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Li J, Luo Z, Zhang C, Qu X, Chen M, Song T, Yuan J. Seasonal Variation in the Rhizosphere and Non-Rhizosphere Microbial Community Structures and Functions of Camellia yuhsienensis Hu. Microorganisms 2020; 8:microorganisms8091385. [PMID: 32927703 PMCID: PMC7564921 DOI: 10.3390/microorganisms8091385] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2020] [Revised: 09/04/2020] [Accepted: 09/09/2020] [Indexed: 12/21/2022] Open
Abstract
Camellia yuhsienensis Hu, endemic to China, is a predominant oilseed crop, due to its high yield and pathogen resistance. Past studies have focused on the aboveground parts of C. yuhsienensis, whereas the microbial community of the rhizosphere has not been reported yet. This study is the first time to explore the influence of seasonal variation on the microbial community in the rhizosphere of C. yuhsienensis using high-throughput sequencing. The results showed that the dominant bacteria in the rhizosphere of C. yuhsienensis were Chloroflexi, Proteobacteria, Acidobacteria, Actinobacteria, and Planctomycetes, and the dominant fungi were Ascomycota, Basidiomycota, and Mucoromycota. Seasonal variation has significant effects on the abundance of the bacterial and fungal groups in the rhizosphere. A significant increase in bacterial abundance and diversity in the rhizosphere reflected the root activity of C. yuhsienensis in winter. Over the entire year, there were weak correlations between microorganisms and soil physiochemical properties in the rhizosphere. In this study, we found that the bacterial biomarkers in the rhizosphere were chemoorganotrophic Gram-negative bacteria that grow under aerobic conditions, and fungal biomarkers, such as Trichoderma, Mortierella, and Lecanicillium, exhibited protection against pathogens in the rhizosphere. In the rhizosphere of C. yuhsienensis, the dominant functions of the bacteria included nitrogen metabolism, oxidative phosphorylation, glycine, serine and threonine metabolism, glutathione metabolism, and sulfur metabolism. The dominant fungal functional groups were endophytes and ectomycorrhizal fungi of a symbiotroph trophic type. In conclusion, seasonal variation had a remarkable influence on the microbial communities and functions, which were also significantly different in the rhizosphere and non-rhizosphere of C. yuhsienensis. The rhizosphere of C. yuhsienensis provides suitable conditions with good air permeability that allows beneficial bacteria and fungi to dominate the soil microbial community, which can improve the growth and pathogen resistance of C. yuhsienensis.
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Moreno ML, Bernaschini ML, Pérez-Harguindeguy N, Lomba A, Valladares G. Chaco forest fragmentation effects on leaf litter decomposition are not explained by changes in litter fauna. AUSTRAL ECOL 2019. [DOI: 10.1111/aec.12824] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- María Laura Moreno
- Instituto Multidisciplinario de Biología Vegetal (CONICET-Universidad Nacional de Córdoba); Av. Vélez Sarsfield Córdoba 1611-(X5016GCA) Argentina
- Universidad Siglo 21; Córdoba Argentina
| | - María Laura Bernaschini
- Instituto Multidisciplinario de Biología Vegetal (CONICET-Universidad Nacional de Córdoba); Av. Vélez Sarsfield Córdoba 1611-(X5016GCA) Argentina
- Centro de Investigaciones Entomológicas de Córdoba; FCEFN; Universidad Nacional de Córdoba; Córdoba Argentina
| | - Natalia Pérez-Harguindeguy
- Instituto Multidisciplinario de Biología Vegetal (CONICET-Universidad Nacional de Córdoba); Av. Vélez Sarsfield Córdoba 1611-(X5016GCA) Argentina
| | - Angela Lomba
- Centro de Investigação em Biodiversidade e Recursos Genéticos (CIBIO); Vairão Portugal
- Alterra; Wageningen University and Research Centre; AAWageningen The Netherlands
| | - Graciela Valladares
- Instituto Multidisciplinario de Biología Vegetal (CONICET-Universidad Nacional de Córdoba); Av. Vélez Sarsfield Córdoba 1611-(X5016GCA) Argentina
- Centro de Investigaciones Entomológicas de Córdoba; FCEFN; Universidad Nacional de Córdoba; Córdoba Argentina
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Souty-Grosset C, Faberi A. Effect of agricultural practices on terrestrial isopods: a review. Zookeys 2018:63-96. [PMID: 30564032 PMCID: PMC6288264 DOI: 10.3897/zookeys.801.24680] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2018] [Accepted: 09/12/2018] [Indexed: 11/21/2022] Open
Abstract
Terrestrial isopods (approximately 3700 known species in the world) are encountered in temperate and tropical regions, from the seashore to high altitudes and from floodplain forests to deserts. They are known to contribute to soil biodiversity. Environmental factors and anthropogenic actions, particularly land use changes such as primarily agricultural practices, and urbanization affect soil biodiversity and their functions. Human practices, such as soil tillage, pesticide application, chemical pollution, along with soil acidification adversely affect isopod abundance and diversity. It is thus important to recognise the vital contributions of soil biodiversity in support of environmental quality protection through maintaining soil functions and their significance to sustainable land use. This review will also deal with recent studies attempting to evaluate the impact of returning to an environmentally friendly agriculture by restoring refuge habitats such as grass strips, hedges, and woodlands for terrestrial isopods.
