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Achyuthan KE, Harper JC, Manginell RP, Moorman MW. Volatile Metabolites Emission by In Vivo Microalgae-An Overlooked Opportunity? Metabolites 2017; 7:E39. [PMID: 28788107 PMCID: PMC5618324 DOI: 10.3390/metabo7030039] [Citation(s) in RCA: 49] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2017] [Revised: 07/19/2017] [Accepted: 07/25/2017] [Indexed: 01/04/2023] Open
Abstract
Fragrances and malodors are ubiquitous in the environment, arising from natural and artificial processes, by the generation of volatile organic compounds (VOCs). Although VOCs constitute only a fraction of the metabolites produced by an organism, the detection of VOCs has a broad range of civilian, industrial, military, medical, and national security applications. The VOC metabolic profile of an organism has been referred to as its 'volatilome' (or 'volatome') and the study of volatilome/volatome is characterized as 'volatilomics', a relatively new category in the 'omics' arena. There is considerable literature on VOCs extracted destructively from microalgae for applications such as food, natural products chemistry, and biofuels. VOC emissions from living (in vivo) microalgae too are being increasingly appreciated as potential real-time indicators of the organism's state of health (SoH) along with their contributions to the environment and ecology. This review summarizes VOC emissions from in vivo microalgae; tools and techniques for the collection, storage, transport, detection, and pattern analysis of VOC emissions; linking certain VOCs to biosynthetic/metabolic pathways; and the role of VOCs in microalgae growth, infochemical activities, predator-prey interactions, and general SoH.
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Affiliation(s)
- Komandoor E Achyuthan
- Nano and Microsensors Department, Sandia National Laboratories, Albuquerque, NM 87185, USA.
| | - Jason C Harper
- Bioenergy and Defense Technology Department, Sandia National Laboratories, Albuquerque, NM 87185, USA.
| | - Ronald P Manginell
- Nano and Microsensors Department, Sandia National Laboratories, Albuquerque, NM 87185, USA.
| | - Matthew W Moorman
- Nano and Microsensors Department, Sandia National Laboratories, Albuquerque, NM 87185, USA.
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Vickers CE, Bongers M, Liu Q, Delatte T, Bouwmeester H. Metabolic engineering of volatile isoprenoids in plants and microbes. PLANT, CELL & ENVIRONMENT 2014; 37:1753-75. [PMID: 24588680 DOI: 10.1111/pce.12316] [Citation(s) in RCA: 93] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2014] [Revised: 02/18/2014] [Accepted: 02/18/2014] [Indexed: 05/09/2023]
Abstract
The chemical properties and diversity of volatile isoprenoids lends them to a broad variety of biological roles. It also lends them to a host of biotechnological applications, both by taking advantage of their natural functions and by using them as industrial chemicals/chemical feedstocks. Natural functions include roles as insect attractants and repellents, abiotic stress protectants in pathogen defense, etc. Industrial applications include use as pharmaceuticals, flavours, fragrances, fuels, fuel additives, etc. Here we will examine the ways in which researchers have so far found to exploit volatile isoprenoids using biotechnology. Production and/or modification of volatiles using metabolic engineering in both plants and microorganisms are reviewed, including engineering through both mevalonate and methylerythritol diphosphate pathways. Recent advances are illustrated using several case studies (herbivores and bodyguards, isoprene, and monoterpene production in microbes). Systems and synthetic biology tools with particular utility for metabolic engineering are also reviewed. Finally, we discuss the practical realities of various applications in modern biotechnology, explore possible future applications, and examine the challenges of moving these technologies forward so that they can deliver tangible benefits. While this review focuses on volatile isoprenoids, many of the engineering approaches described here are also applicable to non-isoprenoid volatiles and to non-volatile isoprenoids.
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Affiliation(s)
- Claudia E Vickers
- Australian Institute for Bioengineering and Nanotechnology, The University of Queensland, St Lucia, Queensland, 4072, Australia
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Behnke K, Grote R, Brüggemann N, Zimmer I, Zhou G, Elobeid M, Janz D, Polle A, Schnitzler JP. Isoprene emission-free poplars--a chance to reduce the impact from poplar plantations on the atmosphere. THE NEW PHYTOLOGIST 2012; 194:70-82. [PMID: 22142198 DOI: 10.1111/j.1469-8137.2011.03979.x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
• Depending on the atmospheric composition, isoprene emissions from plants can have a severe impact on air quality and regional climate. For the plant itself, isoprene can enhance stress tolerance and also interfere with the attraction of herbivores and parasitoids. • Here, we tested the growth performance and fitness of Populus × canescens in which isoprene emission had been knocked down by RNA interference technology (PcISPS-RNAi plants) for two growing seasons under outdoor conditions. • Neither the growth nor biomass yield of the PcISPS-RNAi poplars was impaired, and they were even temporarily enhanced compared with control poplars. Modelling of the annual carbon balances revealed a reduced carbon loss of 2.2% of the total gross primary production by the absence of isoprene emission, and a 6.9% enhanced net growth of PcISPS-RNAi poplars. However, the knock down in isoprene emission resulted in reduced susceptibility to fungal infection, whereas the attractiveness for herbivores was enhanced. • The present study promises potential for the use of non- or low-isoprene-emitting poplars for more sustainable and environmentally friendly biomass production, as reducing isoprene emission will presumably have positive effects on regional climate and air quality.
