1
|
Zhukovets AA, Chernyshov VV, Al’mukhametov AZ, Seregina TA, Revtovich SV, Kasatkina MA, Isakova YE, Kulikova VV, Morozova EA, Cherkasova AI, Mannanov TA, Anashkina AA, Solyev PN, Mitkevich VA, Ivanov RA. Novel Hydroxamic Acids Containing Aryl-Substituted 1,2,4- or 1,3,4-Oxadiazole Backbones and an Investigation of Their Antibiotic Potentiation Activity. Int J Mol Sci 2023; 25:96. [PMID: 38203266 PMCID: PMC10779255 DOI: 10.3390/ijms25010096] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2023] [Revised: 12/05/2023] [Accepted: 12/19/2023] [Indexed: 01/12/2024] Open
Abstract
UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase (LpxC) is a zinc amidase that catalyzes the second step of the biosynthesis of lipid A, which is an outer membrane essential structural component of Gram-negative bacteria. Inhibitors of this enzyme can be attributed to two main categories, non-hydroxamate and hydroxamate inhibitors, with the latter being the most effective given the chelation of Zn2+ in the active site. Compounds containing diacetylene or acetylene tails and the sulfonic head, as well as oxazoline derivatives of hydroxamic acids, are among the LpxC inhibitors with the most profound antibacterial activity. The present article describes the synthesis of novel functional derivatives of hydroxamic acids-bioisosteric to oxazoline inhibitors-containing 1,2,4- and 1,3,4-oxadiazole cores and studies of their cytotoxicity, antibacterial activity, and antibiotic potentiation. Some of the hydroxamic acids we obtained (9c, 9d, 23a, 23c, 30b, 36) showed significant potentiation in nalidixic acid, rifampicin, and kanamycin against the growth of laboratory-strain Escherichia coli MG1655. Two lead compounds (9c, 9d) significantly reduced Pseudomonas aeruginosa ATCC 27853 growth in the presence of nalidixic acid and rifampicin.
Collapse
Affiliation(s)
- Anastasia A. Zhukovets
- Translational Medicine Research Center, Sirius University of Science and Technology, Olympic Ave. 1, 354340 Sochi, Russia; (A.A.Z.); (A.Z.A.); (M.A.K.); (Y.E.I.); (A.I.C.); (T.A.M.); (R.A.I.)
| | - Vladimir V. Chernyshov
- Translational Medicine Research Center, Sirius University of Science and Technology, Olympic Ave. 1, 354340 Sochi, Russia; (A.A.Z.); (A.Z.A.); (M.A.K.); (Y.E.I.); (A.I.C.); (T.A.M.); (R.A.I.)
| | - Aidar Z. Al’mukhametov
- Translational Medicine Research Center, Sirius University of Science and Technology, Olympic Ave. 1, 354340 Sochi, Russia; (A.A.Z.); (A.Z.A.); (M.A.K.); (Y.E.I.); (A.I.C.); (T.A.M.); (R.A.I.)
| | - Tatiana A. Seregina
- Engelhardt Institute of Molecular Biology of the Russian Academy of Sciences, 32 Vavilov St., 119991 Moscow, Russia; (T.A.S.); (S.V.R.); (V.V.K.); (E.A.M.); (A.A.A.); (P.N.S.); (V.A.M.)
| | - Svetlana V. Revtovich
- Engelhardt Institute of Molecular Biology of the Russian Academy of Sciences, 32 Vavilov St., 119991 Moscow, Russia; (T.A.S.); (S.V.R.); (V.V.K.); (E.A.M.); (A.A.A.); (P.N.S.); (V.A.M.)
| | - Mariia A. Kasatkina
- Translational Medicine Research Center, Sirius University of Science and Technology, Olympic Ave. 1, 354340 Sochi, Russia; (A.A.Z.); (A.Z.A.); (M.A.K.); (Y.E.I.); (A.I.C.); (T.A.M.); (R.A.I.)
| | - Yulia E. Isakova
- Translational Medicine Research Center, Sirius University of Science and Technology, Olympic Ave. 1, 354340 Sochi, Russia; (A.A.Z.); (A.Z.A.); (M.A.K.); (Y.E.I.); (A.I.C.); (T.A.M.); (R.A.I.)
