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Zhang R, Rong R, Gan JQ, Xu Y, Wang H, Wang X. Reliable and fast automatic artifact rejection of Long-Term EEG recordings based on Isolation Forest. Med Biol Eng Comput 2024; 62:521-535. [PMID: 37943419 DOI: 10.1007/s11517-023-02961-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2023] [Accepted: 10/28/2023] [Indexed: 11/10/2023]
Abstract
Long-term electroencephalogram (Long-Term EEG) has the capacity to monitor over a long period, making it a valuable tool in medical institutions. However, due to the large volume of patient data, selecting clean data segments from raw Long-Term EEG for further analysis is an extremely time-consuming and labor-intensive task. Furthermore, the various actions of patients during recording make it difficult to use algorithms to denoise part of the EEG data, and thus lead to the rejection of these data. Therefore, tools for the quick rejection of heavily corrupted epochs in Long-Term EEG records are highly beneficial. In this paper, a new reliable and fast automatic artifact rejection method for Long-Term EEG based on Isolation Forest (IF) is proposed. Specifically, the IF algorithm is repetitively applied to detect outliers in the EEG data, and the boundary of inliers is promptly adjusted by using a statistical indicator to make the algorithm proceed in an iterative manner. The iteration is terminated when the distance metric between clean epochs and artifact-corrupted epochs remains unchanged. Six statistical indicators (i.e., min, max, median, mean, kurtosis, and skewness) are evaluated by setting them as centroid to adjust the boundary during iteration, and the proposed method is compared with several state-of-the-art methods on a retrospectively collected dataset. The experimental results indicate that utilizing the min value of data as the centroid yields the most optimal performance, and the proposed method is highly efficacious and reliable in the automatic artifact rejection of Long-Term EEG, as it significantly improves the overall data quality. Furthermore, the proposed method surpasses compared methods on most data segments with poor data quality, demonstrating its superior capacity to enhance the data quality of the heavily corrupted data. Besides, owing to the linear time complexity of IF, the proposed method is much faster than other methods, thus providing an advantage when dealing with extensive datasets.
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Affiliation(s)
- Runkai Zhang
- Key Laboratory of Child Development and Learning Science of Ministry of Education, School of Biological Science & Medical Engineering, Southeast University, Nanjing, 210096, Jiangsu, People's Republic of China
| | - Rong Rong
- Department of Neurology, Nanjing Drum Tower Hospital, Nanjing, 210008, Jiangsu, People's Republic of China
| | - John Q Gan
- School of Computer Science and Electronic Engineering, University of Essex, Colchester, CO4 3SQ, UK
| | - Yun Xu
- Department of Neurology, Nanjing Drum Tower Hospital, Nanjing, 210008, Jiangsu, People's Republic of China
| | - Haixian Wang
- Key Laboratory of Child Development and Learning Science of Ministry of Education, School of Biological Science & Medical Engineering, Southeast University, Nanjing, 210096, Jiangsu, People's Republic of China.
| | - Xiaoyun Wang
- Department of Neurology, Nanjing Drum Tower Hospital, Nanjing, 210008, Jiangsu, People's Republic of China.
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2
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Ille N, Nakao Y, Yano S, Taura T, Ebert A, Bornfleth H, Asagi S, Kozawa K, Itabashi I, Sato T, Sakuraba R, Tsuda R, Kakisaka Y, Jin K, Nakasato N. Ongoing EEG artifact correction using blind source separation. Clin Neurophysiol 2024; 158:149-158. [PMID: 38219404 DOI: 10.1016/j.clinph.2023.12.133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Revised: 11/23/2023] [Accepted: 12/15/2023] [Indexed: 01/16/2024]
Abstract
OBJECTIVE Analysis of the electroencephalogram (EEG) for epileptic spike and seizure detection or brain-computer interfaces can be severely hampered by the presence of artifacts. The aim of this study is to describe and evaluate a fast automatic algorithm for ongoing correction of artifacts in continuous EEG recordings, which can be applied offline and online. METHODS The automatic algorithm for ongoing correction of artifacts is based on fast blind source separation. It uses a sliding window technique with overlapping epochs and features in the spatial, temporal and frequency domain to detect and correct ocular, cardiac, muscle and powerline artifacts. RESULTS The approach was validated in an independent evaluation study on publicly available continuous EEG data with 2035 marked artifacts. Validation confirmed that 88% of the artifacts could be removed successfully (ocular: 81%, cardiac: 84%, muscle: 98%, powerline: 100%). It outperformed state-of-the-art algorithms both in terms of artifact reduction rates and computation time. CONCLUSIONS Fast ongoing artifact correction successfully removed a good proportion of artifacts, while preserving most of the EEG signals. SIGNIFICANCE The presented algorithm may be useful for ongoing correction of artifacts, e.g., in online systems for epileptic spike and seizure detection or brain-computer interfaces.
