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Domarkienė I, Ambrozaitytė L, Bukauskas L, Rančelis T, Sütterlin S, Knox BJ, Maennel K, Maennel O, Parish K, Lugo RG, Brilingaitė A. CyberGenomics: Application of Behavioral Genetics in Cybersecurity. Behav Sci (Basel) 2021; 11:bs11110152. [PMID: 34821613 PMCID: PMC8614761 DOI: 10.3390/bs11110152] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2021] [Revised: 10/21/2021] [Accepted: 10/29/2021] [Indexed: 11/19/2022] Open
Abstract
Cybersecurity (CS) is a contemporary field for research and applied study of a range of aspects from across multiple disciplines. A cybersecurity expert has an in-depth knowledge of technology but is often also recognized for the ability to view technology in a non-standard way. This paper explores how CS specialists are both a combination of professional computing-based skills and genetically encoded traits. Almost every human behavioral trait is a result of many genome variants in action altogether with environmental factors. The review focuses on contextualizing the behavior genetics aspects in the application of cybersecurity. It reconsiders methods that help to identify aspects of human behavior from the genetic information. And stress is an illustrative factor to start the discussion within the community on what methodology should be used in an ethical way to approach those questions. CS positions are considered stressful due to the complexity of the domain and the social impact it can have in cases of failure. An individual risk profile could be created combining known genome variants linked to a trait of particular behavior using a special biostatistical approach such as a polygenic score. These revised advancements bring challenging possibilities in the applications of human behavior genetics and CS.
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Affiliation(s)
- Ingrida Domarkienė
- Department of Human and Medical Genetics, Institute of Biomedical Sciences, Faculty of Medicine, Vilnius University, LT-08661 Vilnius, Lithuania; (L.A.); (T.R.)
- Correspondence: ; Tel.: +370-(5)-2501788
| | - Laima Ambrozaitytė
- Department of Human and Medical Genetics, Institute of Biomedical Sciences, Faculty of Medicine, Vilnius University, LT-08661 Vilnius, Lithuania; (L.A.); (T.R.)
| | - Linas Bukauskas
- Cybersecurity Laboratory, Institute of Computer Science, Vilnius University, LT-08303 Vilnius, Lithuania; (L.B.); (A.B.)
| | - Tautvydas Rančelis
- Department of Human and Medical Genetics, Institute of Biomedical Sciences, Faculty of Medicine, Vilnius University, LT-08661 Vilnius, Lithuania; (L.A.); (T.R.)
| | - Stefan Sütterlin
- Faculty of Health, Welfare and Organisation, Østfold University College, NO-1757 Halden, Norway; (S.S.); (B.J.K.); (R.G.L.)
- Centre for Digital Forensics and Cyber Security, Tallinn University of Technology, EE-19086 Tallinn, Estonia; (K.M.); (O.M.)
| | - Benjamin James Knox
- Faculty of Health, Welfare and Organisation, Østfold University College, NO-1757 Halden, Norway; (S.S.); (B.J.K.); (R.G.L.)
- Centre for Digital Forensics and Cyber Security, Tallinn University of Technology, EE-19086 Tallinn, Estonia; (K.M.); (O.M.)
- Department of Information Security and Communication Technology, Norwegian University of Science and Technology (NTNU), NO-2802 Gjøvik, Norway;
| | - Kaie Maennel
- Centre for Digital Forensics and Cyber Security, Tallinn University of Technology, EE-19086 Tallinn, Estonia; (K.M.); (O.M.)
| | - Olaf Maennel
- Centre for Digital Forensics and Cyber Security, Tallinn University of Technology, EE-19086 Tallinn, Estonia; (K.M.); (O.M.)
| | - Karen Parish
- Department of Information Security and Communication Technology, Norwegian University of Science and Technology (NTNU), NO-2802 Gjøvik, Norway;
| | - Ricardo Gregorio Lugo
- Faculty of Health, Welfare and Organisation, Østfold University College, NO-1757 Halden, Norway; (S.S.); (B.J.K.); (R.G.L.)
- Center for Cyber and Information Security, Norwegian University of Science and Technology (NTNU), NO-2802 Gjøvik, Norway
| | - Agnė Brilingaitė
- Cybersecurity Laboratory, Institute of Computer Science, Vilnius University, LT-08303 Vilnius, Lithuania; (L.B.); (A.B.)