| | - Vitalia V. Kulikova
- Engelhardt Institute of Molecular Biology of the Russian Academy of Sciences, 32 Vavilov St., 119991 Moscow, Russia; (T.A.S.); (S.V.R.); (V.V.K.); (E.A.M.); (A.A.A.); (P.N.S.); (V.A.M.)
| | - Elena A. Morozova
- Engelhardt Institute of Molecular Biology of the Russian Academy of Sciences, 32 Vavilov St., 119991 Moscow, Russia; (T.A.S.); (S.V.R.); (V.V.K.); (E.A.M.); (A.A.A.); (P.N.S.); (V.A.M.)
| | - Anastasia I. Cherkasova
- Translational Medicine Research Center, Sirius University of Science and Technology, Olympic Ave. 1, 354340 Sochi, Russia; (A.A.Z.); (A.Z.A.); (M.A.K.); (Y.E.I.); (A.I.C.); (T.A.M.); (R.A.I.)
| | - Timur A. Mannanov
- Translational Medicine Research Center, Sirius University of Science and Technology, Olympic Ave. 1, 354340 Sochi, Russia; (A.A.Z.); (A.Z.A.); (M.A.K.); (Y.E.I.); (A.I.C.); (T.A.M.); (R.A.I.)
| | - Anastasia A. Anashkina
- Engelhardt Institute of Molecular Biology of the Russian Academy of Sciences, 32 Vavilov St., 119991 Moscow, Russia; (T.A.S.); (S.V.R.); (V.V.K.); (E.A.M.); (A.A.A.); (P.N.S.); (V.A.M.)
| | - Pavel N. Solyev
- Engelhardt Institute of Molecular Biology of the Russian Academy of Sciences, 32 Vavilov St., 119991 Moscow, Russia; (T.A.S.); (S.V.R.); (V.V.K.); (E.A.M.); (A.A.A.); (P.N.S.); (V.A.M.)
| | - Vladimir A. Mitkevich
- Engelhardt Institute of Molecular Biology of the Russian Academy of Sciences, 32 Vavilov St., 119991 Moscow, Russia; (T.A.S.); (S.V.R.); (V.V.K.); (E.A.M.); (A.A.A.); (P.N.S.); (V.A.M.)
| | - Roman A. Ivanov
- Translational Medicine Research Center, Sirius University of Science and Technology, Olympic Ave. 1, 354340 Sochi, Russia; (A.A.Z.); (A.Z.A.); (M.A.K.); (Y.E.I.); (A.I.C.); (T.A.M.); (R.A.I.)
| |
Collapse
|
2
|
Liao H, Huang Z, Zhu Q. A simple iodine-DMSO-promoted multicomponent reaction for the synthesis of 2,4-disubstituted dihydrotriazole-3-ones. Org Biomol Chem 2022; 20:3721-3725. [PMID: 35442256 DOI: 10.1039/d2ob00352j] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
A series of 2,4-disubstituted 1,2,4-triazole-3-ones 4 were prepared via an iodine-DMSO-promoted three-component reaction of formaldehyde, amines and hydrazines in moderate yields.
Collapse
Affiliation(s)
- Hui Liao
- Guangdong Provincial Key Laboratory of New Drug Screening, School of Pharmaceutical Sciences, Southern Medical University, 1838 Guangzhou Avenue North, Guangzhou 510515, China.
| | - Zesheng Huang
- Guangdong Provincial Key Laboratory of New Drug Screening, School of Pharmaceutical Sciences, Southern Medical University, 1838 Guangzhou Avenue North, Guangzhou 510515, China.
| | - Qiuhua Zhu
- Guangdong Provincial Key Laboratory of New Drug Screening, School of Pharmaceutical Sciences, Southern Medical University, 1838 Guangzhou Avenue North, Guangzhou 510515, China.
