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Brand TS, van der Westhuyzen JP, Hough W, van Zyl JHC. Application of growth models to South African Boer goat castrates and does under feedlot conditions. Trop Anim Health Prod 2024; 56:178. [PMID: 38806999 PMCID: PMC11133175 DOI: 10.1007/s11250-024-03973-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2023] [Accepted: 03/28/2024] [Indexed: 05/30/2024]
Abstract
Mathematical models may aid researchers in describing biological processes, like growth, in animals. This study aimed to collect the body weight data of 18 Boer goat castrates and 20 Boer goat does, from birth until maturity, to model growth and determine growth trends. This is a novel investigation as sufficient information on an age-weight database for these two Boer goat sexes from birth to maturity, is lacking. Using age-weight data, four nonlinear models, namely the Brody, Gompertz, Logistic and Von Bertalanffy growth models, were plotted and evaluated. The model parameters of each growth model were compared for differences between the two sexes. The statistical effectiveness of fit was determined for each model using AIC and RMSE, with R2 also being considered. All models except the Brody model, predicted significantly heavier mature weights for castrates. The Brody model was deemed unfit to describe Boer goat growth as the function severely over-predict weights from birth until maturity for both sexes. The Von Bertalanffy (R2 = 91.3) and Gompertz functions (R2 = 91.3) showed the best fit for Boer goat castrates, while the Gompertz model (R2 = 95.1) showed the best fit for Boer goat does. The Gompertz function is the preferred model to depict Boer goat growth overall, as it accurately characterized growth of both sexes. According to the Gompertz model the age at which the inflection point of the growth curve was reached, did not differ significantly between castrates and does (141.80 days versus 136.31 days). There was also no significant difference in maturation rate between the two sexes.
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Affiliation(s)
- T S Brand
- Department of Animal Sciences, Stellenbosch University, Private Bag X1, Matieland, Stellenbosch, 7602, South Africa.
- Directorate: Animal Sciences, Department of Agriculture, Western Cape Government, Private Bag X1, Elsenburg, 7607, South Africa.
| | - J P van der Westhuyzen
- Department of Animal Sciences, Stellenbosch University, Private Bag X1, Matieland, Stellenbosch, 7602, South Africa
| | - W Hough
- Department of Animal Sciences, Stellenbosch University, Private Bag X1, Matieland, Stellenbosch, 7602, South Africa
| | - J H C van Zyl
- Department of Animal Sciences, Stellenbosch University, Private Bag X1, Matieland, Stellenbosch, 7602, South Africa
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Neysi S, Ghaderi-Zefrehei M, Rafeie F, Dolatabady MM, Elahi Torshizi M, Zakizadeh S, Smith J. Estimation of genetic parameters for production, reproduction, and growth curve of Fars indigenous chicken. Anim Sci J 2023; 94:e13808. [PMID: 36653884 DOI: 10.1111/asj.13808] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Revised: 12/08/2022] [Accepted: 12/22/2022] [Indexed: 01/20/2023]
Abstract
Iranian native chicken, including Fars indigenous chicken, is an important genetic resource due to its adaptation to stressful environmental conditions, good endurance and resistance to disease. The aim of this research was to determine the genetic infrastructure of Fars indigenous chicken using several nonlinear functions. The dataset included body weight at hatch (BW1), body weight at the 8th week (BW8), body weight at the 12th week (BW12), weight at sexual maturity (WSM), age at sexual maturity (ASM), number of eggs in the first 12 weeks of laying period (EN), egg weight at the first day of laying (EW1), average egg weight at the 28thday of laying (EW28), and average egg weight at weeks 28, 30, and 32 of the laying period (AEW). Growth models were fitted using the NLIN procedure and WOMBAT software was used to predict variance components for the best fit model parameters. Results suggested three-parameter models, for example, Gompertz, fitted better to the data than others. The maturity weight (A), initial weight (B), and maturity rate (K) parameters in the Gompertz model were 1996.8 ± 6.63, 4.11 ± 0.03, and 0.021 ± 0.0001, respectively. The heritability of A, B, and K parameters were 0.03, 0.05, and 0.12, respectively.
