1
|
Chan Ho Tong L, Jourdier E, Naquin D, Ben Chaabane F, Aouam T, Chartier G, Castro González I, Margeot A, Bidard F. Transgressive phenotypes from outbreeding between the Trichoderma reesei hyper producer RutC30 and a natural isolate. Microbiol Spectr 2024; 12:e0044124. [PMID: 39162516 PMCID: PMC11448445 DOI: 10.1128/spectrum.00441-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Accepted: 07/03/2024] [Indexed: 08/21/2024] Open
Abstract
Trichoderma reesei, the main filamentous fungus used for industrial cellulase production, was long considered to be asexual. The recent discovery of the mating type locus in the natural isolate QM6a and the possibility to cross this sterile female strain with a fertile natural female strain opened up a new avenue for strain optimization. We crossed the hyperproducer RutC30 with a compatible female ascospore-derived isolate of the wild-type strain CBS999.97 and analyzed about 300 offspring. A continuous distribution of secreted protein levels was observed in the progeny, confirming the involvement of several mutated loci in the hyperproductive phenotype. A bias toward MAT1-2 strains was identified for higher producers, but not directly linked to the Mating-type locus itself. Transgressive phenotypes were observed in terms of both productivity and secretome quality, with offspring that outperform their parents for three enzymatic activities. Genomic sequences of the 10 best producers highlighted the genetic diversity generated and the involvement of parental alleles in hyperproduction and fertility. IMPORTANCE The filamentous fungus Trichoderma reesei produces cellulolytic enzymes that are essential for the hydrolysis of lignocellulosic biomass into monomerics sugars. The filamentous fungus T. reesei produces cellulolytic enzymes that are essential for the hydrolysis of lignocellulosic biomass into monomerics sugars, which can in turn be fermented to produce second-generation biofuels and bioproducts. Production performance improvement, which is essential to reduce production cost, relies on classical mutagenesis and genetic engineering techniques. Although sexual reproduction is a powerful tool for improving domesticated species, it is often difficult to apply to industrial fungi since most of them are considered asexual. In this study, we demonstrated that outbreeding is an efficient strategy to optimize T. reesei. Crossing between a natural isolate and a mutagenized strain generated a biodiverse progeny with some offspring displaying transgressive phenotype for cellulase activities.
Collapse
Affiliation(s)
- Laetitia Chan Ho Tong
- Biotechnology Department, IFP Energies nouvelles (IFPEN), 92852 Rueil-Malmaison, France
| | - Etienne Jourdier
- Biotechnology Department, IFP Energies nouvelles (IFPEN), 92852 Rueil-Malmaison, France
| | - Delphine Naquin
- Institute for Integrative Biology of the Cell (I2BC), Université Paris-Saclay, CEA, CNRS, 91198 Gif-sur-Yvette, France
| | - Fadhel Ben Chaabane
- Biotechnology Department, IFP Energies nouvelles (IFPEN), 92852 Rueil-Malmaison, France
| | - Thiziri Aouam
- Biotechnology Department, IFP Energies nouvelles (IFPEN), 92852 Rueil-Malmaison, France
| | - Gwladys Chartier
- Biotechnology Department, IFP Energies nouvelles (IFPEN), 92852 Rueil-Malmaison, France
| | - Itzel Castro González
- Biotechnology Department, IFP Energies nouvelles (IFPEN), 92852 Rueil-Malmaison, France
| | - Antoine Margeot
- Biotechnology Department, IFP Energies nouvelles (IFPEN), 92852 Rueil-Malmaison, France
| | - Frederique Bidard
- Biotechnology Department, IFP Energies nouvelles (IFPEN), 92852 Rueil-Malmaison, France
| |
Collapse
|
2
|
Vezzola M, Tosi S, Doria E, Bonazzi M, Alvaro M, Sanfilippo A. Interaction between a Martian Regolith Simulant and Fungal Organic Acids in the Biomining Perspective. J Fungi (Basel) 2023; 9:976. [PMID: 37888232 PMCID: PMC10607307 DOI: 10.3390/jof9100976] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 09/25/2023] [Accepted: 09/25/2023] [Indexed: 10/28/2023] Open
Abstract
The aim of this study was to evaluate the potential of Aspergillus tubingensis in extracting metals from rocks simulating Martian regolith through biomining. The results indicated that the fungal strain produced organic acids, particularly oxalic acid, in the first five days, leading to a rapid reduction in the pH of the culture medium. This acidic medium is ideal for bioleaching, a process that employs acidolysis and complexolysis to extract metals from rocks. Additionally, the strain synthesized siderophores, molecules capable of mobilizing metals from solid matrices, as verified by the blue CAS colorimetric test. The secretion of siderophores in the culture medium proved advantageous for biomining. The siderophores facilitated the leaching of metal ions, such as manganese, from the rock matrix into the acidified water solution. In addition, the susceptibility of the Martian regolith simulant to the biomining process was assessed by determining the particle size distribution, acid composition after treatment, and geochemical composition of the rock. Although the preliminary results demonstrate successful manganese extraction, further research is required to optimize the extraction technique. To conclude, the A. tubingensis strain exhibits promising abilities in extracting metals from rocks through biomining. Its use could prove useful in future in situ mining operations and environmental remediation efforts. Further research is required to optimize the process and evaluate its feasibility on a larger scale.