| |
Collapse
|
3
|
Kusaka S, Ohmura T, Suginome M. Iridium-Catalyzed Enantioselective Intramolecular Cross-Dehydrogenative Coupling of Alkyl Aryl Ethers Giving Enantioenriched 2,3-Dihydrobenzofurans. CHEM LETT 2022. [DOI: 10.1246/cl.220129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Satoshi Kusaka
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Toshimichi Ohmura
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Michinori Suginome
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| |
Collapse
|
4
|
Radhoff N, Studer A. Oxindole synthesis via polar-radical crossover of ketene-derived amide enolates in a formal [3 + 2] cycloaddition. Chem Sci 2022; 13:3875-3879. [PMID: 35432887 PMCID: PMC8966637 DOI: 10.1039/d1sc07134c] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Accepted: 03/08/2022] [Indexed: 12/27/2022] Open
Abstract
Herein we introduce a simple, efficient and transition-metal free method for the preparation of valuable and sterically hindered 3,3-disubstituted oxindoles via polar-radical crossover of ketene derived amide enolates. Various easily accessible N-alkyl and N-arylanilines are added to disubstituted ketenes and the resulting amide enolates undergo upon single electron transfer oxidation a homolytic aromatic substitution (HAS) to provide 3,3-disubstituted oxindoles in good to excellent yields. A variety of substituted anilines and a 3-amino pyridine engage in this oxidative formal [3 + 2] cycloaddition and cyclic ketenes provide spirooxindoles. Both substrates and reagents are readily available and tolerance to functional groups is broad.
Collapse
Affiliation(s)
- Niklas Radhoff
- Organisch-Chemisches Institut, Westfälische Wilhelms-Universität Corrensstraße 40 48149 Münster Germany
| | - Armido Studer
- Organisch-Chemisches Institut, Westfälische Wilhelms-Universität Corrensstraße 40 48149 Münster Germany
| |
Collapse
|
5
|
Ma Z, Zhou A, Xia C. Strategies for total synthesis of bispyrrolidinoindoline alkaloids. Nat Prod Rep 2022; 39:1015-1044. [PMID: 35297915 DOI: 10.1039/d1np00060h] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Covering up to 2021Complex cyclotryptamine alkaloids with a bispyrrolidino[2,3-b]indoline (BPI) skeleton are an intriguing family of natural products, exhibiting wide systematic occurrences, large structural diversity, and multiple biological activities. Based on their structural characteristics, BPI alkaloids can be classified into chimonanthine-type BPI alkaloids, BPI diketopiperazines, and BPI epipolythiodiketopiperazines. These intricate molecules have captivated great attention soon after their isolation and identification in the 1960s. Due to the structural complexity, the total synthesis of these cyclotryptamine alkaloids is challenging. Nevertheless, remarkable progress has been achieved in the last six decades; in particular, several methods have been successfully established for the construction of vicinal all-carbon quaternary stereocenters. In this review, the structural diversity and chemical synthesis of these BPI alkaloids were summarized. BPI alkaloids are mainly synthesized by the methods of oxidative dimerization, reductive dimerization, and alkylation of bisoxindole. The purpose of this review is to present overall strategies for assembling the BPI skeleton and efforts towards controlling the stereocenters.
Collapse
Affiliation(s)
- Zhixian Ma
- Key Laboratory of Medicinal Chemistry for Natural Resource, Ministry of Education, and Yunnan University Library, Yunnan University, Kunming 650091, China.
| | - Ankun Zhou
- Key Laboratory of Medicinal Chemistry for Natural Resource, Ministry of Education, and Yunnan University Library, Yunnan University, Kunming 650091, China.
| | - Chengfeng Xia
- Key Laboratory of Medicinal Chemistry for Natural Resource, Ministry of Education, and Yunnan University Library, Yunnan University, Kunming 650091, China.
| |
Collapse
|
6
|
Oxindole synthesis via C H activation methods. ADVANCES IN HETEROCYCLIC CHEMISTRY 2022. [DOI: 10.1016/bs.aihch.2022.10.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
|
7
|
Dobah F, Mazodze CM, Petersen WF. Cross-Dehydrogenative Cyclization-Dimerization Cascade Sequence for the Synthesis of Symmetrical 3,3'-Bisoxindoles. Org Lett 2021; 23:5466-5470. [PMID: 34232674 DOI: 10.1021/acs.orglett.1c01799] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The synthesis of symmetrical 3,3'-bisoxindoles from simple acyclic β-oxoanilides is reported. The described method forges three new C-C bonds in a single step via a sequential Mn(OAc)3·2H2O mediated oxidative radical cyclization-fragmentation-dimerization process. The scope of this reaction is demonstrated in the preparation of a variety of 3,3'-bisoxindoles, as well as its application toward the formal synthesis of the Calycanthaceae alkaloid, (±)-folicanthine.
