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Catalá TS, Speidel LG, Wenzel-Storjohann A, Dittmar T, Tasdemir D. Bioactivity profile of dissolved organic matter and its relation to molecular composition. NATURAL PRODUCTS AND BIOPROSPECTING 2023; 13:32. [PMID: 37721596 PMCID: PMC10507005 DOI: 10.1007/s13659-023-00395-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2023] [Accepted: 08/30/2023] [Indexed: 09/19/2023]
Abstract
Dissolved organic matter (DOM) occupies a huge and uncharted molecular space. Given its properties, DOM can be presented as a promising biotechnological resource. However, research into bioactivities of DOM is still in early stages. In this study, the biotechnological potential of terrestrial and marine DOM, its molecular composition and their relationships are investigated. Samples were screened for their in vitro antibacterial, antifungal, anticancer and antioxidant activities. Antibacterial activity was detected against Staphylococcus aureus in almost all DOM samples, with freshwater DOM showing the lowest IC50 values. Most samples also inhibited Staphylococcus epidermidis, and four DOM extracts showed up to fourfold higher potency than the reference drug. Antifungal activity was limited to only porewater DOM towards human dermatophyte Trichophyton rubrum. No significant in vitro anticancer activity was observed. Low antioxidant potential was exerted. The molecular characterization by FT-ICR MS allowed a broad compositional overview. Three main distinguished groups have been identified by PCoA analyses. Antibacterial activities are related to high aromaticity content and highly-unsaturated molecular formulae (O-poor). Antifungal effect is correlated with highly-unsaturated molecular formulae (O-rich). Antioxidant activity is positively related to the presence of double bonds and polyphenols. This study evidenced for the first time antibacterial and antifungal activity in DOM with potential applications in cosmeceutical, pharmaceutical and aquaculture industry. The lack of cytotoxicity and the almost unlimited presence of this organic material may open new avenues in future marine bioprospecting efforts.
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Affiliation(s)
- Teresa S Catalá
- Global Society Institute, Wälderhaus, Hamburg, Germany.
- Organization for Science, Education and Global Society gGmbH, Stuttgart, Germany.
- ICBM-MPI Bridging Group for Marine Geochemistry, Institute for Chemistry and Biology of the Marine Environment (ICBM), University of Oldenburg, Oldenburg, Germany.
| | - Linn G Speidel
- ICBM-MPI Bridging Group for Marine Geochemistry, Institute for Chemistry and Biology of the Marine Environment (ICBM), University of Oldenburg, Oldenburg, Germany
- Geological Institute, Department of Earth Sciences, ETH Zurich, 8092, Zurich, Switzerland
| | - Arlette Wenzel-Storjohann
- GEOMAR Centre for Marine Biotechnology, Research Unit Marine Natural Products Chemistry, GEOMAR Helmholtz Centre for Ocean Research Kiel, Am Kiel-Kanal 44, 24106, Kiel, Germany
| | - Thorsten Dittmar
- ICBM-MPI Bridging Group for Marine Geochemistry, Institute for Chemistry and Biology of the Marine Environment (ICBM), University of Oldenburg, Oldenburg, Germany
- Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg, Oldenburg, Germany
| | - Deniz Tasdemir
- GEOMAR Centre for Marine Biotechnology, Research Unit Marine Natural Products Chemistry, GEOMAR Helmholtz Centre for Ocean Research Kiel, Am Kiel-Kanal 44, 24106, Kiel, Germany
- Kiel University, Christian-Albrechts-Platz 4, 24118, Kiel, Germany
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2
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Hansen BK, Larsen CK, Nielsen JT, Svenningsen EB, Van LB, Jacobsen KM, Bjerring M, Flygaard RK, Jenner LB, Nejsum LN, Brodersen DE, Mulder FA, Tørring T, Poulsen TB. Structure and Function of the Bacterial Protein Toxin Phenomycin. Structure 2020; 28:528-539.e9. [DOI: 10.1016/j.str.2020.03.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2019] [Revised: 02/19/2020] [Accepted: 03/09/2020] [Indexed: 10/24/2022]
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3
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Wang N, Liu H, Gao H, Zhou J, Zheng L, Li J, Xiao HP, Li X, Jiang J. Ni(II)-Catalyzed Enantioselective Synthesis of β-Hydroxy Esters with Carboxylate Assistance. Org Lett 2019; 21:6684-6689. [PMID: 31393737 DOI: 10.1021/acs.orglett.9b02297] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A Ni-oxazoline complex-catalyzed asymmetric decarboxylative aldol reaction between malonic acid half-oxyesters and various carbonyls with carboxylate assistance was developed, affording structurally diverse β-hydroxy esters with good yields and enantioselectivities under mild conditions. Importantly, the broad substrate scope of this methodology enabled rapid accesses to several natural products and their analogues as exemplified by phenylpropanoid, phaitanthrin B, and phthalide.