Collapse
Affiliation(s)
- Michele Vezzola
- Department of Earth and Environmental Sciences, University of Pavia, Via Ferrata 1, 27100 Pavia, Italy; (S.T.); (M.A.); (A.S.)
| | - Solveig Tosi
- Department of Earth and Environmental Sciences, University of Pavia, Via Ferrata 1, 27100 Pavia, Italy; (S.T.); (M.A.); (A.S.)
| | - Enrico Doria
- Department of Biology and Biotechnology, University of Pavia, Via Ferrata 9, 27100 Pavia, Italy;
| | - Mattia Bonazzi
- Institute of Geosciences and Earth Resources of Pavia, C.N.R, 27100 Pavia, Italy;
| | - Matteo Alvaro
- Department of Earth and Environmental Sciences, University of Pavia, Via Ferrata 1, 27100 Pavia, Italy; (S.T.); (M.A.); (A.S.)
| | - Alessio Sanfilippo
- Department of Earth and Environmental Sciences, University of Pavia, Via Ferrata 1, 27100 Pavia, Italy; (S.T.); (M.A.); (A.S.)
| |
Collapse
|
3
|
Senghor LA, Ortega-Beltran A, Atehnkeng J, Callicott KA, Cotty PJ, Bandyopadhyay R. The Atoxigenic Biocontrol Product Aflasafe SN01 Is a Valuable Tool to Mitigate Aflatoxin Contamination of Both Maize and Groundnut Cultivated in Senegal. PLANT DISEASE 2020; 104:510-520. [PMID: 31790640 DOI: 10.1094/pdis-03-19-0575-re] [Citation(s) in RCA: 50] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Aflatoxin contamination of groundnut and maize infected by Aspergillus section Flavi fungi is common throughout Senegal. The use of biocontrol products containing atoxigenic Aspergillus flavus strains to reduce crop aflatoxin content has been successful in several regions, but no such products are available in Senegal. The biocontrol product Aflasafe SN01 was developed for use in Senegal. The four active ingredients of Aflasafe SN01 are atoxigenic A. flavus genotypes native to Senegal and distinct from active ingredients used in other biocontrol products. Efficacy tests on groundnut and maize in farmers' fields were carried out in Senegal during the course of 5 years. Active ingredients were monitored with vegetative compatibility analyses. Significant (P < 0.05) displacement of aflatoxin producers occurred in all years, districts, and crops. In addition, crops from Aflasafe SN01-treated fields contained significantly (P < 0.05) fewer aflatoxins both at harvest and after storage. Most crops from treated fields contained aflatoxin concentrations permissible in both local and international markets. Results suggest that Aflasafe SN01 is an effective tool for aflatoxin mitigation in groundnut and maize. Large-scale use of Aflasafe SN01 should provide health, trade, and economic benefits for Senegal.[Formula: see text] Copyright © 2020 The Author(s). This is an open access article distributed under the CC BY 4.0 International license.