Collapse
Affiliation(s)
- Farhaan Dobah
- Department of Chemistry, University of Cape Town, Rondebosch, Cape Town, 7700, South Africa
| | - C Munashe Mazodze
- Department of Chemistry, University of Cape Town, Rondebosch, Cape Town, 7700, South Africa
| | - Wade F Petersen
- Department of Chemistry, University of Cape Town, Rondebosch, Cape Town, 7700, South Africa
| |
Collapse
|
8
|
Su L, Sun H, Liu J, Wang C. Construction of Quaternary Carbon Center via NHC Catalysis Initiated by an Intermolecular Heck-Type Alkyl Radical Addition. Org Lett 2021; 23:4662-4666. [PMID: 34080869 DOI: 10.1021/acs.orglett.1c01400] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
A quaternary carbon center containing an oxindole motif is constructed via NHC-catalyzed transition-metal and aldehyde-free intermolecular Heck-type alkyl radical addition initiated annulation. This redox-neutral protocol also features a simple procedure, broad substrate scope, good functional group tolerance and could be smoothly amplified to a gram scale. The mechanism study shows that the reaction possibly undergoes two folds of SET processes with an NHC radical cation intermediate involved.
Collapse
Affiliation(s)
- Lanjun Su
- School of Pharmaceutical Sciences, South-Central University for Nationalities, Wuhan 430074, China
| | - Huan Sun
- School of Pharmaceutical Sciences, South-Central University for Nationalities, Wuhan 430074, China
| | - Jikai Liu
- School of Pharmaceutical Sciences, South-Central University for Nationalities, Wuhan 430074, China
| | - Chengming Wang
- Department of Chemistry, College of Chemistry and Materials Science, Jinan University, Guangzhou 511443, China
| |
Collapse
|
9
|
Zhao J, Song X, Li D, Zhao J, Qu J, Zhou Y. Intramolecular Dehydrogenative Coupling Approach to 2‐Oxindoles Using Fe(OAc)
2
/NaI/Na
2
S
2
O
8. European J Org Chem 2020. [DOI: 10.1002/ejoc.202001111] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Junyan Zhao
- State Key Laboratory of Fine Chemicals Department of Pharmaceutical Sciences School of Chemical Engineering Dalian University of Technology 116024 Dalian P.R. China
| | - Xun Song
- State Key Laboratory of Fine Chemicals Department of Pharmaceutical Sciences School of Chemical Engineering Dalian University of Technology 116024 Dalian P.R. China
| | - Dong Li
- State Key Laboratory of Fine Chemicals Department of Pharmaceutical Sciences School of Chemical Engineering Dalian University of Technology 116024 Dalian P.R. China
| | - Jinfeng Zhao
- State Key Laboratory of Fine Chemicals School of Chemical Engineering Dalian University of Technology 116024 Dalian P.R. China
| | - Jingping Qu
- State Key Laboratory of Fine Chemicals School of Chemical Engineering Dalian University of Technology 116024 Dalian P.R. China
| | - Yuhan Zhou
- State Key Laboratory of Fine Chemicals Department of Pharmaceutical Sciences School of Chemical Engineering Dalian University of Technology 116024 Dalian P.R. China
| |
Collapse
|
10
|
Moreno-Cabrerizo C, Ortega-Martínez A, Esteruelas MA, López AM, Nájera C, Sansano JM. Deacylative Alkylation vs. Photoredox Catalysis in the Synthesis of 3,3'-Bioxindoles. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000375] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Cristina Moreno-Cabrerizo
- Department of Organic Chemistry; and Instituto de Síntesis Orgánica (ISO); University of Alicante; PO Box 99 03080 Alicante Spain
- Centro de Innovación en Química Avanzada; ORFEO-CINQA; Spain
| | - Aitor Ortega-Martínez
- Department of Organic Chemistry; and Instituto de Síntesis Orgánica (ISO); University of Alicante; PO Box 99 03080 Alicante Spain
- Centro de Innovación en Química Avanzada; ORFEO-CINQA; Spain
