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Choudhury A, Saha S, Maiti NC, Datta S. Exploring structural features and potential lipid interactions of Pseudomonas aeruginosa type three secretion effector PemB by spectroscopic and calorimetric experiments. Protein Sci 2023; 32:e4627. [PMID: 36916835 PMCID: PMC10044109 DOI: 10.1002/pro.4627] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Revised: 03/06/2023] [Accepted: 03/10/2023] [Indexed: 03/15/2023]
Abstract
Type Three Secretion System (T3SS) is a sophisticated nano-scale weapon utilized by several gram negative bacteria under stringent spatio-temporal regulation to manipulate and evade host immune systems in order to cause infection. To the best of our knowledge, this present study is the first report where we embark upon characterizing inherent features of native type three secretion effector protein PemB through biophysical techniques. Herein, first, we demonstrate binding affinity of PemB for phosphoinositides through isothermal calorimetric titrations. Second, we shed light on its strong homo-oligomerization propensity in aqueous solution through multiple biophysical methods. Third, we also employ several spectroscopic techniques to delineate its disordered and helical conformation. Lastly, we perform a phylogenetic analysis of this new effector to elucidate evolutionary relationship with other organisms. Taken together, our results shall surely contribute to our existing knowledge of Pseudomonas aeruginosa secretome.
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Affiliation(s)
- Arkaprabha Choudhury
- Department of Structural Biology and BioinformaticsCSIR‐Indian Institute of Chemical Biology (CSIR‐IICB)Kolkata700032India
- Biological SciencesAcademy of Scientific and Innovative Research (AcSIR)201002GhaziabadIndia
| | - Saumen Saha
- Department of Structural Biology and BioinformaticsCSIR‐Indian Institute of Chemical Biology (CSIR‐IICB)Kolkata700032India
| | - Nakul Chandra Maiti
- Department of Structural Biology and BioinformaticsCSIR‐Indian Institute of Chemical Biology (CSIR‐IICB)Kolkata700032India
- Biological SciencesAcademy of Scientific and Innovative Research (AcSIR)201002GhaziabadIndia
| | - Saumen Datta
- Department of Structural Biology and BioinformaticsCSIR‐Indian Institute of Chemical Biology (CSIR‐IICB)Kolkata700032India
- Biological SciencesAcademy of Scientific and Innovative Research (AcSIR)201002GhaziabadIndia
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Sousa R, Vasconcelos J, Vera-Escalona I, Riera R. Occurrence of bacteria potentially pathogenic to humans in a harvested intertidal sea snail. MOLLUSCAN RESEARCH 2022. [DOI: 10.1080/13235818.2022.2028970] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Ricardo Sousa
- Observatório Oceânico da Madeira, Agência Regional para o Desenvolvimento da Investigação Tecnologia e Inovação (OOM/ARDITI) – Edifício Madeira Tecnopolo, Funchal, Portugal
- Direção Regional do Mar / Direção de Serviços de Monitorização, Estudos e Investigação do Mar (DRM/DSEIMar), Rua Virgílio Teixeira, Funchal, Portugal
- MARE - Marine and Environmental Sciences Centre, Agência Regional para o Desenvolvimento da Investigação Tecnologia e Inovação (ARDITI), Edifício Madeira Tecnopolo Piso 0, Funchal, Portugal
| | - Joana Vasconcelos
- MARE - Marine and Environmental Sciences Centre, Agência Regional para o Desenvolvimento da Investigação Tecnologia e Inovação (ARDITI), Edifício Madeira Tecnopolo Piso 0, Funchal, Portugal
- Faculdade de Ciências da Vida, Universidade da Madeira, Campus Universitário da Penteada, Funchal, Portugal
- Departamento de Ecología, Facultad de Ciencias, Universidad Católica de la Santísima Concepción, Concepción, Chile
| | - Iván Vera-Escalona
- Departamento de Ecología, Facultad de Ciencias, Universidad Católica de la Santísima Concepción, Concepción, Chile
- Centro de Investigación en Biodiversidad y Ambientes Sustentables (CIBAS), Universidad Católica de la Santísima Concepción, Concepción, Chile
| | - Rodrigo Riera
- Departamento de Ecología, Facultad de Ciencias, Universidad Católica de la Santísima Concepción, Concepción, Chile