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Affiliation(s)
- Na Wang
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Hongxin Liu
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Hang Gao
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Jiafeng Zhou
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Longzhangdi Zheng
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Juan Li
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Hong-Ping Xiao
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Xinhua Li
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Jun Jiang
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
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4
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Bhowmik A, Mulay SV, Fernandes RA. A Step‐Economic Synthesis of (
S
)‐(−)‐Juglomycin C and (
S
)‐(−)‐NHAB by Dötz Benzannulation and Convergent Deprotections. ASIAN J ORG CHEM 2019. [DOI: 10.1002/ajoc.201900211] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Amit Bhowmik
- Department of ChemistryIndian Institute of Technology-Bombay Powai Mumbai 400076, Maharashtra India
| | - Sandip V. Mulay
- Department of ChemistryIndian Institute of Technology-Bombay Powai Mumbai 400076, Maharashtra India
| | - Rodney A. Fernandes
- Department of ChemistryIndian Institute of Technology-Bombay Powai Mumbai 400076, Maharashtra India
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5
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da Silva Júnior EN, Jardim GAM, Gomes RS, Liang YF, Ackermann L. Weakly-coordinating N-oxide and carbonyl groups for metal-catalyzed C–H activation: the case of A-ring functionalization. Chem Commun (Camb) 2018; 54:7398-7411. [DOI: 10.1039/c8cc03147a] [Citation(s) in RCA: 54] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
This feature review is focused on recent challenges based on the functionalizations at C-8 and C-5 positions of heterocyclic and quinoidal compounds – a topic that is still rarely explored in the literature.
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Affiliation(s)
| | - Guilherme A. M. Jardim
- Institute of Exact Sciences
- Department of Chemistry
- Federal University of Minas Gerais
- Belo Horizonte
- Brazil
| | - Roberto S. Gomes
- Faculty of Exact Sciences and Technologies
- Federal University of Grande Dourados
- Dourados
- Brazil
- Department of Chemistry and Chemical Biology
| | - Yu-Feng Liang
- Institut für Organische und Biomolekulare Chemie
- Georg-August-Universität Göttingen
- Gottingen 37077
- Germany
| | - Lutz Ackermann
- Institut für Organische und Biomolekulare Chemie
- Georg-August-Universität Göttingen
- Gottingen 37077
- Germany
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6
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Dias GG, Rogge T, Kuniyil R, Jacob C, Menna-Barreto RFS, da Silva Júnior EN, Ackermann L. Ruthenium-catalyzed C–H oxygenation of quinones by weak O-coordination for potent trypanocidal agents. Chem Commun (Camb) 2018; 54:12840-12843. [DOI: 10.1039/c8cc07572g] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
C–H oxygenation of quinones by weak O-coordination was achieved by versatile ruthenium(ii) catalysis with ample substrate scope and trypanocidal compounds were also identified.
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Affiliation(s)
- Gleiston G. Dias
- Institute of Exact Sciences
- Department of Chemistry
- Federal University of Minas Gerais
- MG
- Brazil
| | - Torben Rogge
- Institut für Organische und Biomolekulare Chemie
- Georg-August-Universität
- Göttingen
- 37077 Göttingen
- Germany
| | - Rositha Kuniyil
- Institut für Organische und Biomolekulare Chemie
- Georg-August-Universität
- Göttingen
- 37077 Göttingen
- Germany
| | - Claus Jacob
- Division of Bioorganic Chemistry
- School of Pharmacy
- University of Saarland
- D-66123 Saarbruecken
- Germany
| | | | | | - Lutz Ackermann
- Institut für Organische und Biomolekulare Chemie
- Georg-August-Universität
- Göttingen
- 37077 Göttingen
- Germany
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7
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Jardim GAM, Oliveira WXC, de Freitas RP, Menna-Barreto RFS, Silva TL, Goulart MOF, da Silva Júnior EN. Direct sequential C–H iodination/organoyl-thiolation for the benzenoid A-ring modification of quinonoid deactivated systems: a new protocol for potent trypanocidal quinones. Org Biomol Chem 2018; 16:1686-1691. [DOI: 10.1039/c8ob00196k] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Under a combination of AgSR with a copper source, sulfur-substituted benzenoid quinones were prepared in high yields (generally >90%). The compounds have presented significant activity against T. cruzi, the etiologic agent of Chagas disease.