| | - Miguel A. Esteruelas
- Centro de Innovación en Química Avanzada; ORFEO-CINQA; Spain
- Departamento de Química Inorgánica; Instituto de Síntesis Química y Catálisis Homogénea; Universidad de Zaragoza-CSIC; 50009 Zaragoza Spain
| | - Ana M. López
- Centro de Innovación en Química Avanzada; ORFEO-CINQA; Spain
- Departamento de Química Inorgánica; Instituto de Síntesis Química y Catálisis Homogénea; Universidad de Zaragoza-CSIC; 50009 Zaragoza Spain
| | - Carmen Nájera
- Centro de Innovación en Química Avanzada; ORFEO-CINQA; Spain
| | - José M. Sansano
- Department of Organic Chemistry; and Instituto de Síntesis Orgánica (ISO); University of Alicante; PO Box 99 03080 Alicante Spain
- Centro de Innovación en Química Avanzada; ORFEO-CINQA; Spain
| |
Collapse
|
11
|
Bayindir S, Lafzi F. A simple oxindole-based colorimetric HSO4¯ sensor: Naked-eye detection and spectroscopic analysis. J Photochem Photobiol A Chem 2019. [DOI: 10.1016/j.jphotochem.2019.03.011] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
|
12
|
Sumiyoshi T, Yamai YS, Tanaka A, Yajima T, Ishida K, Natsutani I, Uesato S, Nagaoka Y. Synthesis of Substituted t-Butyl 3-Alkyloxindole-3-carboxylates from Di-t-butyl (2-Nitrophenyl)malonates. HETEROCYCLES 2018. [DOI: 10.3987/com-17-s(t)2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
|
13
|
Roy A, Das MK, Chaudhuri S, Bisai A. Transition-Metal Free Oxidative Alkynylation of 2-Oxindoles with Ethynylbenziodoxolone (EBX) Reagents. J Org Chem 2017; 83:403-421. [DOI: 10.1021/acs.joc.7b02797] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Avishek Roy
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Bhopal Bypass
Road, Bhopal, MP 462 066, India
| | - Mrinal Kanti Das
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Bhopal Bypass
Road, Bhopal, MP 462 066, India
| | - Saikat Chaudhuri
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Bhopal Bypass
Road, Bhopal, MP 462 066, India
| | - Alakesh Bisai
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Bhopal Bypass
Road, Bhopal, MP 462 066, India
| |
Collapse
|
14
|
Donald JR, Taylor RJK, Petersen WF. Low-Temperature, Transition-Metal-Free Cross-Dehydrogenative Coupling Protocol for the Synthesis of 3,3-Disubstituted Oxindoles. J Org Chem 2017; 82:11288-11294. [PMID: 28926705 DOI: 10.1021/acs.joc.7b02085] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
A new low-temperature procedure for the synthesis of 3,3-disubstituted 2-oxindoles via cross-dehydrogenative coupling (CDC) is reported. The use of a strong, nonreversible base in these reactions has been found to effect a dramatic drop in reaction temperature (to room temperature) relative to the current state-of-the-art (>100 °C) procedure. When employing iodine as an "oxidant", new evidence suggests that this transformation may occur via a transiently stable iodinated intermediate rather than by direct single-electron oxidation.
Collapse
Affiliation(s)
- James R Donald
- Department of Chemistry, University of York , Heslington, York YO10 5DD, U.K
| | - Richard J K Taylor
- Department of Chemistry, University of York , Heslington, York YO10 5DD, U.K
| | - Wade F Petersen
- Department of Chemistry, University of York , Heslington, York YO10 5DD, U.K
| |
Collapse
|
15
|
Sarpong R. C-H Functionalization/activation in organic synthesis. Beilstein J Org Chem 2017; 12:2315-2316. [PMID: 28144298 PMCID: PMC5238585 DOI: 10.3762/bjoc.12.224] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2016] [Accepted: 09/29/2016] [Indexed: 12/20/2022] Open
Affiliation(s)
- Richmond Sarpong
- Department of Chemistry, University of California, Berkeley, 841A Latimer Hall, Berkeley, CA 94720, USA
| |
Collapse
|