pcc and accA) and nitrogen (amoA/B, nxrA, hao, gdh, ureC and nosZ) transformation increased, and Pseudomonas members were key regulators of carbon and nitrogen dynamics. In conclusion, the planting of E. angustifolia could improve the physical and chemical properties of the soil by releasing root exudates into the soil and increasing the diversity and richness of soil microbial communities to improve saline-alkali soil, providing a theoretical basis for improving saline-alkali soil and promoting the sustainable development of modern agriculture.
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Affiliation(s)
- Chi Zhang
- Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education, Heilongjiang University, Harbin, 150500, China; Key Laboratory of Microbiology, College of Heilongjiang Province, School of Life Sciences, Heilongjiang University, Harbin, 150080, China
| | - Xiaohang Zhou
- College of Basic Medicine, Mudanjiang Medical University, Mudanjiang, 157000, China
| | - Xiaoyu Wang
- Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education, Heilongjiang University, Harbin, 150500, China; Key Laboratory of Microbiology, College of Heilongjiang Province, School of Life Sciences, Heilongjiang University, Harbin, 150080, China
| | - Jingping Ge
- Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education, Heilongjiang University, Harbin, 150500, China; Key Laboratory of Microbiology, College of Heilongjiang Province, School of Life Sciences, Heilongjiang University, Harbin, 150080, China.
| | - Baiyan Cai
- Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education, Heilongjiang University, Harbin, 150500, China; Key Laboratory of Microbiology, College of Heilongjiang Province, School of Life Sciences, Heilongjiang University, Harbin, 150080, China.
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16
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Qu Y, Tang J, Liu B, Lyu H, Duan Y, Yang Y, Wang S, Li Z. Rhizosphere enzyme activities and microorganisms drive the transformation of organic and inorganic carbon in saline-alkali soil region. Sci Rep 2022; 12:1314. [PMID: 35079055 PMCID: PMC8789911 DOI: 10.1038/s41598-022-05218-7] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Accepted: 01/10/2022] [Indexed: 11/09/2022] Open
Abstract
Western Jilin Province is one of the world's three major saline-alkali land distribution areas, and is also an important area of global climate change and carbon cycle research. Rhizosphere soil microorganisms and enzymes are the most active components in soil, which are closely related to soil carbon cycle and can reflect soil organic carbon (SOC) dynamics sensitively. Soil inorganic carbon (SIC) is the main existing form of soil carbon pool in arid saline-alkali land, and its quantity distribution affects the pattern of soil carbon accumulation and storage. Previous studies mostly focus on SOC, and pay little attention to SIC. Illumina Miseq high-throughput sequencing technology was used to reveal the changes of community structure in three maize fields (M1, M2 and M3) and three rice fields (R1, R2 and R3), which were affected by different levels of salinization during soil development. It is a new research topic of soil carbon cycle in saline-alkali soil region to investigate the effects of soil microorganisms and soil enzymes on the transformation of SOC and SIC in the rhizosphere. The results showed that the root-soil-microorganism interaction was changed by saline-alkali stress. The activities of catalase, invertase, amylase and β-glucosidase decreased with increasing salinity. At the phylum level, most bacterial abundance decreases with increasing salinity. However, the relative abundance of Proteobacteria and Firmicutes in maize field and Firmicutes, Proteobacteria and Nitrospirae in rice field increased sharply under saline-alkali stress. The results of redundancy analysis showed that the differences of rhizosphere soil between the three maize and three rice fields were mainly affected by ESP, pH and soil salt content. In saline-alkali soil region, β-glucosidase activity and amylase were significantly positively correlated with SOC content in maize fields, while catalase and β-glucosidase were significantly positively correlated with SOC content in rice fields. Actinobacteria, Bacteroidetes and Verrucomicrobia had significant positive effects on SOC content of maize and rice fields. Proteobacteria, Gemmatimonadetes and Nitrospirae were positively correlated with SIC content. These enzymes and microorganisms are beneficial to soil carbon sequestration in saline-alkali soils.