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Gajaweera C, Kang JM, Lee DH, Lee SH, Kim YK, Wijayananda HI, Kim JJ, Ha JH, Choi BH, Lee SH. Genetic diversity and population structure of the Sapsaree, a native Korean dog breed. BMC Genet 2019; 20:66. [PMID: 31382890 PMCID: PMC6683530 DOI: 10.1186/s12863-019-0757-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2018] [Accepted: 06/20/2019] [Indexed: 01/14/2023] Open
Abstract
BACKGROUND The Sapsaree is a breed of dog (Canis familiaris) native to Korea, which became perilously close to extinction in the mid-1980s. However, with systematic genetic conservation and restoration efforts, this breed was rescued from extinction and population sizes have been gradually increasing over the past few decades. The aim of this study was to ascertain novel information about the genetic diversity, population structure, and demographic history of the Sapsaree breed using genome-wide single nucleotide polymorphism data. We characterized the genetic profile of the Sapsaree breed by comparison with seven foreign dog breeds with similar morphologies to estimate genetic differentiation within and among these breeds. RESULTS The results suggest that Sapsarees have higher genetic variance compared with the other breeds analyzed. The majority of the Sapsarees in this study share a discrete genetic pattern, although some individuals were slightly different, possibly as a consequence of the recent restoration process. Concordant results from analyses of linkage disequilibrium, effective population size, genetic diversity, and population structural analyses illustrate a relationship among the Sapsaree and the Tibetan breeds Tibetan terrier and Lhasa Apso, and a small genetic introgression from European breeds. The effective population size of the Sapsaree has contracted dramatically over the past generations, and is currently insufficient to maintain long-term viability of the breed's genetic diversity. CONCLUSIONS This study provides novel insights regarding the genetic diversity and population structure of the native Korean dog breed Sapsaree. Our results suggest the importance of a strategic and systematic approach to ensure the genetic diversity and the authenticity of the Sapsaree breed.
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Affiliation(s)
- Chandima Gajaweera
- Division of Animal & Dairy Science, Chungnam National University, Daejeon, 34134 Republic of Korea
- Department of Animal Science, Faculty of Agriculture, University of Ruhuna, Matara, Sri Lanka
| | - Ji Min Kang
- Division of Animal & Dairy Science, Chungnam National University, Daejeon, 34134 Republic of Korea
| | - Doo Ho Lee
- Division of Animal & Dairy Science, Chungnam National University, Daejeon, 34134 Republic of Korea
| | - Soo Hyun Lee
- Division of Animal & Dairy Science, Chungnam National University, Daejeon, 34134 Republic of Korea
| | - Yeong Kuk Kim
- Division of Animal & Dairy Science, Chungnam National University, Daejeon, 34134 Republic of Korea
| | - Hasini I. Wijayananda
- Division of Animal & Dairy Science, Chungnam National University, Daejeon, 34134 Republic of Korea
| | - Jong Joo Kim
- School of Biotechnology, Yeungnam University, Gyeongsan, 712-749 Republic of Korea
| | - Ji Hong Ha
- School of Life Science, Kyungpook National University, Daegu, 41940 Republic of Korea
| | - Bong Hwan Choi
- Animal Genomics & Bioinformatics Division, National Institute of Animal Science, RDA, Wanju, 55365 Republic of Korea
| | - Seung Hwan Lee
- Division of Animal & Dairy Science, Chungnam National University, Daejeon, 34134 Republic of Korea
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Zapata I, Serpell JA, Alvarez CE. Genetic mapping of canine fear and aggression. BMC Genomics 2016; 17:572. [PMID: 27503363 PMCID: PMC4977763 DOI: 10.1186/s12864-016-2936-3] [Citation(s) in RCA: 83] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2016] [Accepted: 07/13/2016] [Indexed: 01/22/2023] Open
Abstract
BACKGROUND Fear/anxiety and anger/aggression greatly influence health, quality of life and social interactions. They are a huge burden to wellbeing, and personal and public economics. However, while much is known about the physiology and neuroanatomy of such emotions, little is known about their genetics - most importantly, why some individuals are more susceptible to pathology under stress. RESULTS We conducted genomewide association (GWA) mapping of breed stereotypes for many fear and aggression traits across several hundred dogs from diverse breeds. We confirmed those findings using GWA in a second cohort of partially overlapping breeds. Lastly, we used the validated loci to create a model that effectively predicted fear and aggression stereotypes in a third group of dog breeds that were not involved in the mapping studies. We found that i) known IGF1 and HMGA2 loci variants for small body size are associated with