Collapse
Affiliation(s)
- L A Senghor
- La Direction de Protection Végétaux, BP20054 Dakar, Senegal
| | - A Ortega-Beltran
- International Institute of Tropical Agriculture, Ibadan, Nigeria
| | - J Atehnkeng
- Chitedze Research Station, International Institute of Tropical Agriculture, Lilongwe, Malawi
| | - K A Callicott
- U.S. Department of Agriculture-Agricultural Research Service, School of Plant Sciences, The University of Arizona, Tucson, AZ 85721, U.S.A
| | - P J Cotty
- U.S. Department of Agriculture-Agricultural Research Service, School of Plant Sciences, The University of Arizona, Tucson, AZ 85721, U.S.A
| | - R Bandyopadhyay
- International Institute of Tropical Agriculture, Ibadan, Nigeria
| |
Collapse
|
4
|
Ojiambo PS, Battilani P, Cary JW, Blum BH, Carbone I. Cultural and Genetic Approaches to Manage Aflatoxin Contamination: Recent Insights Provide Opportunities for Improved Control. PHYTOPATHOLOGY 2018; 108:1024-1037. [PMID: 29869954 DOI: 10.1094/phyto-04-18-0134-rvw] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Aspergillus flavus is a morphologically complex species that can produce the group of polyketide derived carcinogenic and mutagenic secondary metabolites, aflatoxins, as well as other secondary metabolites such as cyclopiazonic acid and aflatrem. Aflatoxin causes aflatoxicosis when aflatoxins are ingested through contaminated food and feed. In addition, aflatoxin contamination is a major problem, from both an economic and health aspect, in developing countries, especially Asia and Africa, where cereals and peanuts are important food crops. Earlier measures for control of A. flavus infection and consequent aflatoxin contamination centered on creating unfavorable environments for the pathogen and destroying contaminated products. While development of atoxigenic (nonaflatoxin producing) strains of A. flavus as viable commercial biocontrol agents has marked a unique advance for control of aflatoxin contamination, particularly in Africa, new insights into the biology and sexuality of A. flavus are now providing opportunities to design improved atoxigenic strains for sustainable biological control of aflatoxin. Further, progress in the use of molecular technologies such as incorporation of antifungal genes in the host and host-induced gene silencing, is providing knowledge that could be harnessed to develop germplasm that is resistant to infection by A. flavus and aflatoxin contamination. This review summarizes the substantial progress that has been made to understand the biology of A. flavus and mitigate aflatoxin contamination with emphasis on maize. Concepts developed to date can provide a basis for future research efforts on the sustainable management of aflatoxin contamination.
Collapse
Affiliation(s)
- Peter S Ojiambo
- First and fifth authors: Center for Integrated Fungal Research, Department of Entomology and Plant Pathology, North Carolina State University, Raleigh 27695; second author: Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Via Emilia Parmense 84, 29122 Piacenza, Italy; third author: U.S. Department of Agriculture-Agriculture Research Service, SRRC, New Orleans, LA 70124; and fourth author: Department of Plant Pathology, University of Arkansas, Fayetteville 72701
| | - Paola Battilani
- First and fifth authors: Center for Integrated Fungal Research, Department of Entomology and Plant Pathology, North Carolina State University, Raleigh 27695; second author: Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Via Emilia Parmense 84, 29122 Piacenza, Italy; third author: U.S. Department of Agriculture-Agriculture Research Service, SRRC, New Orleans, LA 70124; and fourth author: Department of Plant Pathology, University of Arkansas, Fayetteville 72701
| | - Jeffrey W Cary
- First and fifth authors: Center for Integrated Fungal Research, Department of Entomology and Plant Pathology, North Carolina State University, Raleigh 27695; second author: Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Via Emilia Parmense 84, 29122 Piacenza, Italy; third author: U.S. Department of Agriculture-Agriculture Research Service, SRRC, New Orleans, LA 70124; and fourth author: Department of Plant Pathology, University of Arkansas, Fayetteville 72701
| | - Burt H Blum
- First and fifth authors: Center for Integrated Fungal Research, Department of Entomology and Plant Pathology, North Carolina State University, Raleigh 27695; second author: Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Via Emilia Parmense 84, 29122 Piacenza, Italy; third author: U.S. Department of Agriculture-Agriculture Research Service, SRRC, New Orleans, LA 70124; and fourth author: Department of Plant Pathology, University of Arkansas, Fayetteville 72701
| | - Ignazio Carbone
- First and fifth authors: Center for Integrated Fungal Research, Department of Entomology and Plant Pathology, North Carolina State University, Raleigh 27695; second author: Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Via Emilia Parmense 84, 29122 Piacenza, Italy; third author: U.S. Department of Agriculture-Agriculture Research Service, SRRC, New Orleans, LA 70124; and fourth author: Department of Plant Pathology, University of Arkansas, Fayetteville 72701
| |
Collapse
|