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Affiliation(s)
- Guilherme A. M. Jardim
- Institute of Exact Sciences
- Department of Chemistry
- Federal University of Minas Gerais
- Belo Horizonte
- Brazil
| | - Willian X. C. Oliveira
- Institute of Exact Sciences
- Department of Chemistry
- Federal University of Minas Gerais
- Belo Horizonte
- Brazil
| | - Rossimiriam P. de Freitas
- Institute of Exact Sciences
- Department of Chemistry
- Federal University of Minas Gerais
- Belo Horizonte
- Brazil
| | | | - Thaissa L. Silva
- Institute of Chemistry and Biotechnology
- Federal University of Alagoas
- Maceió
- Brazil
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8
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Jardim GAM, da Silva Júnior EN, Bower JF. Overcoming naphthoquinone deactivation: rhodium-catalyzed C-5 selective C-H iodination as a gateway to functionalized derivatives. Chem Sci 2016; 7:3780-3784. [PMID: 30155019 PMCID: PMC6013821 DOI: 10.1039/c6sc00302h] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2016] [Accepted: 02/18/2016] [Indexed: 01/26/2023] Open
Abstract
We report a Rh-catalyzed method for the C-5 selective C-H iodination of naphthoquinones and show that complementary C-2 selective processes can be achieved under related conditions. C-C bond forming derivatizations of the C-5 iodinated products provide a gateway to previously inaccessible A-ring analogues. The present study encompasses the first catalytic directed ortho-functionalizations of simple (non-bias) naphthoquinones. The strategic considerations outlined here are likely to be applicable to C-H functionalizations of other weakly coordinating and/or redox sensitive substrates.
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Affiliation(s)
- Guilherme A M Jardim
- School of Chemistry , University of Bristol , Bristol , BS8 1TS , UK . .,Institute of Exact Sciences , Department of Chemistry , Federal University of Minas Gerais , Belo Horizonte , MG 31270-901 , Brazil .
| | - Eufrânio N da Silva Júnior
- Institute of Exact Sciences , Department of Chemistry , Federal University of Minas Gerais , Belo Horizonte , MG 31270-901 , Brazil .
| | - John F Bower
- School of Chemistry , University of Bristol , Bristol , BS8 1TS , UK .
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10
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Fernandes RA, Chavan VP, Mulay SV, Manchoju A. A Chiron Approach to the Total Synthesis of (−)-Juglomycin A, (+)-Kalafungin, (+)-Frenolicin B, and (+)-Deoxyfrenolicin. J Org Chem 2012; 77:10455-60. [DOI: 10.1021/jo3019939] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Rodney A. Fernandes
- Department
of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, Maharashtra,
India
| | - Vijay P. Chavan
- Department
of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, Maharashtra,
India
| | - Sandip V. Mulay
- Department
of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, Maharashtra,
India
| | - Amarender Manchoju
- Department
of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, Maharashtra,
India
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11
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Fernandes RA, Chavan VP. A Dötz benzannulation route to the enantioselective synthesis of (−)- and (+)-juglomycin A. ACTA ACUST UNITED AC 2011. [DOI: 10.1016/j.tetasy.2011.07.018] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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12
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A highly enantioselective synthesis of (−)- and (+)-juglomycin A through Dötz annulation and asymmetric dihydroxylation. Tetrahedron Lett 2008. [DOI: 10.1016/j.tetlet.2008.04.059] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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13
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14
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Affiliation(s)
- Jong‐Pil Min
- a Department of Chemistry, College of Natural Sciences , Chungbuk National University , Cheongju, Chungbuk, 361-763, Korea
| | - Ju‐Cheun Kim
- a Department of Chemistry, College of Natural Sciences , Chungbuk National University , Cheongju, Chungbuk, 361-763, Korea
| | - Oee‐Sook Park
- a Department of Chemistry, College of Natural Sciences , Chungbuk National University , Cheongju, Chungbuk, 361-763, Korea
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15
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Abstract
Juglomycin A has been synthesized in four steps from 5-methoxy-1-naphthol.
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Affiliation(s)
- Hiroshi Maeda
- Department of Chemistry, Iowa State University, Ames, Iowa 50011
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16
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Brimble MA, Ireland E, Phythian SJ. The synthesis of 5′-deoxyjuglomycin A and 5′-methoxyjuglomycin A. Tetrahedron Lett 1991. [DOI: 10.1016/0040-4039(91)80184-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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