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Affiliation(s)
- Katja Behnke
- Helmholtz Zentrum München, Institute of Biochemical Plant Pathology, Research Unit Environmental Simulation (EUS), Ingolstädter Landstraße 1, D-85764 Neuherberg, Germany
| | - Rüdiger Grote
- Karlsruhe Institute of Technology, Institute of Meteorology and Climate Research (IMK-IFU), Kreuzeckbahnstraße 19, 82467 Garmisch-Partenkirchen, Germany
| | | | - Ina Zimmer
- Helmholtz Zentrum München, Institute of Biochemical Plant Pathology, Research Unit Environmental Simulation (EUS), Ingolstädter Landstraße 1, D-85764 Neuherberg, Germany
| | - Guanwu Zhou
- Forest Botany and Tree Physiology, Büsgen-Institute, Georg-August-University Göttingen, Büsgenweg 2, 37077 Göttingen, Germany
| | - Mudawi Elobeid
- Forest Botany and Tree Physiology, Büsgen-Institute, Georg-August-University Göttingen, Büsgenweg 2, 37077 Göttingen, Germany
| | - Dennis Janz
- Forest Botany and Tree Physiology, Büsgen-Institute, Georg-August-University Göttingen, Büsgenweg 2, 37077 Göttingen, Germany
| | - Andrea Polle
- Forest Botany and Tree Physiology, Büsgen-Institute, Georg-August-University Göttingen, Büsgenweg 2, 37077 Göttingen, Germany
| | - Jörg-Peter Schnitzler
- Helmholtz Zentrum München, Institute of Biochemical Plant Pathology, Research Unit Environmental Simulation (EUS), Ingolstädter Landstraße 1, D-85764 Neuherberg, Germany
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Mumm R, Dicke M. Variation in natural plant products and the attraction of bodyguards involved in indirect plant defenseThe present review is one in the special series of reviews on animal–plant interactions. CAN J ZOOL 2010. [DOI: 10.1139/z10-032] [Citation(s) in RCA: 225] [Impact Index Per Article: 16.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Plants can respond to feeding or egg deposition by herbivorous arthropods by changing the volatile blend that they emit. These herbivore-induced plant volatiles (HIPVs) can attract carnivorous natural enemies of the herbivores, such as parasitoids and predators, a phenomenon that is called indirect plant defense. The volatile blends of infested plants can be very complex, sometimes consisting of hundreds of compounds. Most HIPVs can be classified as terpenoids (e.g., (E)-β-ocimene, (E,E)-α-farnesene, (E)-4,8-dimethyl-1,3,7-nonatriene), green leaf volatiles (e.g., hexanal, (Z)-3-hexen-1-ol, (Z)-3-hexenyl acetate), phenylpropanoids (e.g., methyl salicylate, indole), and sulphur- or nitrogen-containing compounds (e.g., isothiocyanates or nitriles, respectively). One highly intriguing question has been which volatiles out of the complex blend are the most important ones for the carnivorous natural enemies to locate "suitable host plants. Here, we review the methods and techniques that have been used to elucidate the carnivore-attracting compounds. Electrophysiological methods such as electroantennography have been used with parasitoids to elucidate which compounds can be perceived by the antennae. Different types of elicitors and inhibitors have widely been applied to manipulate plant volatile blends. Furthermore, transgenic plants that were genetically modified in specific steps in one of the signal transduction pathways or biosynthetic routes have been used to find steps in HIPV emission crucial for indirect plant defense. Furthermore, we provide an overview on biotic and abiotic factors that influence the emission of HIPVs and how this can affect the interactions between members of different trophic levels. Consequently, we review the progress that has been made in this exciting research field during the past 30 years since the first studies on HIPVs emerged and we highlight important issues to be addressed in the future.
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Affiliation(s)
- Roland Mumm
- Laboratory of Entomology, Wageningen University, 6700 EH Wageningen, the Netherlands
- Plant Research International, Wageningen UR, 6700 PB Wageningen, the Netherlands
- Centre of BioSystems Genomics, 6700AB Wageningen, the Netherlands
| | - Marcel Dicke
- Laboratory of Entomology, Wageningen University, 6700 EH Wageningen, the Netherlands
- Plant Research International, Wageningen UR, 6700 PB Wageningen, the Netherlands
- Centre of BioSystems Genomics, 6700AB Wageningen, the Netherlands
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Laothawornkitkul J, Taylor JE, Paul ND, Hewitt CN. Biogenic volatile organic compounds in the Earth system. THE NEW PHYTOLOGIST 2009; 183:27-51. [PMID: 19422541 DOI: 10.1111/j.1469-8137.2009.02859.x] [Citation(s) in RCA: 183] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Biogenic volatile organic compounds produced by plants are involved in plant growth, development, reproduction and defence. They also function as communication media within plant communities, between plants and between plants and insects. Because of the high chemical reactivity of many of these compounds, coupled with their large mass emission rates from vegetation into the atmosphere, they have significant effects on the chemical composition and physical characteristics of the atmosphere. Hence, biogenic volatile organic compounds mediate the relationship between the biosphere and the atmosphere. Alteration of this relationship by anthropogenically driven changes to the environment, including global climate change, may perturb these interactions and may lead to adverse and hard-to-predict consequences for the Earth system.
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Affiliation(s)
| | - Jane E Taylor
- Lancaster Environment Centre, Lancaster University, Lancaster, LA1 4YQ, UK
| | - Nigel D Paul
- Lancaster Environment Centre, Lancaster University, Lancaster, LA1 4YQ, UK
| | - C Nicholas Hewitt
- Lancaster Environment Centre, Lancaster University, Lancaster, LA1 4YQ, UK
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