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Affiliation(s)
- Catherine Souty-Grosset
- Université de Poitiers, UMR CNRS 7267, Laboratoire Ecologie et Biologie des Interactions, Equipe Ecologie Evolution Symbiose, 5 rue Albert Turpain, TSA 51106, 86073 Poitiers Cedex 9, France University of Poitiers Poitiers France
| | - Ariel Faberi
- Terapéutica Vegetal, Grupo Investigación Zoología Agrícola, Facultad de Ciencias Agrarias, Universidad Nacional de Mar del Plata, Argentina Universidad Nacional de Mar del Plata Mar del Plata Argentina
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Coq S, Nahmani J, Resmond R, Segrestin J, David J, Schevin P, Kazakou E. Intraspecific variation in litter palatability to macroarthropods in response to grazing and soil fertility. Funct Ecol 2018. [DOI: 10.1111/1365-2435.13205] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Sylvain Coq
- CEFE Univ Montpellier, CNRS, Univ Paul Valéry Montpellier 3, EPHE Montpellier France
| | - Johanne Nahmani
- CEFE, CNRS Univ Montpellier, Univ Paul Valéry Montpellier 3, EPHE Montpellier France
| | - Rémi Resmond
- INRA‐Agrocampus‐Ouest UMR PEGASE St Gilles France
| | - Jules Segrestin
- CEFE, CNRS Univ Montpellier, Univ Paul Valéry Montpellier 3, EPHE Montpellier France
| | - Jean‐François David
- CEFE, CNRS Univ Montpellier, Univ Paul Valéry Montpellier 3, EPHE Montpellier France
| | - Patrick Schevin
- CEFE, CNRS Univ Montpellier, Univ Paul Valéry Montpellier 3, EPHE Montpellier France
| | - Elena Kazakou
- Montpellier Supagro and CEFE, CNRS Univ Montpellier, Univ Paul Valéry Montpellier 3, EPHE Montpellier France
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Campos-Filho IS, Montesanto G, Araujo PB, Taiti S. New species and new records of terrestrial isopods (Crustacea, Isopoda, Oniscidea) from Brazil. IHERINGIA. SERIE ZOOLOGIA 2017. [DOI: 10.1590/1678-4766e2017034] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
ABSTRACT. A large collection of terrestrial isopods from different Brazilian regions was examined. Two new species of Amazoniscus Lemos de Castro, 1967 (Scleropactidae) are described: A. zimmeri Campos-Filho, Montesanto & Araujo sp. nov. from the state of Pará and A. schmidti Campos-Filho, Montesanto & Taiti sp. nov. from the state of Minas Gerais. Pseudotyphloscia alba (Dollfus, 1898) (Philosciidae) is firstly recorded from Brazil. The systematic position of Venezillo tuberosus (Budde-Lund, 1904) is discussed and transferred to Ctenorillo Verhoeff, 1942. Androdeloscia lejeunei (Lemos de Castro & Souza, 1986) and Diploexochus echinatus Brandt, 1833 from the state of Pará, are redescribed.
