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Kassa T. A Review on Human Orf: A Neglected Viral Zoonosis. Res Rep Trop Med 2021; 12:153-172. [PMID: 34267574 PMCID: PMC8275206 DOI: 10.2147/rrtm.s306446] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2021] [Accepted: 06/04/2021] [Indexed: 12/30/2022] Open
Abstract
Orf virus (ORFV) is the etiologic agent of Orf or ecthyma contagiosum in humans but primarily affects different domestic and wild animals. The disease mostly affects sheep, goats and other small wild ruminants and spreads to humans through direct contact with infected animals or by way of contaminated fomites worldwide. ORFV is taxonomically classified as a member of the genus Parapoxvirus. It is known to have tolerance to inactivation in a drier environment, and it has been recovered from crusts after several months to years. Among immunocompetent people, the lesions usually resolve by its natural course within a maximum of 8 weeks. In immunosuppressed patients, however, it needs the use of various approaches including antiviral, immune modifier or minor surgical excisions. The virus through its association with divergent host ranges helps to develop a mechanism to evade the immune system. The relative emergence of Orf, diagnosed on clinical ground among human cases, in unusual frequencies in southwest Ethiopia between October 2019 and May 2020, was the driver to write this review. The objective was to increase health care providers' diagnostic curiosity and to bring the attentiveness of public health advisors for prevention, control and the development of schemes for surveillance of Orf zoonosis in a similar setting like Ethiopia.
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Affiliation(s)
- Tesfaye Kassa
- School of Medical Laboratory Science, Institute of Health, Jimma University, Jimma, Ethiopia
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Khmaladze E, Mauldin MR, Tsaguria D, Gavashelidze M, Sidamonidze K, Tevdoradze T, Li Y, Reynolds MG, Imnadze P, Nakazawa Y. Geographic distribution and genetic characterization of poxviruses from human infections in Georgia, 2009-2014. Arch Virol 2021; 166:1729-1733. [PMID: 33745070 PMCID: PMC8163666 DOI: 10.1007/s00705-020-04922-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 11/05/2020] [Indexed: 11/27/2022]
Abstract
Anthrax is endemic in Georgia, as are multiple zoonotic poxviruses. Poxvirus-associated infections share some clinical manifestations and exposure risks with anthrax, and so it is important to distinguish between the two. With this in mind, an archived collection of anthrax-negative DNA samples was retrospectively screened for poxviruses, and of the 148 human samples tested, 64 were positive. Sequence analysis confirmed the presence of orf virus, bovine papular stomatitis virus, and pseudocowpox virus. This study provides evidence of previously unrecognized poxvirus infections in Georgia and highlights the benefit of the timely identification of such infections by improving laboratory capacity.
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Affiliation(s)
- Ekaterine Khmaladze
- Department of Virology, Molecular Biology and Genome Research, R. G. Lugar Center for Public Health Research, The National Center for Disease Control and Public Health (NCDC) of Georgia, Tbilisi, Georgia.
