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Devadiga D, Ahipa TN, Bhat SV, Kumar S. New Luminescent Pyridine-based Disc type Molecules: Synthesis, Photophysical, Electrochemical, and DFT studies. J Fluoresc 2023; 33:445-452. [PMID: 36435904 DOI: 10.1007/s10895-022-03090-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2022] [Accepted: 11/15/2022] [Indexed: 11/28/2022]
Abstract
The design and synthesis of new conjugated luminescent molecules have attracted the attention of researchers because of their various applications, especially in the field of optoelectronic devices. Most of the applications were mainly based on the intramolecular charge transfer (ICT). For this purpose, we designed and synthesized a series of new donor-acceptor based disc type molecules i.e. 2,4,6-tris(4-(alkyloxy)phenyl)pyridines carrying variable alkoxy chains [i.e. n = 2, 4, 6, 8, 10, 12, 14, 16]. Further, the structures of all the synthesized compounds were confirmed by using ATR-IR, 1H-NMR, 13C-NMR, and ESI-MS analysis. Moreover, the photophysical property study indicated that all the molecules are blue light emitting materials, however the change of alkoxy chain length in phenyl arms does not affect their absorption, emission, and energy levels. Besides, the thermal study revealed that core is stable up to 350 °C. Also, the DFT study showed that the photo induced electron transfer caused by HOMO-LUMO excitation in the studied molecules. Therefore, all the molecules have potential applications in optoelectronic applications.
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Affiliation(s)
- Deepak Devadiga
- Centre for Nano and Material Sciences, Jain University, Jain Global Campus, Bangalore, 562112, India
| | - T N Ahipa
- Centre for Nano and Material Sciences, Jain University, Jain Global Campus, Bangalore, 562112, India.
| | - S Vanishree Bhat
- Raman Research Institute, Soft Condensed Matter Group, C. V. Raman Avenue, Bangalore, 560080, India
| | - Sandeep Kumar
- Raman Research Institute, Soft Condensed Matter Group, C. V. Raman Avenue, Bangalore, 560080, India.,Department of Chemistry, Nitte Meenakshi Institute of Technology, Yelahanka, Bangalore, 560064, India
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Laghaei R, Meriney SD. Microphysiological Modeling of the Structure and Function of Neuromuscular Transmitter Release Sites. Front Synaptic Neurosci 2022; 14:917285. [PMID: 35769072 PMCID: PMC9236679 DOI: 10.3389/fnsyn.2022.917285] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2022] [Accepted: 05/12/2022] [Indexed: 11/13/2022] Open
Abstract
The general mechanism of calcium-triggered chemical transmitter release from neuronal synapses has been intensely studied, is well-known, and highly conserved between species and synapses across the nervous system. However, the structural and functional details within each transmitter release site (or active zone) are difficult to study in living tissue using current experimental approaches owing to the small spatial compartment within the synapse where exocytosis occurs with a very rapid time course. Therefore, computer simulations offer the opportunity to explore these microphysiological environments of the synapse at nanometer spatial scales and on a sub-microsecond timescale. Because biological reactions and physiological processes at synapses occur under conditions where stochastic behavior is dominant, simulation approaches must be driven by such stochastic processes. MCell provides a powerful simulation approach that employs particle-based stochastic simulation tools to study presynaptic processes in realistic and complex (3D) geometries using optimized Monte Carlo algorithms to track finite numbers of molecules as they diffuse and interact in a complex cellular space with other molecules in solution and on surfaces (representing membranes, channels and binding sites). In this review we discuss MCell-based spatially realistic models of the mammalian and frog neuromuscular active zones that were developed to study presynaptic mechanisms that control transmitter release. In particular, these models focus on the role of presynaptic voltage-gated calcium channels, calcium sensors that control the probability of synaptic vesicle fusion, and the effects of action potential waveform shape on presynaptic calcium entry. With the development of these models, they can now be used in the future to predict disease-induced changes to the active zone, and the effects of candidate therapeutic approaches.
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Affiliation(s)
- Rozita Laghaei
- Biomedical Applications Group, Pittsburgh Supercomputing Center, Carnegie Mellon University, Pittsburgh, PA, United States
| | - Stephen D. Meriney
- Department of Neuroscience, Center for Neuroscience, University of Pittsburgh, Pittsburgh, PA, United States
- *Correspondence: Stephen D. Meriney
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Zhilyakov N, Arkhipov A, Malomouzh A, Samigullin D. Activation of Neuronal Nicotinic Receptors Inhibits Acetylcholine Release in the Neuromuscular Junction by Increasing Ca 2+ Flux through Ca v1 Channels. Int J Mol Sci 2021; 22:9031. [PMID: 34445737 PMCID: PMC8396429 DOI: 10.3390/ijms22169031] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Revised: 08/18/2021] [Accepted: 08/19/2021] [Indexed: 11/16/2022] Open
Abstract
Cholinergic neurotransmission is a key signal pathway in the peripheral nervous system and in several branches of the central nervous system. Despite the fact that it has been studied extensively for a long period of time, some aspects of its regulation still have not yet been established. One is the relationship between the nicotine-induced autoregulation of acetylcholine (ACh) release with changes in the concentration of presynaptic calcium levels. The mouse neuromuscular junction of m. Levator Auris Longus was chosen as the model of the cholinergic synapse. ACh release was assessed by electrophysiological methods. Changes in calcium transients were recorded using a calcium-sensitive dye. Nicotine hydrogen tartrate salt application (10 μM) decreased the amount of evoked ACh release, while the calcium transient increased in the motor nerve terminal. Both of these effects of nicotine were abolished by the neuronal ACh receptor antagonist dihydro-beta-erythroidine and Cav1 blockers, verapamil, and nitrendipine. These data allow us to suggest that neuronal nicotinic ACh receptor activation decreases the number of ACh quanta released by boosting calcium influx through Cav1 channels.