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Affiliation(s)
- Yunke Qu
- Key Lab of Groundwater Resources and Environment, Ministry of Education, Jilin University, Changchun, 130012, China.,College of New Energy and Environment, Jilin University, Changchun, 130012, China
| | - Jie Tang
- College of New Energy and Environment, Jilin University, Changchun, 130012, China
| | - Ben Liu
- College of New Energy and Environment, Jilin University, Changchun, 130012, China
| | - Hang Lyu
- College of New Energy and Environment, Jilin University, Changchun, 130012, China
| | - Yucong Duan
- College of New Energy and Environment, Jilin University, Changchun, 130012, China
| | - Yao Yang
- College of New Energy and Environment, Jilin University, Changchun, 130012, China
| | - Sining Wang
- College of New Energy and Environment, Jilin University, Changchun, 130012, China
| | - Zhaoyang Li
- College of New Energy and Environment, Jilin University, Changchun, 130012, China.
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17
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Jiménez-Mejía R, Medina-Estrada RI, Carballar-Hernández S, Orozco-Mosqueda MDC, Santoyo G, Loeza-Lara PD. Teamwork to Survive in Hostile Soils: Use of Plant Growth-Promoting Bacteria to Ameliorate Soil Salinity Stress in Crops. Microorganisms 2022; 10:150. [PMID: 35056599 PMCID: PMC8781547 DOI: 10.3390/microorganisms10010150] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 01/06/2022] [Accepted: 01/07/2022] [Indexed: 11/30/2022] Open
Abstract
Plants and their microbiomes, including plant growth-promoting bacteria (PGPB), can work as a team to reduce the adverse effects of different types of stress, including drought, heat, cold, and heavy metals stresses, as well as salinity in soils. These abiotic stresses are reviewed here, with an emphasis on salinity and its negative consequences on crops, due to their wide presence in cultivable soils around the world. Likewise, the factors that stimulate the salinity of soils and their impact on microbial diversity and plant physiology were also analyzed. In addition, the saline soils that exist in Mexico were analyzed as a case study. We also made some proposals for a more extensive use of bacterial bioinoculants in agriculture, particularly in developing countries. Finally, PGPB are highly relevant and extremely helpful in counteracting the toxic effects of soil salinity and improving crop growth and production; therefore, their use should be intensively promoted.
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Affiliation(s)
- Rafael Jiménez-Mejía
- Licenciatura en Genómica Alimentaria, Universidad de La Ciénega del Estado de Michoacán de Ocampo (UCEMICH), Sahuayo 59103, Mexico; (R.J.-M.); (R.I.M.-E.); (S.C.-H.)
| | - Ricardo I. Medina-Estrada
- Licenciatura en Genómica Alimentaria, Universidad de La Ciénega del Estado de Michoacán de Ocampo (UCEMICH), Sahuayo 59103, Mexico; (R.J.-M.); (R.I.M.-E.); (S.C.-H.)
| | - Santos Carballar-Hernández
- Licenciatura en Genómica Alimentaria, Universidad de La Ciénega del Estado de Michoacán de Ocampo (UCEMICH), Sahuayo 59103, Mexico; (R.J.-M.); (R.I.M.-E.); (S.C.-H.)
| | - Ma. del Carmen Orozco-Mosqueda
- Facultad de Agrobiología “Presidente Juárez”, Universidad Michoacana de San Nicolás de Hidalgo (UMSNH), Uruapan 60170, Mexico;
| | - Gustavo Santoyo
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo (UMSNH), Morelia 58030, Mexico;
| | - Pedro D. Loeza-Lara
- Licenciatura en Genómica Alimentaria, Universidad de La Ciénega del Estado de Michoacán de Ocampo (UCEMICH), Sahuayo 59103, Mexico; (R.J.-M.); (R.I.M.-E.); (S.C.-H.)