| | - Matthew R Mauldin
- Poxvirus and Rabies Branch, Division of High-Consequence Pathogens and Pathology, US Centers for Disease Control and Prevention, Atlanta, USA
| | - Davit Tsaguria
- Department of Virology, Molecular Biology and Genome Research, R. G. Lugar Center for Public Health Research, The National Center for Disease Control and Public Health (NCDC) of Georgia, Tbilisi, Georgia
| | - Mari Gavashelidze
- Department of Virology, Molecular Biology and Genome Research, R. G. Lugar Center for Public Health Research, The National Center for Disease Control and Public Health (NCDC) of Georgia, Tbilisi, Georgia
| | - Ketevan Sidamonidze
- Department of Virology, Molecular Biology and Genome Research, R. G. Lugar Center for Public Health Research, The National Center for Disease Control and Public Health (NCDC) of Georgia, Tbilisi, Georgia
| | - Tea Tevdoradze
- Department of Virology, Molecular Biology and Genome Research, R. G. Lugar Center for Public Health Research, The National Center for Disease Control and Public Health (NCDC) of Georgia, Tbilisi, Georgia
| | - Yu Li
- Poxvirus and Rabies Branch, Division of High-Consequence Pathogens and Pathology, US Centers for Disease Control and Prevention, Atlanta, USA
| | - Mary G Reynolds
- Poxvirus and Rabies Branch, Division of High-Consequence Pathogens and Pathology, US Centers for Disease Control and Prevention, Atlanta, USA
| | - Paata Imnadze
- Department of Virology, Molecular Biology and Genome Research, R. G. Lugar Center for Public Health Research, The National Center for Disease Control and Public Health (NCDC) of Georgia, Tbilisi, Georgia
| | - Yoshinori Nakazawa
- Poxvirus and Rabies Branch, Division of High-Consequence Pathogens and Pathology, US Centers for Disease Control and Prevention, Atlanta, USA
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Yao X, Pang M, Wang T, Chen X, Tang X, Chang J, Chen D, Ma W. Genomic Features and Evolution of the Parapoxvirus during the Past Two Decades. Pathogens 2020; 9:E888. [PMID: 33120928 PMCID: PMC7694016 DOI: 10.3390/pathogens9110888] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2020] [Revised: 10/21/2020] [Accepted: 10/24/2020] [Indexed: 11/23/2022] Open
Abstract
Parapoxvirus (PPV) has been identified in some mammals and poses a great threat to both the livestock production and public health. However, the prevalence and evolution of this virus are still not fully understood. Here, we performed an in silico analysis to investigate the genomic features and evolution of PPVs. We noticed that although there were significant differences of GC contents between orf virus (ORFV) and other three species of PPVs, all PPVs showed almost identical nucleotide bias, that is GC richness. The structural analysis of PPV genomes showed the divergence of different PPV species, which may be due to the specific adaptation to their natural hosts. Additionally, we estimated the phylogenetic diversity of seven different genes of PPV. According to all available sequences, our results suggested that during 2010-2018, ORFV was the dominant virus species under the selective pressure of the optimal gene patterns. Furthermore, we found the substitution rates ranged from 3.56 × 10-5 to 4.21 × 10-4 in different PPV segments, and the PPV VIR gene evolved at the highest substitution rate. In these seven protein-coding regions, purifying selection was the major evolutionary pressure, while the GIF and VIR genes suffered the greatest positive selection pressure. These results may provide useful knowledge on the virus genetic evolution from a new perspective which could help to create prevention and control strategies.
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Affiliation(s)
- Xiaoting Yao
- College of Veterinary Medicine, Northwest A&F University, Yangling 712100, China; (X.Y.); (M.P.); (T.W.); (X.C.); (X.T.)
| | - Ming Pang
- College of Veterinary Medicine, Northwest A&F University, Yangling 712100, China; (X.Y.); (M.P.); (T.W.); (X.C.); (X.T.)
| | - Tianxing Wang
- College of Veterinary Medicine, Northwest A&F University, Yangling 712100, China; (X.Y.); (M.P.); (T.W.); (X.C.); (X.T.)
| | - Xi Chen
- College of Veterinary Medicine, Northwest A&F University, Yangling 712100, China; (X.Y.); (M.P.); (T.W.); (X.C.); (X.T.)
| | - Xidian Tang
- College of Veterinary Medicine, Northwest A&F University, Yangling 712100, China; (X.Y.); (M.P.); (T.W.); (X.C.); (X.T.)
| | - Jianjun Chang
- College of Agriculture and Animal Husbandry, Qinghai University, Xining 810016, China;
- State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining 810016, China
| | - Dekun Chen
- College of Veterinary Medicine, Northwest A&F University, Yangling 712100, China; (X.Y.); (M.P.); (T.W.); (X.C.); (X.T.)
| | - Wentao Ma
- College of Veterinary Medicine, Northwest A&F University, Yangling 712100, China; (X.Y.); (M.P.); (T.W.); (X.C.); (X.T.)
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