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Affiliation(s)
- Saeid Neysi
- Department of Animal Science, Animal Science and Food Technology Faculty, Agricultural Sciences and Natural Resources University of Khuzestan, Mollasani, Iran
| | | | - Farjad Rafeie
- Department of Agricultural Biotechnology, Faculty of Agricultural Sciences, University of Guilan, Rasht, Iran
| | | | - Mahdi Elahi Torshizi
- Department of Animal Science, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - Sonia Zakizadeh
- Animal Science Research Institute of Iran (ASRII), Agriculture Research, Education and Extension Organization (AREEO), Karaj, Iran
| | - Jacqueline Smith
- The Roslin Institute, University of Edinburgh-Easter Bush Campus, Edinburgh, UK
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KÜÇÜKTOPCU E, CEMEK B. Comparative Analysis of Artificial Intelligence and Nonlinear Models for Broiler Growth Curve. ULUSLARARASI TARIM VE YABAN HAYATI BILIMLERI DERGISI 2021. [DOI: 10.24180/ijaws.990297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
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González Ariza A, Arando Arbulu A, Navas González FJ, Nogales Baena S, Delgado Bermejo JV, Camacho Vallejo ME. The Study of Growth and Performance in Local Chicken Breeds and Varieties: A Review of Methods and Scientific Transference. Animals (Basel) 2021; 11:2492. [PMID: 34573456 PMCID: PMC8466095 DOI: 10.3390/ani11092492] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2021] [Revised: 08/23/2021] [Accepted: 08/23/2021] [Indexed: 12/20/2022] Open
Abstract
A review of the scientific advances in the study of the growth and performance in native chicken breeds and varieties over the past 20 years was performed. Understanding the growth patterns of native breeds can only be achieved if the constraints characterizing these populations are considered and treated accordingly. Contextually, the determination of researchers to use the same research methods and study designs applied in international commercial poultry populations conditions the accuracy of the model, variability capturing ability, and the observational or predictive performance when the data of the local population are fitted. Highly skewed sex ratios favouring females, an inappropriate census imbalance compensation and a lack of population structure render models that are regularly deemed effective as invalid to issue solid and sound conclusions. The wider the breed diversity is in a country, the higher the scientific attention paid to these populations. A detailed discussion of the most appropriate models and underlying reasons for their suitability and the reasons preventing the use of others in these populations is provided. Furthermore, the factors conditioning the scientific reception and impact of related publications used to transfer these results to the broad scientific public were evaluated to serve as guidance for the maximization of the success and dissemination of local breed information.
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Affiliation(s)
- Antonio González Ariza
- Department of Genetics, Faculty of Veterinary Medicine, University of Cordoba, 14014 Cordoba, Spain; (A.G.A.); (A.A.A.); (S.N.B.); (J.V.D.B.)
| | - Ander Arando Arbulu
- Department of Genetics, Faculty of Veterinary Medicine, University of Cordoba, 14014 Cordoba, Spain; (A.G.A.); (A.A.A.); (S.N.B.); (J.V.D.B.)
- Animal Breeding Consulting, S.L., University of Cordoba, 14014 Cordoba, Spain
| | - Francisco Javier Navas González
- Department of Genetics, Faculty of Veterinary Medicine, University of Cordoba, 14014 Cordoba, Spain; (A.G.A.); (A.A.A.); (S.N.B.); (J.V.D.B.)
- Institute of Agricultural Research and Training (IFAPA), 14004 Córdoba, Spain;
| | - Sergio Nogales Baena
- Department of Genetics, Faculty of Veterinary Medicine, University of Cordoba, 14014 Cordoba, Spain; (A.G.A.); (A.A.A.); (S.N.B.); (J.V.D.B.)
| | - Juan Vicente Delgado Bermejo
- Department of Genetics, Faculty of Veterinary Medicine, University of Cordoba, 14014 Cordoba, Spain; (A.G.A.); (A.A.A.); (S.N.B.); (J.V.D.B.)
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Quantitative trait loci for growth-related traits in Japanese quail (Coturnix japonica) using restriction-site associated DNA sequencing. Mol Genet Genomics 2021; 296:1147-1159. [PMID: 34251529 DOI: 10.1007/s00438-021-01806-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Accepted: 06/16/2021] [Indexed: 10/20/2022]
Abstract
This study aimed to identify quantitative trait loci (QTLs) for growth-related traits by constructing a genetic linkage map based on single nucleotide polymorphism (SNP) markers in Japanese quail. A QTL mapping population of 277 F2 birds was obtained from an intercross between a male of a large-sized strain and three females of a normal-sized strain. Body weight (BW) was measured weekly from hatching to 16 weeks of age. Non-linear regression growth models of Weibull, Logistic, Gompertz, Richards, and Brody were analyzed, and growth curve parameters of Richards was selected as the best model to describe the quail growth curve of the F2 birds. Restriction-site associated DNA sequencing developed 125 SNP markers that were informative between their parental strains. The SNP markers were distributed on 16 linkage groups that spanned 795.9 centiMorgan (cM) with an average marker interval of 7.3 cM. QTL analysis of phenotypic traits revealed four main-effect QTLs. Detected QTLs were located on chromosomes 1 and 3 and were associated with BW from 4 to 16 weeks of age and asymptotic weight of Richards model at genome-wide significant at 1% or 5% level. No QTL was detected for BW from 0 to 3 weeks of age. This is the first report identified QTLs for asymptotic weight of the Richards parameter in Japanese quail. These results highlight that the combination of QTL studies and the RAD-seq method will aid future breeding programs identify genes underlying the QTL and the application of marker-assisted selection in the poultry industry, particularly the Japanese quail.