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Affiliation(s)
| | | | | | | | | | | | - Suguru Asagi
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Kanoko Kozawa
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Izumi Itabashi
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Takafumi Sato
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Rie Sakuraba
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Rie Tsuda
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Yosuke Kakisaka
- Department of Epileptology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Kazutaka Jin
- Department of Epileptology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Nobukazu Nakasato
- Department of Epileptology, Tohoku University Graduate School of Medicine, Sendai, Japan
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3
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Schmoigl-Tonis M, Schranz C, Müller-Putz GR. Methods for motion artifact reduction in online brain-computer interface experiments: a systematic review. Front Hum Neurosci 2023; 17:1251690. [PMID: 37920561 PMCID: PMC10619676 DOI: 10.3389/fnhum.2023.1251690] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2023] [Accepted: 09/11/2023] [Indexed: 11/04/2023] Open
Abstract
Brain-computer interfaces (BCIs) have emerged as a promising technology for enhancing communication between the human brain and external devices. Electroencephalography (EEG) is particularly promising in this regard because it has high temporal resolution and can be easily worn on the head in everyday life. However, motion artifacts caused by muscle activity, fasciculation, cable swings, or magnetic induction pose significant challenges in real-world BCI applications. In this paper, we present a systematic review of methods for motion artifact reduction in online BCI experiments. Using the PRISMA filter method, we conducted a comprehensive literature search on PubMed, focusing on open access publications from 1966 to 2022. We evaluated 2,333 publications based on predefined filtering rules to identify existing methods and pipelines for motion artifact reduction in EEG data. We present a lookup table of all papers that passed the defined filters, all used methods, and pipelines and compare their overall performance and suitability for online BCI experiments. We summarize suitable methods, algorithms, and concepts for motion artifact reduction in online BCI applications, highlight potential research gaps, and discuss existing community consensus. This review aims to provide a comprehensive overview of the current state of the field and guide researchers in selecting appropriate methods for motion artifact reduction in online BCI experiments.
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Affiliation(s)
- Mathias Schmoigl-Tonis
- Laboratory of Collaborative Robotics, Department of Human Motion Analytics, Salzburg Research GmbH, Salzburg, Austria
- Institute of Neural Engineering, Laboratory of Brain-Computer Interfaces, Graz University of Technology, Graz, Austria
| | - Christoph Schranz
- Laboratory of Collaborative Robotics, Department of Human Motion Analytics, Salzburg Research GmbH, Salzburg, Austria
| | - Gernot R. Müller-Putz
- Institute of Neural Engineering, Laboratory of Brain-Computer Interfaces, Graz University of Technology, Graz, Austria
- BioTechMed Graz, Graz, Austria
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4
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Wang W, Li B. A novel model based on a 1D-ResCNN and transfer learning for processing EEG attenuation. Comput Methods Biomech Biomed Engin 2023; 26:1980-1993. [PMID: 36591913 DOI: 10.1080/10255842.2022.2162339] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2022] [Revised: 12/13/2022] [Accepted: 12/20/2022] [Indexed: 01/03/2023]
Abstract
EEG signals are valuable signals in clinical medicine, brain research, and the study of neurological illnesses. However, EEG signal attenuation may occur at any time from signal generation through BCI device acquisition due to defects in the brain-computer interface (BCI) devices, restrictions in the dynamic network, and individual variations across the subjects. The attenuation of EEG data will alter the data distribution and lead to information fuzziness, substantially influencing subsequent EEG research. A model based on one-dimensional residual convolutional neural networks (1D-ResCNN) and transfer learning is proposed in this article to reduce the negative impacts of EEG attenuation. An end-to-end manner maps an attenuated EEG signal to a normal EEG signal. The structure employs a multi-level residual connection structure with varying weight coefficients, transferring characteristics from the bottom to the top of the convolutional neural network, enhancing feature learning. In addition, we initialize the subsequent denoising model using the transfer learning method. The combination of these two networks can well solve the attenuation problem of EEG signals. Experiments are carried out using the EEG-denoisenet data set. According to the findings, the model can yield a clear waveform with a decent SNR and RRMSE value.