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Nocchi SR, de Moura-Costa GF, Novello CR, Rodrigues J, Longhini R, de Mello JCP, Filho BPD, Nakamura CV, Ueda-Nakamura T. In vitro Cytotoxicity and Anti-herpes Simplex Virus Type 1 Activity of Hydroethanolic Extract, Fractions, and Isolated Compounds from Stem Bark of Schinus terebinthifolius Raddi. Pharmacogn Mag 2016; 12:160-4. [PMID: 27076754 PMCID: PMC4809172 DOI: 10.4103/0973-1296.177903] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/05/2022] Open
Abstract
Background: Herpes simplex virus type 1 (HSV-1) is associated with orofacial infections and is transmitted by direct contact with infected secretions. Several efforts have been expended in the search for drugs to the treatment for herpes. Schinus terebinthifolius is used in several illnesses and among them, for the topical treatment of skin wounds, especially wounds of mucous membranes, whether infected or not. Objective: To evaluate the cytotoxicity and anti-HSV-1 activity of the crude hydroethanolic extract (CHE) from the stem bark of S. terebinthifolius, as well as its fractions and isolated compounds. Materials and Methods: The CHE was subjected to bioguided fractionation. The anti-HSV-1 activity and the cytotoxicity of the CHE, its fractions, and isolated compounds were evaluated in vitro by SRB method. A preliminar investigation of the action of CHE in the virus–host interaction was conducted by the same assay. Results: CHE presented flavan-3-ols and showed anti-HSV-1 activity, better than its fractions and isolated compounds. The class of substances found in CHE can bind to proteins to form unstable complexes and enveloped viruses, as HSV-1 may be vulnerable to this action. Our results suggest that the CHE interfered with virion envelope structures, masking viral receptors that are necessary for adsorption or entry into host cells. Conclusion: The plant investigated exhibited potential for future development treatment against HSV-1, but further tests are necessary, especially to elucidate the mechanism of action of CHE, as well as preclinical and clinical studies to confirm its safety and efficacy. SUMMARY Crude hydroethanolic extract (CHE) presents promising activity against herpes simplex virus type 1 (HSV 1), with selectivity index (SI) = 22.50 CHE has flavan-3-ols in its composition, such as catechin and gallocatechin The fractions and isolated compounds obtained from CHE by bioguided fractionation are less active than the CHE against HSV-1 CHE interferes with viral entry process in the host cell and acts directly on the viral particle.
Abbreviations used: HSV: Herpes simplex virus, CHE: Crude hydroethanolic extract, WF: Water fraction, AF: Ethyl-acetate fraction, MPLC: Medium-performance liquid chromatography, TLC: Thin-layer chromatography, NMR: Nuclear magnetic resonance, ESI-MS: Electrospray ionization mass spectrometry, SRB: Sulforhodamine B, CPE: Cytopathic effect, CC50: 50% cytotoxic concentration, EC50: 50% effective concentration, PBS: Phosphate-buffered saline.
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Affiliation(s)
- Samara Requena Nocchi
- Post-Graduate Program in Pharmaceutical Sciences, State University of Maringá, Maringá, Paraná, Brazil
| | | | - Claudio Roberto Novello
- Coordination of Chemical Engineering, Federal Technical University of Paraná, Francisco Beltrão Campus, Santa Barbara Line s/n, BR-85601-970, Francisco Beltrão, Paraná, Brazil
| | - Juliana Rodrigues
- Post-Graduate Program in Pharmaceutical Sciences, State University of Maringá, Maringá, Paraná, Brazil
| | - Renata Longhini
- Department of Pharmacy, State University of Maringá, Av. Colombo 5790, BR-87020-900, Maringá, Paraná, Brazil
| | - João Carlos Palazzo de Mello
- Post-Graduate Program in Pharmaceutical Sciences, State University of Maringá, Maringá, Paraná, Brazil; Department of Pharmacy, State University of Maringá, Av. Colombo 5790, BR-87020-900, Maringá, Paraná, Brazil
| | - Benedito Prado Dias Filho
- Post-Graduate Program in Pharmaceutical Sciences, State University of Maringá, Maringá, Paraná, Brazil; Department of Health Basic Sciences, State University of Maringá, Av. Colombo 5790, BR-87020-900, Maringá, Paraná, Brazil
| | - Celso Vataru Nakamura
- Post-Graduate Program in Pharmaceutical Sciences, State University of Maringá, Maringá, Paraná, Brazil; Department of Health Basic Sciences, State University of Maringá, Av. Colombo 5790, BR-87020-900, Maringá, Paraná, Brazil
| | - Tânia Ueda-Nakamura
- Post-Graduate Program in Pharmaceutical Sciences, State University of Maringá, Maringá, Paraná, Brazil; Department of Health Basic Sciences, State University of Maringá, Av. Colombo 5790, BR-87020-900, Maringá, Paraná, Brazil
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