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Shvedov NR, Analoui S, Dafalias T, Bedell BL, Gardner TJ, Scott BB. In vivo imaging in transgenic songbirds reveals superdiffusive neuron migration in the adult brain. Cell Rep 2024; 43:113759. [PMID: 38345898 DOI: 10.1016/j.celrep.2024.113759] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Revised: 12/01/2023] [Accepted: 01/23/2024] [Indexed: 03/02/2024] Open
Abstract
Neuron migration is a key phase of neurogenesis, critical for the assembly and function of neuronal circuits. In songbirds, this process continues throughout life, but how these newborn neurons disperse through the adult brain is unclear. We address this question using in vivo two-photon imaging in transgenic zebra finches that express GFP in young neurons and other cell types. In juvenile and adult birds, migratory cells are present at a high density, travel in all directions, and make frequent course changes. Notably, these dynamic migration patterns are well fit by a superdiffusive model. Simulations reveal that these superdiffusive dynamics are sufficient to disperse new neurons throughout the song nucleus HVC. These results suggest that superdiffusive migration may underlie the formation and maintenance of nuclear brain structures in the postnatal brain and indicate that transgenic songbirds are a useful resource for future studies into the mechanisms of adult neurogenesis.
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Affiliation(s)
- Naomi R Shvedov
- Graduate Program for Neuroscience, Boston University, Boston, MA 02215, USA
| | - Sina Analoui
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215, USA
| | - Theresia Dafalias
- Graduate Program for Neuroscience, Boston University, Boston, MA 02215, USA
| | - Brooke L Bedell
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215, USA
| | - Timothy J Gardner
- Phil and Penny Knight Campus for Accelerating Scientific Impact, University of Oregon, Eugene, OR 97403, USA
| | - Benjamin B Scott
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215, USA; Neurophotonics Center, Photonics Center, and Center for Systems Neuroscience, Boston University, Boston, MA 02215, USA.
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Davenport AA, Lu Y, Gallegos CA, Massicano AVF, Heinzman KA, Song PN, Sorace AG, Cogan NG. Mathematical Model of Triple-Negative Breast Cancer in Response to Combination Chemotherapies. Bull Math Biol 2022; 85:7. [PMID: 36542180 DOI: 10.1007/s11538-022-01108-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2022] [Accepted: 11/14/2022] [Indexed: 12/24/2022]
Abstract
Triple-negative breast cancer (TNBC) is a heterogenous disease that is defined by its lack of targetable receptors, thus limiting treatment options and resulting in higher rates of metastasis and recurrence. Combination chemotherapy treatments, which inhibit tumor cell proliferation and regeneration, are a major component of standard-of-care treatment of TNBC. In this manuscript, we build a coupled ordinary differential equation model of TNBC with compartments that represent tumor proliferation, necrosis, apoptosis, and immune response to computationally describe the biological tumor affect to a combination of chemotherapies, doxorubicin (DRB) and paclitaxel (PTX). This model is parameterized using longitudinal [18F]-fluorothymidine positron emission tomography (FLT-PET) imaging data which allows for a noninvasive molecular imaging approach to quantify the tumor proliferation and tumor volume measurements for two murine models of TNBC. Animal models include a human cell line xenograft model, MDA-MB-231, and a syngeneic 4T1 mammary carcinoma model. The mathematical models are parameterized and the percent necrosis at the end time point is predicted and validated using histological hematoxylin and eosin (H&E) data. Global Sobol' sensitivity analysis is conducted to further understand the role each parameter plays in the model's goodness of fit to the data. In both the MDA-MB-231 and the 4T1 tumor models, the designed mathematical model can accurately describe both tumor volume changes and final necrosis volume. This can give insight into the ordering, dosing, and timing of DRB and PTX treatment. More importantly, this model can also give insight into future novel combinations of therapies and how the immune system plays a role in therapeutic response to TNBC, due to its calibration to two types of TNBC murine models.
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Affiliation(s)
- Angelica A Davenport
- Department of Mathematics, Florida State University, 1017 Academic Way, Tallahassee, FL, 32304, USA.
| | - Yun Lu
- Department of Radiology, University of Alabama at Birmingham, Birmingham, AL, USA
- O'Neal Comprehensive Cancer Center, University of Alabama at Birmingham, Birmingham, AL, USA
| | - Carlos A Gallegos
- Department of Biomedical Engineering, University of Alabama at Birmingham, Birmingham, AL, USA
| | | | - Katherine A Heinzman
- Department of Biomedical Engineering, University of Alabama at Birmingham, Birmingham, AL, USA
| | - Patrick N Song
- Department of Radiology, University of Alabama at Birmingham, Birmingham, AL, USA
- O'Neal Comprehensive Cancer Center, University of Alabama at Birmingham, Birmingham, AL, USA
| | - Anna G Sorace
- Department of Radiology, University of Alabama at Birmingham, Birmingham, AL, USA
- O'Neal Comprehensive Cancer Center, University of Alabama at Birmingham, Birmingham, AL, USA
- Department of Biomedical Engineering, University of Alabama at Birmingham, Birmingham, AL, USA
| | - N G Cogan
- Department of Mathematics, Florida State University, 1017 Academic Way, Tallahassee, FL, 32304, USA
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A Tale of Two: When Neural Stem Cells Encounter Hypoxia. Cell Mol Neurobiol 2022:10.1007/s10571-022-01293-6. [DOI: 10.1007/s10571-022-01293-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Accepted: 10/02/2022] [Indexed: 11/12/2022]
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Meng K, Cattani P, Villecco F. Brain Tumor Segmentation Based on Bendlet Transform and Improved Chan-Vese Model. ENTROPY (BASEL, SWITZERLAND) 2022; 24:1199. [PMID: 36141085 PMCID: PMC9497468 DOI: 10.3390/e24091199] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Revised: 08/21/2022] [Accepted: 08/24/2022] [Indexed: 06/16/2023]
Abstract
Automated segmentation of brain tumors is a difficult procedure due to the variability and blurred boundary of the lesions. In this study, we propose an automated model based on Bendlet transform and improved Chan-Vese (CV) model for brain tumor segmentation. Since the Bendlet system is based on the principle of sparse approximation, Bendlet transform is applied to describe the images and map images to the feature space and, thereby, first obtain the feature set. This can help in effectively exploring the mapping relationship between brain lesions and normal tissues, and achieving multi-scale and multi-directional registration. Secondly, the SSIM region detection method is proposed to preliminarily locate the tumor region from three aspects of brightness, structure, and contrast. Finally, the CV model is solved by the Hermite-Shannon-Cosine wavelet homotopy method, and the boundary of the tumor region is more accurately delineated by the wavelet transform coefficient. We randomly selected some cross-sectional images to verify the effectiveness of the proposed algorithm and compared with CV, Ostu, K-FCM, and region growing segmentation methods. The experimental results showed that the proposed algorithm had higher segmentation accuracy and better stability.
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Affiliation(s)
- Kexin Meng
- College of Information and Electrical Engineering, China Agricultural University, Beijing 100083, China
| | - Piercarlo Cattani
- Department of Computer, Control and Management Engineering, University of Rome “La Sapienza”, Via Ariosto 25, 00185 Roma, Italy
| | - Francesco Villecco
- Department of Industrial Engineering, University of Salerno, via Giovanni Paolo II 132, 84084 Fisciano, Italy
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