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For: Wilson A, Maréchal C, MacDonald HR. Biased V beta usage in immature thymocytes is independent of DJ beta proximity and pT alpha pairing. J Immunol 2001;166:51-7. [PMID: 11123276 DOI: 10.4049/jimmunol.166.1.51] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Number Cited by Other Article(s)
1
Surman SL, Crawford J, Dash P, Tonkonogy SL, Thomas PG, Hurwitz JL. Microbiome Shapes the T Cell Receptor Repertoire among CD4+CD8+ Thymocytes. Biomedicines 2022;10:biomedicines10123015. [PMID: 36551771 PMCID: PMC9775422 DOI: 10.3390/biomedicines10123015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2022] [Revised: 11/08/2022] [Accepted: 11/11/2022] [Indexed: 11/24/2022]  Open
2
Wu GS, Culberson EJ, Allyn BM, Bassing CH. Poor-Quality Vβ Recombination Signal Sequences and the DNA Damage Response ATM Kinase Collaborate to Establish TCRβ Gene Repertoire and Allelic Exclusion. JOURNAL OF IMMUNOLOGY (BALTIMORE, MD. : 1950) 2022;208:2583-2592. [PMID: 35534211 PMCID: PMC9133172 DOI: 10.4049/jimmunol.2100489] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Accepted: 03/23/2022] [Indexed: 06/03/2023]
3
Wu GS, Yang-Iott KS, Klink MA, Hayer KE, Lee KD, Bassing CH. Poor quality Vβ recombination signal sequences stochastically enforce TCRβ allelic exclusion. J Exp Med 2021;217:151853. [PMID: 32526772 PMCID: PMC7478721 DOI: 10.1084/jem.20200412] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2020] [Revised: 05/06/2020] [Accepted: 05/12/2020] [Indexed: 12/15/2022]  Open
4
Inefficient V(D)J recombination underlies monogenic T cell receptor β expression. Proc Natl Acad Sci U S A 2020;117:18172-18174. [PMID: 32690689 PMCID: PMC7414081 DOI: 10.1073/pnas.2010077117] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]  Open
5
Lee KD, Bassing CH. Two Successive Inversional Vβ Rearrangements on a Single Tcrb Allele Can Contribute to the TCRβ Repertoire. THE JOURNAL OF IMMUNOLOGY 2019;204:78-86. [PMID: 31740488 DOI: 10.4049/jimmunol.1901105] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2019] [Accepted: 10/23/2019] [Indexed: 11/19/2022]
6
Van Braeckel-Budimir N, Gras S, Ladell K, Josephs TM, Pewe L, Urban SL, Miners KL, Farenc C, Price DA, Rossjohn J, Harty JT. A T Cell Receptor Locus Harbors a Malaria-Specific Immune Response Gene. Immunity 2017;47:835-847.e4. [PMID: 29150238 DOI: 10.1016/j.immuni.2017.10.013] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2017] [Revised: 08/02/2017] [Accepted: 10/26/2017] [Indexed: 01/05/2023]
7
Chromatin Domain Organization of the TCRb Locus and Its Perturbation by Ectopic CTCF Binding. Mol Cell Biol 2017;37:MCB.00557-16. [PMID: 28137913 DOI: 10.1128/mcb.00557-16] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2016] [Accepted: 01/25/2017] [Indexed: 01/23/2023]  Open
8
Horowitz JE, Bassing CH. Noncore RAG1 regions promote Vβ rearrangements and αβ T cell development by overcoming inherent inefficiency of Vβ recombination signal sequences. THE JOURNAL OF IMMUNOLOGY 2014;192:1609-19. [PMID: 24415779 DOI: 10.4049/jimmunol.1301599] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
9
Unifying model for molecular determinants of the preselection Vβ repertoire. Proc Natl Acad Sci U S A 2013;110:E3206-15. [PMID: 23918392 DOI: 10.1073/pnas.1304048110] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]  Open
10
Brady BL, Rupp LJ, Bassing CH. Requirement for dicer in survival of proliferating thymocytes experiencing DNA double-strand breaks. THE JOURNAL OF IMMUNOLOGY 2013;190:3256-66. [PMID: 23427252 DOI: 10.4049/jimmunol.1200957] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
11
Ndifon W, Gal H, Shifrut E, Aharoni R, Yissachar N, Waysbort N, Reich-Zeliger S, Arnon R, Friedman N. Chromatin conformation governs T-cell receptor Jβ gene segment usage. Proc Natl Acad Sci U S A 2012;109:15865-70. [PMID: 22984176 PMCID: PMC3465372 DOI: 10.1073/pnas.1203916109] [Citation(s) in RCA: 66] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
12
Li H, Ye C, Ji G, Wu X, Xiang Z, Li Y, Cao Y, Liu X, Douek DC, Price DA, Han J. Recombinatorial Biases and Convergent Recombination Determine Interindividual TCRβ Sharing in Murine Thymocytes. THE JOURNAL OF IMMUNOLOGY 2012;189:2404-13. [DOI: 10.4049/jimmunol.1102087] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
13
Shrimali S, Srivastava S, Varma G, Grinberg A, Pfeifer K, Srivastava M. An ectopic CTCF-dependent transcriptional insulator influences the choice of Vβ gene segments for VDJ recombination at TCRβ locus. Nucleic Acids Res 2012;40:7753-65. [PMID: 22718969 PMCID: PMC3439925 DOI: 10.1093/nar/gks556] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