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Affiliation(s)
- Nikita Zhilyakov
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center, Russian Academy of Sciences, P.O. Box 261, 420111 Kazan, Russia; (A.A.); (A.M.)
| | - Arsenii Arkhipov
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center, Russian Academy of Sciences, P.O. Box 261, 420111 Kazan, Russia; (A.A.); (A.M.)
| | - Artem Malomouzh
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center, Russian Academy of Sciences, P.O. Box 261, 420111 Kazan, Russia; (A.A.); (A.M.)
| | - Dmitry Samigullin
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center, Russian Academy of Sciences, P.O. Box 261, 420111 Kazan, Russia; (A.A.); (A.M.)
- Department of Radiophotonics and Microwave Technologies, Federal State Budgetary Educational Institution of Higher Education “Kazan National Research Technical University Named after A.N. Tupolev–KAI”, 420111 Kazan, Russia
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Li ES, Saha MS. Optimizing Calcium Detection Methods in Animal Systems: A Sandbox for Synthetic Biology. Biomolecules 2021; 11:343. [PMID: 33668387 PMCID: PMC7996158 DOI: 10.3390/biom11030343] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Revised: 02/19/2021] [Accepted: 02/21/2021] [Indexed: 12/16/2022] Open
Abstract
Since the 1970s, the emergence and expansion of novel methods for calcium ion (Ca2+) detection have found diverse applications in vitro and in vivo across a series of model animal systems. Matched with advances in fluorescence imaging techniques, the improvements in the functional range and stability of various calcium indicators have significantly enhanced more accurate study of intracellular Ca2+ dynamics and its effects on cell signaling, growth, differentiation, and regulation. Nonetheless, the current limitations broadly presented by organic calcium dyes, genetically encoded calcium indicators, and calcium-responsive nanoparticles suggest a potential path toward more rapid optimization by taking advantage of a synthetic biology approach. This engineering-oriented discipline applies principles of modularity and standardization to redesign and interrogate endogenous biological systems. This review will elucidate how novel synthetic biology technologies constructed for eukaryotic systems can offer a promising toolkit for interfacing with calcium signaling and overcoming barriers in order to accelerate the process of Ca2+ detection optimization.
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Affiliation(s)
| | - Margaret S. Saha
- Department of Biology, College of William and Mary, Williamsburg, VA 23185, USA;
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Samigullin DV, Zhilyakov NV, Khaziev EF, Bukharaeva EA, Nikolsky EE. Calcium Transient and Quantal Release in Mouse Neuromuscular Junction Under Extracellular Calcium Concentration Change. BIONANOSCIENCE 2018. [DOI: 10.1007/s12668-018-0558-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Khaziev EF, Samigullin DV, Tsentsevitsky AN, Bukharaeva EA, Nikolsky EE. ATP Reduces the Entry of Calcium Ions into the Nerve Ending by Blocking L-type Calcium Channels. Acta Naturae 2018; 10:93-96. [PMID: 30116620 PMCID: PMC6087822] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/04/2022] Open
Abstract
At neuromuscular junctions, ATP inhibits both the evoked and spontaneous acetylcholine release and inward calcium current operating via presynaptic P2Y receptors. It was shown in the experiments with the frog neuromuscular synapse using specific calcium-sensitive dye Oregon Green Bapta 1 that exogenous ATP reduces the amplitude of calcium transient, which reflects the changes in the entry of calcium ions in response to the nerve pulse. The depressing effect of ATP on the transient was prevented by suramin, the blocker of P2 receptors. Nitrendipine, a specific blocker of L-type calcium channels, per se decreased the calcium transient amplitude and significantly attenuated the effect of ATP on the calcium signal. Contrariwise, the preliminary application of ATP to the neuromuscular junction completely eliminated the depressing effect of nitrendipine on the calcium response. The obtained data suggest that an essential component in the inhibitory action of ATP on the calcium transient amplitude is provided by reduction of the entry of calcium ions into a frog nerve ending via L-type voltage-gated calcium channels.
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Affiliation(s)
- E. F. Khaziev
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, P.O. Box 30, Kazan, 420111, Russia ,Institute of Fundamental Biology and Medicine, Kazan Federal University, Open Lab “Neuropharmacology”, Kremlevskaya Str. 18, Kazan 420008, Russia ,National Research Technical University named after A.N. Tupolev, K. Marx Str. 31/7, Kazan 420111 , Russia
| | - D. V. Samigullin
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, P.O. Box 30, Kazan, 420111, Russia ,Institute of Fundamental Biology and Medicine, Kazan Federal University, Open Lab “Neuropharmacology”, Kremlevskaya Str. 18, Kazan 420008, Russia ,National Research Technical University named after A.N. Tupolev, K. Marx Str. 31/7, Kazan 420111 , Russia
| | - A. N. Tsentsevitsky
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, P.O. Box 30, Kazan, 420111, Russia ,Institute of Fundamental Biology and Medicine, Kazan Federal University, Open Lab “Neuropharmacology”, Kremlevskaya Str. 18, Kazan 420008, Russia
| | - E. A. Bukharaeva
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, P.O. Box 30, Kazan, 420111, Russia ,Institute of Fundamental Biology and Medicine, Kazan Federal University, Open Lab “Neuropharmacology”, Kremlevskaya Str. 18, Kazan 420008, Russia
| | - E. E. Nikolsky
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, P.O. Box 30, Kazan, 420111, Russia ,Institute of Fundamental Biology and Medicine, Kazan Federal University, Open Lab “Neuropharmacology”, Kremlevskaya Str. 18, Kazan 420008, Russia
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