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Buscema PM, Grossi E, Massini G, Breda M, Della Torre F. Computer Aided Diagnosis for atrial fibrillation based on new artificial adaptive systems. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2020; 191:105401. [PMID: 32146212 DOI: 10.1016/j.cmpb.2020.105401] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2019] [Revised: 02/03/2020] [Accepted: 02/17/2020] [Indexed: 02/05/2023]
Abstract
BACKGROUND AND OBJECTIVE Atrial fibrillation (AF) is the most common cardiac arrhythmia in clinical practice, having been recognized as a true cardiovascular epidemic. In this paper, a new methodology for Computer Aided Diagnosis of AF based on a special kind of artificial adaptive systems has been developed. METHODS Following the extraction of data from the PhysioNet repository, a new dataset composed of the R/R distances of 73 patients was created. To avoid redundancy, the training set was created by randomly selecting 50% of the subjects from the entire sample, thus making a choice by patient and not by record. The remaining 50% of subjects were randomly split by records in testing and prediction sets. The original ECG data has been transformed according to the following four orders of abstraction: a) sequence of R/R intervals; b) composition of ECG data into a moving window; c) training of different machine learning systems to abstract the function governing the AF; d) fuzzy transformation of Machine learning estimations. In this paper, in parallel with the classic method of windowing, we propose a variant based on a system of progressive moving averages. RESULTS The best performing machine learning, Supervised Contractive Map (SVCm), reached an overall mean accuracy of 95%. SVCm is a new deep neural network based on a different principle than the usual descending gradient. The minimization of the error occurs by means of decomposition into contracted sine functions. CONCLUSIONS In this research, atrial fibrillation is considered from a completely different point of view than classical methods. It is seen as the stable process, i.e. the function, that manages the irregularity of the irregularities of the R/R intervals. The idea, therefore, is to abstract from mere physiology to investigate fibrillation as a mathematical object that handles irregularities. The attained results seem to open new perspectives for the use of potent artificial adaptive systems for the automatic detection of atrial fibrillation, with accuracy rates extremely promising for real world applications.
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Affiliation(s)
- Paolo Massimo Buscema
- Semeion Research Center of Sciences of Communication, via Sersale, 117, 00128 Rome, Italy; University of Colorado at Denver, Dept. Mathematical and Statistical Sciences, Denver, CO, USA.
| | - Enzo Grossi
- Semeion Research Center of Sciences of Communication, via Sersale, 117, 00128 Rome, Italy
| | - Giulia Massini
- Semeion Research Center of Sciences of Communication, via Sersale, 117, 00128 Rome, Italy
| | - Marco Breda
- Semeion Research Center of Sciences of Communication, via Sersale, 117, 00128 Rome, Italy
| | - Francesca Della Torre
- Semeion Research Center of Sciences of Communication, via Sersale, 117, 00128 Rome, Italy
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Nomura Y, Nemoto M, Hayashi N, Hanaoka S, Murata M, Yoshikawa T, Masutani Y, Maeda E, Abe O, Tanaka HKM. Pilot study of eruption forecasting with muography using convolutional neural network. Sci Rep 2020; 10:5272. [PMID: 32210328 PMCID: PMC7093437 DOI: 10.1038/s41598-020-62342-y] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Accepted: 03/06/2020] [Indexed: 11/25/2022] Open
Abstract
Muography is a novel method of visualizing the internal structures of active volcanoes by using high-energy near-horizontally arriving cosmic muons. The purpose of this study is to show the feasibility of muography to forecast the eruption event with the aid of the convolutional neural network (CNN). In this study, seven daily consecutive muographic images were fed into the CNN to compute the probability of eruptions on the eighth day, and our CNN model was trained by hyperparameter tuning with the Bayesian optimization algorithm. By using the data acquired in Sakurajima volcano, Japan, as an example, the forecasting performance achieved a value of 0.726 for the area under the receiver operating characteristic curve, showing the reasonable correlation between the muographic images and eruption events. Our result suggests that muography has the potential for eruption forecasting of volcanoes.
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Affiliation(s)
- Yukihiro Nomura
- Department of Computational Diagnostic Radiology and Preventive Medicine, The University of Tokyo Hospital, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8655, Japan.
| | - Mitsutaka Nemoto
- Faculty of Biology-Oriented Science and Technology, Kindai University, Nishimitani 930, Kinokawa, Wakayama, 649-6493, Japan
| | - Naoto Hayashi
- Department of Computational Diagnostic Radiology and Preventive Medicine, The University of Tokyo Hospital, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8655, Japan
| | - Shouhei Hanaoka
- Department of Radiology, The University of Tokyo Hospital, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8655, Japan
| | - Masaki Murata
- Department of Management, Japan University of Economics, 3-11-25 Gojo, Dazaifu-shi, Fukuoka, 818-0197, Japan
| | - Takeharu Yoshikawa
- Department of Computational Diagnostic Radiology and Preventive Medicine, The University of Tokyo Hospital, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8655, Japan
| | - Yoshitaka Masutani
- Graduate School of Information Sciences, Hiroshima City University, 3-4-1 Ozuka-Higashi, Asaminami-ku, Hiroshima, 731-3194, Japan
| | - Eriko Maeda
- Department of Computational Diagnostic Radiology and Preventive Medicine, The University of Tokyo Hospital, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8655, Japan
| | - Osamu Abe
- Department of Radiology, The University of Tokyo Hospital, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8655, Japan
| | - Hiroyuki K M Tanaka
- Earthquake Research Institute, The University of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo, 113-0032, Japan
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