- Grupo en Biodiversidad y Conservación, IU-ECOAQUA, Universidad de Las Palmas de Gran Canaria, Marine Scientific and Technological Park Telde, Spain
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A pilot metagenomic study reveals that community derived mobile phones are reservoirs of viable pathogenic microbes. Sci Rep 2021; 11:14102. [PMID: 34239006 PMCID: PMC8266881 DOI: 10.1038/s41598-021-93622-w] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2021] [Accepted: 06/28/2021] [Indexed: 11/28/2022] Open
Abstract
There is increasing attention focussed on the risks associated with mobile phones possibly serving as ‘Trojan Horse’ fomites for microbial transmission in healthcare settings. However, little is reported on the presence of microbes on community derived mobile phones which in 2021, numbered in the billions in circulation with majority being used on a daily basis. Identify viable microbial organisms swabbed from smartphones on a university campus. Entire surfaces of 5 mobile phones were swabbed and examined for their microbial content using pre-agar-based growths followed by downstream DNA metagenomic next-generation sequencing analysis. All phones were contaminated with viable microbes. 173 bacteria, 8 fungi, 8 protists, 53 bacteriophages, 317 virulence factor genes and 41 distinct antibiotic resistant genes were identified. While this research represents a pilot study, the snapshot metagenomic analysis of samples collected from the surface of mobile phones has revealed the presence of a large population of viable microbes and an array of antimicrobial resistant factors. With billions of phones in circulation, these devices might be responsible for the rise of community acquired infections. These pilot results highlight the importance of public health authorities considering mobile phones as ‘Trojan Horse’ devices for microbial transmission and ensure appropriate decontamination campaigns are implemented.
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Wilson G, Jackson V, Boyken L, Puig-Asensio M, Marra AR, Perencevich E, Schweizer ML, Diekema D, Breheny P, Petersen C. A randomized control trial evaluating efficacy of antimicrobial impregnated hospital privacy curtains in an intensive care setting. Am J Infect Control 2020; 48:862-868. [PMID: 32139090 DOI: 10.1016/j.ajic.2019.12.024] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2019] [Revised: 12/27/2019] [Accepted: 12/27/2019] [Indexed: 01/05/2023]
Abstract
BACKGROUND Acquisition of pathogens into health care settings from prior room occupants has been documented. Hospital room privacy curtains are at high risk for pathogenic bacterial contamination. Antimicrobial impregnated curtains could be effective in reducing contamination. METHODS Rooms within an intensive care unit at The University of Iowa Hospitals and Clinics were randomized to 3 arms. The 2 intervention arms: (1) halamine antimicrobial curtains (BioSmart curtain [BSC]) and (2) halamine antimicrobial curtains sprayed twice weekly with a sodium hypochlorite-based disinfecting spray (BSC-pre and BSC-post) and a third control arm (standard curtain [SC]). Samples were collected twice weekly for 3 weeks to assess pathogenic bacterial contamination. RESULTS The likelihood of remaining uncontaminated was 38% for SC, 37% for BSC, and 60% for the BSC-pre group. Time to event (contamination) analysis found no statistically significant difference between pathogenic contamination between the SC, BSC, and BSC-pre groups (P value = .1921). There was a decrease in average colony count for BSC curtains compared with control, however, this difference was not statistically significant. Hypochlorite spray was found to transiently decontaminate curtains, but effects dissipated after 72 hours. CONCLUSIONS BSC did not show a significant reduction in pathogenic contamination compared with control. Antimicrobial curtains could have a role in reducing environmental contamination in the health care setting. Future studies should be done to determine the long-term effects of using antimicrobial curtains in health care.