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18
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Wang L, Kaur M, Zhang P, Li J, Xu M. Effect of Different Agricultural Farming Practices on Microbial Biomass and Enzyme Activities of Celery Growing Field Soil. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:ijerph182312862. [PMID: 34886587 PMCID: PMC8657710 DOI: 10.3390/ijerph182312862] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Revised: 12/02/2021] [Accepted: 12/02/2021] [Indexed: 12/01/2022]
Abstract
Soil quality is directly affected by alterations in its microbiological, biological, biochemical, physical, and chemical aspects. The microbiological activities of soil can affect soil fertility and plant growth because it can speed up the cycling of nutrients, enzymes, and hormones that are needed by plants for proper growth and development. The use of different agricultural management practices can influence microbial biomass and enzyme activities by altering soil microclimate, soil microorganism habitat, and nutrient cycling. Based on this, the present work planned to evaluate the impact of conventional, low-input, and organic farming systems in a vegetable field growing celery on microbial biomass and different soil enzyme activities. The present study showed a comparison of the effect of different practices on biological soil quality indicators during two sampling times, i.e., one month after colonization and one month before harvesting. It was observed that the soil microbial biomass in the organic farming system was significantly higher than that found in conventional and low-input practices. Under an organic farming system, the soil microbial biomass in December was significantly higher than that in October. The soil microbial biomass carbon in the 0–20 cm soil layer showed higher variation compared to that in the 20–40 cm layer for all the three of the farming management practices that were used in the study. Additionally, the soil total carbon and total organic carbon were recorded as being higher in the December samples than they were in the October samples. Under all the three of the management practices that were applied, the soil catalase activity was higher in the October samples than it was in the December soil samples that were collected the from 20–40 cm soil layer compared to those that were taken from the 0–20 cm layer. The application of organic fertilizer (chicken and cowmanure compost) resulted inincreases in the soil urease and in the protease activity. The protease activity of the soil samples that were extracted from the 0–20 cm and 20–40 cm soil layers in October was higher in the samples that were taken from farms using conventional practices than it was in the samples that were taken from farms using organic and low-input practices, while the samples that were collected during December from both of the soil layers showed higher protease activity when organic methods had been used. No significant variation in the soil urease activity was observed between the two soil layer samples. Urease activity was the highest when organic management practices were being used, followed by the low-input and the conventional modes. For the conventional and low-input practices, the soil urease activity showed an obvious trend of change that was related to thetime of sampling, i.e., activity in December was significantly higher than activity in October. The novelty of this study was to determine the microbial biomass carbon and enzymatic activity in a six-field crop rotation (tomato, cucumber, celery, fennel, cauliflower, and eggplant) using three management practices: low-input, conventional, and organic systems. The present study showed that the long-term application of organic fertilizers plays a large role in maintaining excellent microbial and enzyme activitythat result in improved soil quality.
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Affiliation(s)
- Lin Wang
- Henan Key Laboratory of Earth System Observation and Modeling, College of Geography and Environmental Science, Henan University, Kaifeng 475004, China; (L.W.); (M.K.); (P.Z.)
- Department of Environmental Sciences, Miami College, Henan University, Kaifeng 475004, China
| | - Mandeep Kaur
- Henan Key Laboratory of Earth System Observation and Modeling, College of Geography and Environmental Science, Henan University, Kaifeng 475004, China; (L.W.); (M.K.); (P.Z.)
| | - Ping Zhang
- Henan Key Laboratory of Earth System Observation and Modeling, College of Geography and Environmental Science, Henan University, Kaifeng 475004, China; (L.W.); (M.K.); (P.Z.)
| | - Ji Li
- College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193, China
- Correspondence: (J.L.); (M.X.)
| | - Ming Xu
- Henan Key Laboratory of Earth System Observation and Modeling, College of Geography and Environmental Science, Henan University, Kaifeng 475004, China; (L.W.); (M.K.); (P.Z.)
- Correspondence: (J.L.); (M.X.)
