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Nascimento ALF, de Medeiros AGJ, Neves ACO, de Macedo ABN, Rossato L, Assis Santos D, dos Santos ALS, Lima KMG, Bastos RW. Near-infrared spectroscopy and multivariate analysis as effective, fast, and cost-effective methods to discriminate Candida auris from Candida haemulonii. Front Chem 2024; 12:1412288. [PMID: 39050373 PMCID: PMC11266292 DOI: 10.3389/fchem.2024.1412288] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2024] [Accepted: 06/10/2024] [Indexed: 07/27/2024] Open
Abstract
Candida auris and Candida haemulonii are two emerging opportunistic pathogens that have caused an increase in clinical cases in the recent years worldwide. The differentiation of some Candida species is highly laborious, difficult, costly, and time-consuming depending on the similarity between the species. Thus, this study aimed to develop a new, faster, and less expensive methodology for differentiating between C. auris and C. haemulonii based on near-infrared (NIR) spectroscopy and multivariate analysis. C. auris CBS10913 and C. haemulonii CH02 were separated in 15 plates per species, and three isolated colonies of each plate were selected for Fourier transform near-infrared (FT-NIR) analysis, totaling 90 spectra. Subsequently, principal component analysis (PCA) and variable selection algorithms, including the successive projections algorithm (SPA) and genetic algorithm (GA) coupled with linear discriminant analysis (LDA), were employed to discern distinctive patterns among the samples. The use of PCA, SPA, and GA algorithms associated with LDA achieved 100% sensitivity and specificity for the discriminations. The SPA-LDA and GA-LDA algorithms were essential in selecting the variables (infrared wavelengths) of most importance for the models, which could be attributed to binding of cell wall structures such as polysaccharides, peptides, proteins, or molecules resulting from yeasts' metabolism. These results show the high potential of combined FT-NIR and multivariate analysis techniques for the classification of Candida-like fungi, which can contribute to faster and more effective diagnosis and treatment of patients affected by these microorganisms.
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Affiliation(s)
- Ayrton L. F. Nascimento
- Laboratório de Química Biológica e Quimiometria, Instituto de Química, Universidade Federal do Rio Grande do Norte, Natal, Brazil
| | - Anthony G. J. de Medeiros
- Laboratório de Uso Comum, Centro de Biociências, Universidade Federal do Rio Grande do Norte, Natal, Brazil
| | - Ana C. O. Neves
- Laboratório de Química Biológica e Quimiometria, Instituto de Química, Universidade Federal do Rio Grande do Norte, Natal, Brazil
| | - Ana B. N. de Macedo
- Laboratório de Uso Comum, Centro de Biociências, Universidade Federal do Rio Grande do Norte, Natal, Brazil
| | - Luana Rossato
- Laboratório de Pesquisa em Ciências da Saúde, Universidade Federal da Grande Dourados, Dourados, Brazil
| | - Daniel Assis Santos
- Laboratório de Micologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
- National Institute of Science and Technology in Human Pathogenic Fungi, Ribeirão Preto, Brazil
| | - André L. S. dos Santos
- Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Rio de Janeiro-RJ, Brazil
| | - Kássio M. G. Lima
- Laboratório de Química Biológica e Quimiometria, Instituto de Química, Universidade Federal do Rio Grande do Norte, Natal, Brazil
| | - Rafael W. Bastos
- Laboratório de Uso Comum, Centro de Biociências, Universidade Federal do Rio Grande do Norte, Natal, Brazil
- National Institute of Science and Technology in Human Pathogenic Fungi, Ribeirão Preto, Brazil
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Campos MI, Debán L, Pardo R. Near-Infrared Spectroscopy Procedure for Online Determination of Sodium and Potassium Content in Low-Salt Cured Hams. Foods 2023; 12:3998. [PMID: 37959117 PMCID: PMC10650758 DOI: 10.3390/foods12213998] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 10/26/2023] [Accepted: 10/30/2023] [Indexed: 11/15/2023] Open
Abstract
This paper reports the development of a near-infrared spectroscopy (NIRS) calibration procedure for the determination of sodium and potassium content in cured ham samples. Sliced samples of hams treated with different salts in different percentages were included in the study. Calibration models developed using partial least squares regression were cross-validated and predictive models were tested using the samples of cured ham with low sodium content. The results showed that the developed NIRS procedure is capable of directly measuring the potassium content of packaged dry-cured ham slices with low sodium content with a fitting accuracy of 91.44%, and that it can indirectly determine the sodium content by applying a correction factor to the values obtained for potassium. The prediction error between the calculated and actual sodium values determined using inductively coupled plasma atomic emission spectrophotometry (ICP-AES) was 0.004%, and this confirms that the NIRS procedure is a viable option for the determination of sodium and potassium content in this type of sample.
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Affiliation(s)
- María Isabel Campos
- CARTIF Technology Centre, Agrifood and Sustainable Processes Division, Parque Tecnológico de Boecillo, parcela 205, 47151 Valladolid, Spain
- Analytical Chemistry Department, Faculty of Sciences, University of Valladolid, Pº de Belén, 7, 47011 Valladolid, Spain; (L.D.); (R.P.)
| | - Luis Debán
- Analytical Chemistry Department, Faculty of Sciences, University of Valladolid, Pº de Belén, 7, 47011 Valladolid, Spain; (L.D.); (R.P.)
| | - Rafael Pardo
- Analytical Chemistry Department, Faculty of Sciences, University of Valladolid, Pº de Belén, 7, 47011 Valladolid, Spain; (L.D.); (R.P.)
