Using Genomic Selection to Develop Performance-Based Restoration Plant Materials

Effective native plant materials are critical to restoring the structure and function of extensively modified ecosystems, such as the sagebrush steppe of North America’s Intermountain West. The reestablishment of native bunchgrasses, e.g., bluebunch wheatgrass (Pseudoroegneria spicata [Pursh] À. Löve), is the first step for recovery from invasive species and frequent wildfire and towards greater ecosystem resiliency. Effective native plant material exhibits functional traits that confer ecological fitness, phenotypic plasticity that enables adaptation to the local environment, and genetic variation that facilitates rapid evolution to local conditions, i.e., local adaptation. Here we illustrate a multi-disciplinary approach based on genomic selection to develop plant materials that address environmental issues that constrain local populations in altered ecosystems. Based on DNA sequence, genomic selection allows rapid screening of large numbers of seedlings, even for traits expressed only in more mature plants. Plants are genotyped and phenotyped in a training population to develop a genome model for the desired phenotype. Populations with modified phenotypes can be used to identify plant syndromes and test basic hypotheses regarding relationships of traits to adaptation and to one another. The effectiveness of genomic selection in crop and livestock breeding suggests this approach has tremendous potential for improving restoration outcomes for species such as bluebunch wheatgrass.

Understory Vegetation Change Following Woodland Reduction Varies by Plant Community Type and Seeding Status: A Region-Wide Assessment of Ecological Benefits and Risks

Woodland encroachment is a global issue linked to diminished ecosystem services, prompting the need for restoration efforts. However, restoration outcomes can be highly variable, making it difficult to interpret the ecological benefits and risks associated with woodland-reduction treatments within semiarid ecosystems. We addressed this uncertainty by assessing the magnitude and direction of vegetation change over a 15-year period at 129 sagebrush (Artemisia spp.) sites following pinyon (Pinus spp.) and juniper (Juniperus spp.) (P-J) reduction. Pretreatment vegetation indicated strong negative relationships between P-J cover and the abundance of understory plants (i.e., perennial grass and sagebrush cover) in most situations and all three components differed significantly among planned treatment types. Thus, to avoid confounding pretreatment vegetation and treatment type, we quantified overall treatment effects and tested whether distinct response patterns would be present among three dominant plant community types that vary in edaphic properties and occur within distinct temperature/precipitation regimes using meta-analysis (effect size = lnRR = ln[posttreatment cover/pretreatment cover]). We also quantified how restoration seedings contributed to overall changes in key understory vegetation components. Meta-analyses indicated that while P-J reduction caused significant positive overall effects on all shrub and herbaceous components (including invasive cheatgrass [Bromus tectorum] and exotic annual forbs), responses were contingent on treatment- and plant community-type combinations. Restoration seedings also had strong positive effects on understory vegetation by augmenting changes in perennial grass and perennial forb components, which similarly varied by plant community type. Collectively, our results identified specific situations where broad-scale efforts to reverse woodland encroachment substantially met short-term management goals of restoring valuable ecosystem services and where P-J reduction disposed certain plant community types to ecological risks, such as increasing the probability of native species displacement and stimulating an annual grass-fire cycle. Resource managers should carefully weigh these benefits and risks and incorporate additional, appropriate treatments and/or conservation measures for the unique preconditions of a given plant community in order to minimize exotic species responses and/or enhance desirable outcomes.