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19
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Sivojiene D, Kacergius A, Baksiene E, Maseviciene A, Zickiene L. The Influence of Organic Fertilizers on the Abundance of Soil Microorganism Communities, Agrochemical Indicators, and Yield in East Lithuanian Light Soils. PLANTS (BASEL, SWITZERLAND) 2021; 10:plants10122648. [PMID: 34961119 PMCID: PMC8703430 DOI: 10.3390/plants10122648] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Revised: 11/28/2021] [Accepted: 11/29/2021] [Indexed: 06/02/2023]
Abstract
Soil microorganisms are one of the main indicators used for assessing the stability of the soil ecosystem, the metabolism in the soil, and its fertility. The most important are the active soil microorganisms and the influence of the fertilizer applied to the soil on the abundance of these microorganisms. We aimed to investigate how the applied organic fertilizers affect the most active soil microorganisms, which determine the soil fertility and stability. Fungi, yeast-like fungi abundance, and abundance of three physiological groups of bacteria were analyzed: non-symbiotic diazotrophic, organotrophic, and mineral nitrogen assimilating. This study is valuable because relatively few similar studies have been performed on infertile Lithuanian soils. The first results of a long-term study were obtained. The results show the effect of fertilizers on trends in the changes of microorganism community diversity; however, more analysis is needed to assess the impact of organic fertilizers on the most active soil microorganisms. Therefore, the investigation was continued. The results of the 2020 quantitative analysis of culturable soil microorganisms show that the highest abundance of organotrophic and non-symbiotic diazotrophic bacteria were recorded during the summer season. Meanwhile, the abundance of bacteria assimilating mineral nitrogen and fungi was higher in autumn. Agrochemical parameters were determined at the beginning of the experiment. The highest concentration of Nmin in the soil was determined after fertilizing the plants with the combination of granulated poultry manure (N170) + biological substance Azotobacter spp. The yield of barley was calculated. It was found that the highest yield of spring barley in 2020 was obtained by fertilizing the experimental field with organic in combination with mineral fertilizers.
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Affiliation(s)
- Diana Sivojiene
- Lithuanian Research Centre for Agriculture and Forestry, Vokė Branch of Institute of Agriculture, Žalioji Sq. 2, LT-02232 Vilnius, Lithuania; (A.K.); (E.B.)
| | - Audrius Kacergius
- Lithuanian Research Centre for Agriculture and Forestry, Vokė Branch of Institute of Agriculture, Žalioji Sq. 2, LT-02232 Vilnius, Lithuania; (A.K.); (E.B.)
| | - Eugenija Baksiene
- Lithuanian Research Centre for Agriculture and Forestry, Vokė Branch of Institute of Agriculture, Žalioji Sq. 2, LT-02232 Vilnius, Lithuania; (A.K.); (E.B.)
| | - Aiste Maseviciene
- Agrochemical Research Laboratory of Institute of Agriculture, Lithuanian Research Centre for Agriculture and Forestry, Savanoriu Av. 287, LT-50127 Kaunas, Lithuania; (A.M.); (L.Z.)
| | - Lina Zickiene
- Agrochemical Research Laboratory of Institute of Agriculture, Lithuanian Research Centre for Agriculture and Forestry, Savanoriu Av. 287, LT-50127 Kaunas, Lithuania; (A.M.); (L.Z.)
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20
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Abstract
As the most important resource for life, water has been a central issue on the international agenda for several decades. Yet, the world’s supply of clean freshwater is steadily decreasing due to extensive agricultural demand for irrigated lands. Therefore, water resources should be used with greater efficiency, and the use of non-traditional water resources, such as Treated Wastewater (TW), should be increased. Reusing TW could be an alternative option to increase water resources. Thus, many countries have decided to turn wastewater into an irrigation resource to help meet urban demand and address water shortages. However, because of the nature of that water, there are potential problems associated with its use in irrigation. Some of the major concerns are health hazards, salinity build-up, and toxicity hazards. The objectives of this comprehensive literature review are to illuminate the importance of using TW in irrigation as an alternative freshwater source and to assess the effects of its use on soil fertility and other soil properties, plants, and public health. The literature review reveals that TW reuse has become part of the extension program for boosting water resource utilization. However, the uncontrolled application of such waters has many unfavorable effects on both soils and plants, especially in the long-term. To reduce these unfavorable effects when using TW in irrigation, proper guidelines for wastewater reuse and management should be followed to limit negative effects significantly.
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