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Campos MI, Debán L, Antolín G, Pardo R. A quantitative on-line analysis of salt in cured ham by near-infrared spectroscopy and chemometrics. Meat Sci 2023; 200:109167. [PMID: 36947977 DOI: 10.1016/j.meatsci.2023.109167] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2022] [Revised: 02/08/2023] [Accepted: 03/14/2023] [Indexed: 03/17/2023]
Abstract
In this work, non-invasive near-infrared spectroscopy (NIRS) combined with chemometrics was evaluated as a possible online analytical technique to categorize pieces of cured ham on the industrial production line based on their maximum sodium content. Stifle muscle was selected for the development of the NIRS prediction models because it is the one with the highest sodium content and the easiest in terms of accessibility for spectral measurement. In the study, samples with varying thicknesses were taken. The suitability of this method is demonstrated when a 5 mm sample is used for the construction of the model, obtaining the best fit with an R2cv of 92% and a prediction error of 0.11% sodium that coincides with the error of the reference method. In conclusion, a method is proposed for the direct determination of sodium content on the production line which allows the different pieces of ham to be quickly categorized according to their salt content.
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Affiliation(s)
- M Isabel Campos
- CARTIF Technology Center, Agrofood and Sustainable Processes Division, Parque Tecnológico de Boecillo, 205, 47151 Valladolid, Spain; Analytical Chemistry Department, Faculty of Sciences, University of Valladolid, P° de Belén, 7, 47011 Valladolid, Spain.
| | - Luis Debán
- Analytical Chemistry Department, Faculty of Sciences, University of Valladolid, P° de Belén, 7, 47011 Valladolid, Spain
| | - Gregorio Antolín
- CARTIF Technology Center, Agrofood and Sustainable Processes Division, Parque Tecnológico de Boecillo, 205, 47151 Valladolid, Spain; Chemical Engineering and Environmental Technology Department, E.I.I. (School of Industrial Engineering), University of Valladolid, P° del Cauce 59, 47011 Valladolid, Spain
| | - Rafael Pardo
- Analytical Chemistry Department, Faculty of Sciences, University of Valladolid, P° de Belén, 7, 47011 Valladolid, Spain
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Ruttanadech N, Phetpan K, Srisang N, Srisang S, Chungcharoen T, Limmun W, Youryon P, Kongtragoul P. Rapid and accurate classification of Aspergillus ochraceous contamination in Robusta green coffee bean through near-infrared spectral analysis using machine learning. Food Control 2023. [DOI: 10.1016/j.foodcont.2022.109446] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Ning H, Wang J, Jiang H, Chen Q. Quantitative detection of zearalenone in wheat grains based on near-infrared spectroscopy. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2022; 280:121545. [PMID: 35767904 DOI: 10.1016/j.saa.2022.121545] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Revised: 06/13/2022] [Accepted: 06/20/2022] [Indexed: 06/15/2023]
Abstract
Zearalenone (ZEN) can easily contaminate wheat, seriously affecting the quality and safety of wheat grains. In this study, a near-infrared (NIR) spectroscopy detection method for rapid detection of ZEN in wheat grains was proposed. First, the collected original near-infrared spectra were denoised, smoothed and scatter corrected by Savitzky-Golay smoothing (SG-smoothing) and multiple scattering correction (MSC), and then normalized. Three wavelength variable selection algorithms were used to select variables from the preprocessed NIR spectra, which were random frog (RF), successive projections algorithm (SPA), least absolute shrinkage and selection operator (LASSO). Finally, based on the feature variables extracted by the above algorithms, support vector machine (SVM) models were established respectively to realize the quantitative detection of the ZEN in wheat grains. Eventually, the prediction effect of the LASSO-SVM model was the best, the prediction correlation coefficient (RP) was 0.99, the root mean square error of prediction (RMSEP) was 2.1 μg·kg-1, and the residual prediction deviation (RPD) was 6.0. This research shows that the NIR spectroscopy can be used for high-precision quantitative detection of the ZEN in grains, and the research gives a new technical solution for the in-situ detection of mycotoxins in stored grains.
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Affiliation(s)
- Hongwei Ning
- School of Electrical and Information Engineering, Jiangsu University, Zhenjiang 212013, PR China
| | - Jiawei Wang
- School of Electrical and Information Engineering, Jiangsu University, Zhenjiang 212013, PR China
| | - Hui Jiang
- School of Electrical and Information Engineering, Jiangsu University, Zhenjiang 212013, PR China.
| | - Quansheng Chen
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, PR China.
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Research Progress of Applying Infrared Spectroscopy Technology for Detection of Toxic and Harmful Substances in Food. Foods 2022; 11:foods11070930. [PMID: 35407017 PMCID: PMC8997473 DOI: 10.3390/foods11070930] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2022] [Revised: 03/11/2022] [Accepted: 03/18/2022] [Indexed: 02/04/2023] Open
Abstract
In recent years, food safety incidents have been frequently reported. Food or raw materials themselves contain substances that may endanger human health and are called toxic and harmful substances in food, which can be divided into endogenous, exogenous toxic, and harmful substances and biological toxins. Therefore, realizing the rapid, efficient, and nondestructive testing of toxic and harmful substances in food is of great significance to ensure food safety and improve the ability of food safety supervision. Among the nondestructive detection methods, infrared spectroscopy technology has become a powerful solution for detecting toxic and harmful substances in food with its high efficiency, speed, easy operation, and low costs, while requiring less sample size and is nondestructive, and has been widely used in many fields. In this review, the concept and principle of IR spectroscopy in food are briefly introduced, including NIR and FTIR. Then, the main progress and contribution of IR spectroscopy are summarized, including the model’s establishment, technical application, and spectral optimization in grain, fruits, vegetables, and beverages. Moreover, the limitations and development prospects of detection are discussed. It is anticipated that infrared spectroscopy technology, in combination with other advanced technologies, will be widely used in the whole food safety field.
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