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Huo W, Zhang L, Liu Y, He X, Qi P, Dai L, Qiao T, Lu P, Li J. Microstoma Ningshanica, a new species of Microstoma based on molecular, light and scanning electron microscopy analyses from Shaanxi Province, China. ALL LIFE 2022. [DOI: 10.1080/26895293.2022.2114551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022] Open
Affiliation(s)
- Wenyan Huo
- Fungal Research Center, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
- Qinling Field Scientific Observation and Research Station for Macrofungal Resources, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
| | - Liguang Zhang
- Fungal Research Center, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
- Qinling Field Scientific Observation and Research Station for Macrofungal Resources, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
| | - Yu Liu
- Fungal Research Center, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
- Qinling Field Scientific Observation and Research Station for Macrofungal Resources, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
| | - Xuelian He
- Fungal Research Center, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
- Qinling Field Scientific Observation and Research Station for Macrofungal Resources, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
| | - Peng Qi
- Fungal Research Center, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
- Qinling Field Scientific Observation and Research Station for Macrofungal Resources, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
| | - Lu Dai
- Fungal Research Center, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
- Qinling Field Scientific Observation and Research Station for Macrofungal Resources, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
| | - Ting Qiao
- Fungal Research Center, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
- Qinling Field Scientific Observation and Research Station for Macrofungal Resources, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
| | - Peng Lu
- Fungal Research Center, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
- Qinling Field Scientific Observation and Research Station for Macrofungal Resources, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
| | - Junzhi Li
- Fungal Research Center, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
- Qinling Field Scientific Observation and Research Station for Macrofungal Resources, Shaanxi Provincial Institute of Microbiology, Xi’an, People’s Republic of China
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Lee JW, Park MS, Park JH, Cho Y, Kim C, Kim CS, Jo JW, Lim YW. Taxonomic Study of the Genus Pholiota (Strophariaceae, Basidiomycota) in Korea. MYCOBIOLOGY 2020; 48:476-483. [PMID: 33312014 PMCID: PMC7717605 DOI: 10.1080/12298093.2020.1831427] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/19/2020] [Revised: 09/28/2020] [Accepted: 09/29/2020] [Indexed: 06/12/2023]
Abstract
The genus Pholiota (Strophariaceae, Basidiomycota) is made up of wood-rotting saprotrophic mushrooms characterized by a yellow or brown pileus with scales and/or slimy, and by a brownish smooth spore with a germ pore. However, these features are not enough to distinguish its species, or separate the genus Pholiota from other brown-spored wood-rotting genera such as Hypholoma and Stropharia. Although internal transcribed spacer (ITS) sequence-based identification has improved identification accuracy for species of Pholiota, most Pholiota species in Korea are reported based on morphological features. To evaluate the taxonomy of Pholiota species, we investigated 62 specimens collected from 1999 to 2019 in Korea using ITS sequence analysis and morphological observation. Twelve of the 16 recorded Pholiota species in Korea were identified. While eight species were clearly separated, the ITS analysis did not distinguish three in the Pholiota adiposa complex. Therefore, further investigation is required to distinguish these three species. ITS sequences deposited in GenBank confirm that P. highlandensis exists in Korea. The presence of the other four Pholiota species could not be confirmed through specimens or sequence information in GenBank. A taxonomic key and the ITS sequence data for Korean Pholiota species are included and can be good baselines for further research on Pholiota taxonomy and diversity.
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Affiliation(s)
- Jun Won Lee
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, Republic of Korea
| | - Myung Soo Park
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, Republic of Korea
| | - Ji-Hyun Park
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, Republic of Korea
| | - Yoonhee Cho
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, Republic of Korea
| | - Changmu Kim
- Microorganism Resources Division, National Institute of Biological Resources, Incheon, Republic of Korea
| | - Chang Sun Kim
- Taxonomy Research Lab, Forest Biodiversity Division, Korea National Arboretum, Gyeonggi-do, Korea
| | - Jong Won Jo
- Taxonomy Research Lab, Forest Biodiversity Division, Korea National Arboretum, Gyeonggi-do, Korea
| | - Young Woon Lim
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, Republic of Korea
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Investigating Wood Decaying Fungi Diversity in Central Siberia, Russia Using ITS Sequence Analysis and Interaction with Host Trees. SUSTAINABILITY 2020. [DOI: 10.3390/su12062535] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Wood-decay fungi (WDF) play a significant role in recycling nutrients, using enzymatic and mechanical processes to degrade wood. Designated as a biodiversity hot spot, Central Siberia is a geographically important region for understanding the spatial distribution and the evolutionary processes shaping biodiversity. There have been several studies of WDF diversity in Central Siberia, but identification of species was based on morphological characteristics, lacking detailed descriptions and molecular data. Thus, the aim of this study was to identify WDF in Central Siberia, regarding the degradation of host trees based on both morphological and molecular analyses. We collected 106 WDF samples from Krasnoyarsk and the Republic of Khakassia in 2014 and 2017, and identified a total of 52 fungal species from six main host tree genera. In order to assess the host preference of the WDF, we examined previous literature, and data from this study. We confirmed a division in host preference of WDF between gymnosperms and angiosperms. DNA-based identification and host preference assessment of the WDF provide preliminary data on WDF diversity and their role in nutrient cycles in the ecosystem of Central Siberia. To fully understand WDF diversity in Central Siberia, continuous long-term surveys, including DNA sequence data, are needed.