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Abdelsattar M, Zhuang Y, Cui K, Bi Y, Zhang N. Predicting the Digestive Tract Development and Growth Performance of Goat Kids Using Sigmoidal Models. Animals (Basel) 2021; 11:757. [PMID: 33801818 PMCID: PMC8001751 DOI: 10.3390/ani11030757] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2021] [Revised: 02/24/2021] [Accepted: 03/03/2021] [Indexed: 11/16/2022] Open
Abstract
The transition from monogastric to rumination stage is crucial in ruminants' growth to avoid stressors-weaning and neonatal mortalities. Poor growth of the digestive tract could adversely affect the performance of the animal. Modeling informative growth curves is of great importance for a better understanding of the effective development pattern, in order to optimize feeding management system, and to achieve more production efficiency. However, little is known about the digestive tract growth curves. For this reason, one big goat farm of Laiwu black breed was chosen as a basis of this study. Forty-eight kids belonging to eight-time points (1, 7, 14, 28, 42, 56, 70, and 84 d; 6 kids for each) were selected and slaughtered. The body weight, body size indices, rumen pH, and stomach parts were determined and fitted to the polynomial and sigmoidal models. In terms of goodness of fit criteria, the Gompertz model was the best model for body weight, body oblique length, tube, and rumen weight. Moreover, the Logistic model was the best model for carcass weight, body height, and chest circumference. In addition, the Quadratic model showed the best fit for dressing percentage, omasum weight, abomasum weight, and rumen volume. Moreover, the cubic model best fitted the ruminal pH and reticulum percentage. The Weibull model was the best model for the reticulum weight and omasum percentage, while the MMF model was the best model describing the growth of chest depth, rumen percentage, and abomasum percentage. The model parameters, R squared, inflection points, area under curve varied among the different dependent variables. The Pearson correlation showed that the digestive tract development was more correlated with age than body weight, but the other variables were more correlated with body weight than age. The study demonstrated the use of empirical sigmoidal and polynomial models to predict growth rates of the digestive tract at relevant age efficiently.
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Affiliation(s)
- Mahmoud Abdelsattar
- Key Laboratory of Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (M.A.); (Y.Z.); (K.C.); (Y.B.)
- Department of Animal and Poultry Production, Faculty of Agriculture, South Valley University, 83523 Qena, Egypt
| | - Yimin Zhuang
- Key Laboratory of Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (M.A.); (Y.Z.); (K.C.); (Y.B.)
| | - Kai Cui
- Key Laboratory of Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (M.A.); (Y.Z.); (K.C.); (Y.B.)
| | - Yanliang Bi
- Key Laboratory of Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (M.A.); (Y.Z.); (K.C.); (Y.B.)
| | - Naifeng Zhang
- Key Laboratory of Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (M.A.); (Y.Z.); (K.C.); (Y.B.)
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Do DN, Miar Y. Evaluation of Growth Curve Models for Body Weight in American Mink. Animals (Basel) 2019; 10:ani10010022. [PMID: 31877627 PMCID: PMC7023449 DOI: 10.3390/ani10010022] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2019] [Revised: 12/04/2019] [Accepted: 12/17/2019] [Indexed: 01/26/2023] Open
Abstract
Modelling the growth curves of animals is important for optimizing the management and efficiency of animal production; however, little is known about the growth curves in American mink (Neovison vison). The study evaluated the performances of four three-parameter (Logistic, Gompertz, von Bertalanffy, and Brody), four four-parameter (Richards, Weibull, Bridges, and Janoscheck) and two polynomial models for describing the growth curves in mink. Body weights were collected from the third week of life to the week 31 in 738 black mink (373 males and 365 females). Models were fitted using the nls and nlsLM functions in stats and minpack.lm packages in R software, respectively. The Akaike's information criterion (AIC) and Bayesian information criterion (BIC) were used for model comparison. Based on these criteria, Logistic and Richards were the best models for males and females, respectively. Four-parameter models had better performance compared to the other models, except Logistic model. The estimated maximum weight and mature growth rate varied among the models and differed between males and females. The results indicated that males and females had different growth curves as males grew faster and reached to the maximum body weight later compared to females. Further studies on genetic parameters and selection response for growth curve parameters are required for development of selection programs based on the shape of growth curves in mink.
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Modelling Growth Curves in a Nondescript Italian Chicken Breed: an Opportunity to Improve Genetic and Feeding Strategies. J Poult Sci 2015. [DOI: 10.2141/jpsa.0150048] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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