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Yehia HM, Al-Olayan EM, El-Khadragy MF, Metwally DM. In Vitro and In Vivo Control of Secondary Bacterial Infection Caused by Leishmania major. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2017; 14:E777. [PMID: 28703780 PMCID: PMC5551215 DOI: 10.3390/ijerph14070777] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/01/2017] [Revised: 07/08/2017] [Accepted: 07/10/2017] [Indexed: 12/13/2022]
Abstract
Bacterial infections of cutaneous leishmaniasis cause skin ulcers on mice, resulting in increased tissue deterioration, and these infections can be controlled with liquid allicin. To isolate and identify the incidences of real secondary bacterial infections in mice, we performed the current study by injecting mice (n = 50) with Leishmania major. L. major infections were initiated by an intramuscular injection of 0.1 mL Roswell Park Memorial Institute (RPMI 1640 media/mouse (107 promastigote/mL)). Scarring appeared 2-6 weeks after injection, and the bacteria were isolated from the skin ulcer tissues. Allicin (50 µL/mL) and ciprofloxacin (5 μg; Cip 5) were used for controlling L. major and bacteria. One hundred samples from skin ulcers of mice were examined, and 200 bacterial colonies were isolated. Forty-eight different genera and species were obtained and identified by Gram staining and physiological and biochemical characterization using identification kits. All samples were positive for secondary bacterial infections. Of the isolates, 79.16% were identified as Gram-negative bacteria, and 28.84% were identified as Gram-positive bacteria; only one yeast species was found. Interestingly, pure allicin liquid at a concentration 50 µL/mL exhibited antibacterial activity against a wide range of Gram-negative and some Gram-positive bacteria, in addition to yeast, and was 71.43% effective. Antimicrobial resistance patterns of all genera and species were determined using 15 different antibiotics. Allicin (50 µL/mL) and Cip 5 were the most effective against L. major and 92.30% of isolated bacteria. Stenotrophomonas maltophilia was the most resistant bacterium to the tested antibiotics with a survival rate of 73.33%, and it exhibited resistance to allicin.
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Affiliation(s)
- Hany M Yehia
- Department of Food Science and Nutrition, College of Food and Agriculture Sciences, King Saud University, Riyadh 11451, Saudi Arabia.
- Department of Food Science and Nutrition, Faculty of Home Economics, Helwan University, Cairo 11221, Egypt.
| | - Ebtesam M Al-Olayan
- Zoology Department, Faculty of Science, King Saud University, Riyadh 11495, Saudi Arabia.
- Chair Vaccines Research of Infectious Diseases, King Saud University, Riyadh 11495, Saudi Arabia.
| | - Manal F El-Khadragy
- Zoology Department, Faculty of Science, King Saud University, Riyadh 11495, Saudi Arabia.
- Chair Vaccines Research of Infectious Diseases, King Saud University, Riyadh 11495, Saudi Arabia.
- Zoology Department, Faculty of Science, Helwan University, Cairo 11790, Egypt.
| | - Dina M Metwally
- Zoology Department, Faculty of Science, King Saud University, Riyadh 11495, Saudi Arabia.
- Chair Vaccines Research of Infectious Diseases, King Saud University, Riyadh 11495, Saudi Arabia.
- Parasitology Department, Faculty of Veterinary Medicine, Zagazig University, Zagazig 12878, Egypt.