separation anxiety, touch-sensitivity, owner directed aggression and dog rivalry; and ii) two loci, between GNAT3 and CD36 on chr18, and near IGSF1 on chrX, are associated with several traits, including touch-sensitivity, non-social fear, and fear and aggression that are directed toward unfamiliar dogs and humans. All four genome loci are among the most highly evolutionarily-selected in dogs, and each of those was previously shown to be associated with morphological traits. We propose that the IGF1 and HMGA2 loci are candidates for identical variation being associated with both behavior and morphology. In contrast, we show that the GNAT3-CD36 locus has distinct variants for behavior and morphology. The chrX region is a special case due to its extensive linkage disequilibrium (LD). Our evidence strongly suggests that sociability (which we propose is associated with HS6ST2) and fear/aggression are two distinct GWA loci within this LD block on chrX, but there is almost perfect LD between the peaks for fear/aggression and animal size. CONCLUSIONS We have mapped many canine fear and aggression traits to single haplotypes at the GNAT3-CD36 and IGSF1 loci. CD36 is widely expressed, but areas of the amygdala and hypothalamus are among the brain regions with highest enrichment; and CD36-knockout mice are known to have significantly increased anxiety and aggression. Both of the other genes have very high tissue-specificity and are very abundantly expressed in brain regions that comprise the core anatomy of fear and aggression - the amygdala to hypothalamic-pituitary-adrenal (HPA) axis. We propose that reduced-fear variants at these loci may have been involved in the domestication process.
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Affiliation(s)
- Isain Zapata
- Center for Molecular and Human Genetics, The Research Institute at Nationwide Children’s Hospital, Columbus, OH 43205 USA
| | - James A. Serpell
- Center for the Interaction of Animals and Society, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA 19104 USA
| | - Carlos E. Alvarez
- Center for Molecular and Human Genetics, The Research Institute at Nationwide Children’s Hospital, Columbus, OH 43205 USA
- Department of Pediatrics, The Ohio State University College of Medicine, Columbus, OH 43210 USA
- Department of Veterinary Clinical Sciences, The Ohio State University College of Veterinary Medicine, Columbus, OH 43210 USA
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Kim JE, Choe J, Lee JH, Kim WB, Cho W, Ha JH, Kwon KJ, Han KI, Jo SH. Whole-transcriptome analyses of the Sapsaree, a Korean natural monument, before and after exercise-induced stress. JOURNAL OF ANIMAL SCIENCE AND TECHNOLOGY 2016; 58:17. [PMID: 27087983 PMCID: PMC4832554 DOI: 10.1186/s40781-016-0097-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/04/2015] [Accepted: 03/29/2016] [Indexed: 01/17/2023]
Abstract
BACKGROUND The Sapsaree (Canis familiaris) is a Korean native dog that is very friendly, protective, and loyal to its owner, and is registered as a natural monument in Korea (number: 368). To investigate large-scale gene expression profiles and identify the genes related to exercise-induced stress in the Sapsaree, we performed whole-transcriptome RNA sequencing and analyzed gene expression patterns before and after exercise performance. RESULTS We identified 525 differentially expressed genes in ten dogs before and after exercise. Gene Ontology classification and KEGG pathway analysis revealed that the genes were mainly involved in metabolic processes, such as programmed cell death, protein metabolic process, phosphatidylinositol signaling system, and cation binding in cytoplasm. The ten Sapsarees could be divided into two groups based on the gene expression patterns before and after exercise. The two groups were significantly different in terms of their basic body type (p ≤ 0.05). Seven representative genes with significantly different expression patterns before and after exercise between the two groups were chosen and characterized. CONCLUSIONS Body type had a significant effect on the patterns of differential gene expression induced by exercise. Whole-transcriptome sequencing is a useful method for investigating the biological characteristics of the Sapsaree and the large-scale genomic differences of canines in general.
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Affiliation(s)
- Ji-Eun Kim
- SEEDERS Inc, Daejeon, 34015 Republic of Korea
| | | | | | | | - Whan Cho
- SEEDERS Inc, Daejeon, 34015 Republic of Korea
| | - Ji Hong Ha
- The Korean Sapsaree Foundation, Gyeongsan, Gyeongbuk 38412 Republic of Korea
| | - Ki Jin Kwon
- The Korean Sapsaree Foundation, Gyeongsan, Gyeongbuk 38412 Republic of Korea
| | - Kook Il Han
- Department of Animal training and event, Daekyeung University, Gyeongsan, Gyeongbuk 38547 Republic of Korea
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