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He MQ, Zhao RL, Hyde KD, Begerow D, Kemler M, Yurkov A, McKenzie EHC, Raspé O, Kakishima M, Sánchez-Ramírez S, Vellinga EC, Halling R, Papp V, Zmitrovich IV, Buyck B, Ertz D, Wijayawardene NN, Cui BK, Schoutteten N, Liu XZ, Li TH, Yao YJ, Zhu XY, Liu AQ, Li GJ, Zhang MZ, Ling ZL, Cao B, Antonín V, Boekhout T, da Silva BDB, De Crop E, Decock C, Dima B, Dutta AK, Fell JW, Geml J, Ghobad-Nejhad M, Giachini AJ, Gibertoni TB, Gorjón SP, Haelewaters D, He SH, Hodkinson BP, Horak E, Hoshino T, Justo A, Lim YW, Menolli N, Mešić A, Moncalvo JM, Mueller GM, Nagy LG, Nilsson RH, Noordeloos M, Nuytinck J, Orihara T, Ratchadawan C, Rajchenberg M, Silva-Filho AGS, Sulzbacher MA, Tkalčec Z, Valenzuela R, Verbeken A, Vizzini A, Wartchow F, Wei TZ, Weiß M, Zhao CL, Kirk PM. Notes, outline and divergence times of Basidiomycota. FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00435-4] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
AbstractThe Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to the Ascomycota. The present work provides an overview of all validly published, currently used basidiomycete genera to date in a single document. An outline of all genera of Basidiomycota is provided, which includes 1928 currently used genera names, with 1263 synonyms, which are distributed in 241 families, 68 orders, 18 classes and four subphyla. We provide brief notes for each accepted genus including information on classification, number of accepted species, type species, life mode, habitat, distribution, and sequence information. Furthermore, three phylogenetic analyses with combined LSU, SSU, 5.8s, rpb1, rpb2, and ef1 datasets for the subphyla Agaricomycotina, Pucciniomycotina and Ustilaginomycotina are conducted, respectively. Divergence time estimates are provided to the family level with 632 species from 62 orders, 168 families and 605 genera. Our study indicates that the divergence times of the subphyla in Basidiomycota are 406–430 Mya, classes are 211–383 Mya, and orders are 99–323 Mya, which are largely consistent with previous studies. In this study, all phylogenetically supported families were dated, with the families of Agaricomycotina diverging from 27–178 Mya, Pucciniomycotina from 85–222 Mya, and Ustilaginomycotina from 79–177 Mya. Divergence times as additional criterion in ranking provide additional evidence to resolve taxonomic problems in the Basidiomycota taxonomic system, and also provide a better understanding of their phylogeny and evolution.
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Park MS, Cho HJ, Kim NK, Park JY, Lee H, Park KH, Kim MJ, Kim JJ, Kim C, Lim YW. Ten New Recorded Species of Macrofungi on Ulleung Island, Korea. MYCOBIOLOGY 2017; 45:286-296. [PMID: 29371796 PMCID: PMC5780360 DOI: 10.5941/myco.2017.45.4.286] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2017] [Revised: 09/29/2017] [Accepted: 10/11/2017] [Indexed: 05/27/2023]
Abstract
Ulleung Island is a biodiversity hotspot in South Korea. During a survey of indigenous fungal species from Ulleung Island conducted from 2015 to 2016, we discovered 10 unrecorded macrofungi in Korea. These macrofungi were identified to the species level using morphological features and phylogenetic analysis based on the internal transcribed spacer region: Deconica phyllogena, Mycena zephirus, Phaeomarasmius proximans, Phlebia radiata, Pluteus semibulbosus, Postia alni, Resinicium pinicola, Scytinostroma portentosum, Tricholomopsis flammula, and Tyromyces kmetii. We also provide detailed morphological descriptions for these 10 species.
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Affiliation(s)
- Myung Soo Park
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul 08826, Korea
| | - Hae Jin Cho
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul 08826, Korea
| | - Nam Kyu Kim
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul 08826, Korea
| | - Jae Young Park
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul 08826, Korea
| | - Hyun Lee
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul 08826, Korea
| | - Ki Hyeong Park
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul 08826, Korea
| | - Min-Ji Kim
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul 08826, Korea
| | - Jae-Jin Kim
- Division of Environmental Science & Ecological Engineering, Korea University, Seoul 02841, Korea
| | - Changmu Kim
- Microorganism Resources Division, National Institute of Biological Resources, Incheon 22689, Korea
| | - Young Woon Lim
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul 08826, Korea
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Kwon J, Lee H, Yoon YD, Hwang BY, Guo Y, Kang JS, Kim JJ, Lee D. Lanostane Triterpenes Isolated from Antrodia heteromorpha and Their Inhibitory Effects on RANKL-Induced Osteoclastogenesis. JOURNAL OF NATURAL PRODUCTS 2016; 79:1689-1693. [PMID: 27266877 DOI: 10.1021/acs.jnatprod.6b00207] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Two new spiro-lanostane triterpenoids, antrolactones A and B (1 and 2), along with polyporenic acid C (3), were isolated from an EtOAc-soluble extract of Antrodia heteromorpha culture medium, and the chemical structures of the new compounds were elucidated by application of NMR, MS, and ECD spectroscopic techniques. All isolated compounds exhibited inhibitory effects on receptor activator of nuclear factor-kappaB ligand-induced osteoclastogenesis.
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Affiliation(s)
| | | | - Yeo Dae Yoon
- Bio-Evaluation Center, Korea Research Institute of Bioscience and Biotechnology , Cheongju 28116, Republic of Korea
| | - Bang Yeon Hwang
- College of Pharmacy, Chungbuk National University , Cheongju 28644, Republic of Korea
| | - Yuanqiang Guo
- State Key Laboratory of Medicinal Chemical Biology, College of Pharmacy, and Tianjin Key Laboratory of Molecular Drug Research, Nankai University , Tianjin 300353, People's Republic of China
| | - Jong Soon Kang
- Bio-Evaluation Center, Korea Research Institute of Bioscience and Biotechnology , Cheongju 28116, Republic of Korea
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