14
Li H, Ye C, Ji G, Han J. Determinants of public T cell responses. Cell Res 2012;22:33-42. [PMID: 22212481 DOI: 10.1038/cr.2012.1] [Citation(s) in RCA: 88] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]  Open
15
Miles JJ, Douek DC, Price DA. Bias in the αβ T-cell repertoire: implications for disease pathogenesis and vaccination. Immunol Cell Biol 2011;89:375-87. [PMID: 21301479 DOI: 10.1038/icb.2010.139] [Citation(s) in RCA: 172] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
16
Immunology: Egocentric pre-T-cell receptors. Nature 2010;467:793-4. [PMID: 20944732 DOI: 10.1038/467793a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
17
Steinel NC, Brady BL, Carpenter AC, Yang-Iott KS, Bassing CH. Posttranscriptional silencing of VbetaDJbetaCbeta genes contributes to TCRbeta allelic exclusion in mammalian lymphocytes. THE JOURNAL OF IMMUNOLOGY 2010;185:1055-62. [PMID: 20562258 DOI: 10.4049/jimmunol.0903099] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
18
High throughput sequencing reveals a complex pattern of dynamic interrelationships among human T cell subsets. Proc Natl Acad Sci U S A 2010;107:1518-23. [PMID: 20080641 DOI: 10.1073/pnas.0913939107] [Citation(s) in RCA: 213] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
19
Furmanski AL, Bartok I, Chai JG, Singh Y, Ferreira C, Scott D, Holland SJ, Bourdeaux C, Crompton T, Dyson J. Peptide-specific, TCR-alpha-driven, coreceptor-independent negative selection in TCR alpha-chain transgenic mice. THE JOURNAL OF IMMUNOLOGY 2009;184:650-7. [PMID: 19995903 DOI: 10.4049/jimmunol.0902291] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
20
Bonnet M, Huang F, Benoukraf T, Cabaud O, Verthuy C, Boucher A, Jaeger S, Ferrier P, Spicuglia S. Duality of Enhancer Functioning Mode Revealed in a Reduced TCRβ Gene Enhancer Knockin Mouse Model. THE JOURNAL OF IMMUNOLOGY 2009;183:7939-48. [DOI: 10.4049/jimmunol.0902179] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
21
Carpenter AC, Yang-Iott KS, Chao LH, Nuskey B, Whitlow S, Alt FW, Bassing CH. Assembled DJ beta complexes influence TCR beta chain selection and peripheral V beta repertoire. THE JOURNAL OF IMMUNOLOGY 2009;182:5586-95. [PMID: 19380806 DOI: 10.4049/jimmunol.0803270] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
22
Franchini DM, Benoukraf T, Jaeger S, Ferrier P, Payet-Bornet D. Initiation of V(D)J recombination by Dbeta-associated recombination signal sequences: a critical control point in TCRbeta gene assembly. PLoS One 2009;4:e4575. [PMID: 19238214 PMCID: PMC2642999 DOI: 10.1371/journal.pone.0004575] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2008] [Accepted: 01/15/2009] [Indexed: 01/26/2023]  Open
23
Bassing CH, Whitlow S, Mostoslavsky R, Mostoslovasky R, Yang-Iott K, Ranganath S, Alt FW. Vbeta cluster sequences reduce the frequency of primary Vbeta2 and Vbeta14 rearrangements. Eur J Immunol 2008;38:2564-72. [PMID: 18792409 DOI: 10.1002/eji.200838347] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
24
Melenhorst JJ, Lay MDH, Price DA, Adams SD, Zeilah J, Sosa E, Hensel NF, Follmann D, Douek DC, Davenport MP, Barrett AJ. Contribution of TCR-beta locus and HLA to the shape of the mature human Vbeta repertoire. JOURNAL OF IMMUNOLOGY (BALTIMORE, MD. : 1950) 2008;180:6484-9. [PMID: 18453566 DOI: 10.4049/jimmunol.180.10.6484] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
25
Ferrero I, Grosjean F, Fiorini E, MacDonald HR. A critical lineage-nonspecific role for pTalpha in mediating allelic and isotypic exclusion in TCRbeta-transgenic mice. Eur J Immunol 2007;37:3220-8. [PMID: 17918204 DOI: 10.1002/eji.200737456] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
26
Wojciechowski J, Lai A, Kondo M, Zhuang Y. E2A and HEB are required to block thymocyte proliferation prior to pre-TCR expression. THE JOURNAL OF IMMUNOLOGY 2007;178:5717-26. [PMID: 17442955 PMCID: PMC2265380 DOI: 10.4049/jimmunol.178.9.5717] [Citation(s) in RCA: 85] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
27
Wu C, Ranganath S, Gleason M, Woodman BB, Borjeson TM, Alt FW, Bassing CH. Restriction of endogenous T cell antigen receptor beta rearrangements to Vbeta14 through selective recombination signal sequence modifications. Proc Natl Acad Sci U S A 2007;104:4002-7. [PMID: 17360467 PMCID: PMC1820698 DOI: 10.1073/pnas.0700081104] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]  Open