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Owusu M, Owusu-Dabo E, Acheampong G, Osei I, Amuasi J, Sarpong N, Annan A, Chiang HY, Kuo CH, Park SE, Marks F, Adu-Sarkodie Y. Pseudomonas oryzihabitans sepsis in a 1-year-old child with multiple skin rashes: a case report. J Med Case Rep 2017; 11:77. [PMID: 28330494 PMCID: PMC5362990 DOI: 10.1186/s13256-017-1230-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2016] [Accepted: 02/01/2017] [Indexed: 11/22/2022] Open
Abstract
Background Pseudomonas oryzihabitans is a Pseudomonas bacterial organism rarely implicated in human infections. The bacterium has been isolated in a few reported cases of neurosurgical infections and patients with end-stage cirrhosis, sickle cell disease, and community-acquired urinary tract infections. Limited information exists in developing countries, however, because of the lack of advanced microbiological tools for identification and characterization of this bacterium. This case report describes the isolation of a rare Pseudomonas bacterium in a patient presenting with sepsis and skin infection. Case presentation A 1-year-old girl was presented to a hospital in the northeastern part of Ghana with a 1-week history of pustular rashes on her scalp and neck, which occasionally ruptured, along with discharge of yellowish purulent fluid. The child is of Mole-Dagbon ethnicity and hails from the northern part of Ghana. Pseudomonas oryzihabitans was identified in the patient’s blood culture using the 16S ribosomal deoxyribonucleic acid sequencing technique. The rash on the patient’s scalp and skin resolved after continuous treatment with gentamicin while her condition improved clinically. Conclusions This finding suggests the potential of this bacterium to cause disease in unsuspected situations and emphasizes the need to have evidence for the use of the appropriate antibiotic in clinical settings, particularly in rural settings in Africa. It also brings to the fore the unreliability of conventional methods for identification of Pseudomonas bacteria in clinical samples and thus supports the use of 16S ribosomal deoxyribonucleic acid in making the diagnosis.
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Affiliation(s)
- Michael Owusu
- Kumasi Centre for Collaborative Research in Tropical Medicine, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana
| | - Ellis Owusu-Dabo
- Department of Global Health, School of Public Health, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana.
| | - Godfred Acheampong
- Kumasi Centre for Collaborative Research in Tropical Medicine, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana
| | - Isaac Osei
- Kumasi Centre for Collaborative Research in Tropical Medicine, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana
| | - John Amuasi
- Kumasi Centre for Collaborative Research in Tropical Medicine, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana
| | - Nimako Sarpong
- Agogo Presbyterian Hospital, PO Box 27, Agogo, Ashanti Region, Ghana
| | - Augustina Annan
- Kumasi Centre for Collaborative Research in Tropical Medicine, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana
| | - Hsin-Ying Chiang
- Institute of Plant and Microbial Biology, Academia Sinica, 128 Section 2, Academia Road, Nankang, Taipei, 11529, Taiwan
| | - Chih-Horng Kuo
- Institute of Plant and Microbial Biology, Academia Sinica, 128 Section 2, Academia Road, Nankang, Taipei, 11529, Taiwan
| | - Se Eun Park
- Department of Epidemiology, International Vaccine Institute, SNU Research Park, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea
| | - Florian Marks
- Department of Epidemiology, International Vaccine Institute, SNU Research Park, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea
| | - Yaw Adu-Sarkodie
- Department of Clinical Microbiology, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana
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Hellou E, Artul S, Omari S, Taha M, Armaly Z, Nseir W. Non catheter-related bacteremia caused byPseudomonas oryzihabitansin a patient undergoing hemodialysis. Hemodial Int 2014; 18:711-3. [PMID: 24612459 DOI: 10.1111/hdi.12150] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Elias Hellou
- Internal Medicine Department; EMMS Nazareth Hospital; Nazareth Israel
| | - Suheil Artul
- Radiology Department; EMMS Nazareth Hospital; Nazareth Israel
| | - Sohaib Omari
- Internal Medicine Department; EMMS Nazareth Hospital; Nazareth Israel
| | - Mohamad Taha
- Infectious Disease Unit; EMMS Nazareth Hospital; Nazareth Israel
| | - Zaher Armaly
- Nephrology Unit; EMMS Nazareth Hospital; Nazareth Israel
- Faculty of Medicine in the Galilee; Bar-Ilan University; Safed Israel
| | - William Nseir
- Internal Medicine Department; EMMS Nazareth Hospital; Nazareth Israel
- Infectious Disease Unit; EMMS Nazareth Hospital; Nazareth Israel
- Faculty of Medicine in the Galilee; Bar-Ilan University; Safed Israel
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