28
Aublin A, Ciofani M, Willkomm N, Hamrouni A, Szymczak-Workman AL, Takahashi T, Sandjeu Y, Guillaume P, Vignali DAA, Michielin O, Zúñiga-Pflücker JC, Maryanski JL. A natural structural variant of the mouse TCR beta-chain displays intrinsic receptor function and antigen specificity. THE JOURNAL OF IMMUNOLOGY 2006;177:8587-94. [PMID: 17142757 DOI: 10.4049/jimmunol.177.12.8587] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
29
Matsutani T, Ohmori T, Ogata M, Soga H, Yoshioka T, Suzuki R, Itoh T. Alteration of T-cell receptor repertoires during thymic T-cell development. Scand J Immunol 2006;64:53-60. [PMID: 16784491 DOI: 10.1111/j.1365-3083.2006.01776.x] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
30
Jackson AM, Krangel MS. Turning T-cell receptor ? recombination on and off: more questions than answers. Immunol Rev 2006;209:129-41. [PMID: 16448539 DOI: 10.1111/j.0105-2896.2006.00342.x] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
31
von Boehmer H. Unique features of the pre-T-cell receptor α-chain: not just a surrogate. Nat Rev Immunol 2005;5:571-7. [PMID: 15999096 DOI: 10.1038/nri1636] [Citation(s) in RCA: 109] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
32
Butler JE, Wertz N, Sun J, Sacco RE. Comparison of the expressed porcine Vbeta and Jbeta repertoire of thymocytes and peripheral T cells. Immunology 2005;114:184-93. [PMID: 15667563 PMCID: PMC1782068 DOI: 10.1111/j.1365-2567.2004.02072.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2004] [Revised: 10/08/2004] [Accepted: 10/08/2004] [Indexed: 11/27/2022]  Open
33
Livák F. In vitro and in vivo studies on the generation of the primary T-cell receptor repertoire. Immunol Rev 2004;200:23-35. [PMID: 15242393 DOI: 10.1111/j.0105-2896.2004.00170.x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
34
Livák F. Evolutionarily conserved pattern of gene segment usage within the mammalian TCRbeta locus. Immunogenetics 2003;55:307-14. [PMID: 12845497 DOI: 10.1007/s00251-003-0577-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2003] [Revised: 03/26/2003] [Indexed: 10/26/2022]
35
Senoo M, Wang L, Suzuki D, Takeda N, Shinkai Y, Habu S. Increase of TCR V beta accessibility within E beta regulatory region influences its recombination frequency but not allelic exclusion. JOURNAL OF IMMUNOLOGY (BALTIMORE, MD. : 1950) 2003;171:829-35. [PMID: 12847251 DOI: 10.4049/jimmunol.171.2.829] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
36
von Boehmer H, Aifantis I, Gounari F, Azogui O, Haughn L, Apostolou I, Jaeckel E, Grassi F, Klein L. Thymic selection revisited: how essential is it? Immunol Rev 2003;191:62-78. [PMID: 12614352 DOI: 10.1034/j.1600-065x.2003.00010.x] [Citation(s) in RCA: 155] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
37
Wu C, Bassing CH, Jung D, Woodman BB, Foy D, Alt FW. Dramatically increased rearrangement and peripheral representation of Vbeta14 driven by the 3'Dbeta1 recombination signal sequence. Immunity 2003;18:75-85. [PMID: 12530977 DOI: 10.1016/s1074-7613(02)00515-0] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
38
Ceredig R, Rolink T. A positive look at double-negative thymocytes. Nat Rev Immunol 2002;2:888-97. [PMID: 12415312 DOI: 10.1038/nri937] [Citation(s) in RCA: 151] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
39
Livák F, Petrie HT. Access roads for RAG-ged terrains: control of T cell receptor gene rearrangement at multiple levels. Semin Immunol 2002;14:297-309. [PMID: 12220931 DOI: 10.1016/s1044-5323(02)00063-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
40
Pacholczyk R, Kraj P, Ignatowicz L. Peptide specificity of thymic selection of CD4+CD25+ T cells. JOURNAL OF IMMUNOLOGY (BALTIMORE, MD. : 1950) 2002;168:613-20. [PMID: 11777953 DOI: 10.4049/jimmunol.168.2.613] [Citation(s) in RCA: 79] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
41
Livák F, Petrie HT. Somatic generation of antigen-receptor diversity: a reprise. Trends Immunol 2001;22:608-12. [PMID: 11698221 DOI: 10.1016/s1471-4906(01)02054-3] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
42
Gibbons D, Douglas NC, Barber DF, Liu Q, Sullo R, Geng L, Fehling HJ, von Boehmer H, Hayday AC. The biological activity of natural and mutant pTalpha alleles. J Exp Med 2001;194:695-703. [PMID: 11535637 PMCID: PMC2195948 DOI: 10.1084/jem.194.5.695] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]  Open
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