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Affiliation(s)
- Wenlong Wang
- The School of Electrical Engineering, Shanghai Dianji University, Shanghai, China
- Intelligent Decision and Control Technology Institute, Shanghai Dianji University, Shanghai, China
| | - Baojiang Li
- The School of Electrical Engineering, Shanghai Dianji University, Shanghai, China
- Intelligent Decision and Control Technology Institute, Shanghai Dianji University, Shanghai, China
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Ebrahimpour M, Abbott D, Baumert M. Investigation of the Common Independent Component Analysis Approaches in Biological Signals for Removing Cardiac Field Artefact from EEG. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2023; 2023:1-5. [PMID: 38083279 DOI: 10.1109/embc40787.2023.10340427] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2023]
Abstract
Electroencephalography (EEG) signals are often impacted by the cardiac field artefact (CFA), which can compromise EEG analysis. Independent component analysis (ICA) has proven effective in removing such artefacts, including CFA. This paper examines three well-known ICA algorithms commonly utilized in EEG signal processing and assesses their ability to decompose EEG into independent components (ICs) to remove CFA. The paper also investigates whether a new two-level ICA approach can improve performance. Results are evaluated using a synthetic dataset of 10 subjects.
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Wang M, Cui X, Wang T, Jiang T, Gao F, Cao J. Eye blink artifact detection based on multi-dimensional EEG feature fusion and optimization. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104657] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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Lopes F, Leal A, Medeiros J, Pinto MF, Dourado A, Dümpelmann M, Teixeira C. EPIC: Annotated epileptic EEG independent components for artifact reduction. Sci Data 2022; 9:512. [PMID: 35987693 PMCID: PMC9392781 DOI: 10.1038/s41597-022-01524-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Accepted: 06/28/2022] [Indexed: 11/13/2022] Open
Abstract
Scalp electroencephalogram is a non-invasive multi-channel biosignal that records the brain’s electrical activity. It is highly susceptible to noise that might overshadow important data. Independent component analysis is one of the most used artifact removal methods. Independent component analysis separates data into different components, although it can not automatically reject the noisy ones. Therefore, experts are needed to decide which components must be removed before reconstructing the data. To automate this method, researchers have developed classifiers to identify noisy components. However, to build these classifiers, they need annotated data. Manually classifying independent components is a time-consuming task. Furthermore, few labelled data are publicly available. This paper presents a source of annotated electroencephalogram independent components acquired from patients with epilepsy (EPIC Dataset). This dataset contains 77,426 independent components obtained from approximately 613 hours of electroencephalogram, visually inspected by two experts, which was already successfully utilised to develop independent component classifiers. Measurement(s) | Electroencephalogram Independent Components | Technology Type(s) | MATLAB and Python |
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8
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Zou Y, Zhao X, Chu Y, Xu W, Han J, Li W. A supervised independent component analysis algorithm for motion imagery-based brain computer interface. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103576] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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9
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Lopes F, Leal A, Medeiros J, Pinto MF, Dourado A, Dumpelmann M, Teixeira C. Ensemble Deep Neural Network for Automatic Classification of EEG Independent Components. IEEE Trans Neural Syst Rehabil Eng 2022; 30:559-568. [PMID: 35213313 DOI: 10.1109/tnsre.2022.3154891] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
OBJECTIVE Independent component analysis (ICA) is commonly used to remove noisy artifacts from multi-channel scalp electroencephalogram (EEG) signals. ICA decomposes EEG into different independent components (ICs) and then, experts remove the noisy ones. This process is highly time-consuming and experts are not always available. To surpass this drawback, research is going on to develop models to automatically conduct IC classification. Current state-of-the-art models use power spectrum densities (PSDs) and topoplots to classify ICs. The performance of these methods may be limited by disregarding the IC time-series that would contribute to fully simulate the visual inspection performed by experts. METHODS We present a novel ensemble deep neural network that combines time-series, PSDs, and topoplots to classify ICs. Moreover, we study the ability to use our model in transfer learning approaches. RESULTS Experimental results showed that using time-series improves IC classification. Results also indicated that transfer learning obtained higher performance than simply training a new model from scratch. CONCLUSION Researchers should develop IC classifiers using the three sources of information. Moreover, transfer learning approaches should be considered when producing new deep learning models. SIGNIFICANCE This work improves IC classification, enhancing the automatic removal of EEG artifacts. Additionally, since labelled ICs are generally not publicly available, the possibility of using our model in transfer learning studies may motivate other researchers to develop their own classifiers.
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10
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Soghoyan G, Ledovsky A, Nekrashevich M, Martynova O, Polikanova I, Portnova G, Rebreikina A, Sysoeva O, Sharaev M. A Toolbox and Crowdsourcing Platform for Automatic Labeling of Independent Components in Electroencephalography. Front Neuroinform 2021; 15:720229. [PMID: 34924988 PMCID: PMC8675888 DOI: 10.3389/fninf.2021.720229] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2021] [Accepted: 11/03/2021] [Indexed: 11/13/2022] Open
Abstract
Independent Component Analysis (ICA) is a conventional approach to exclude non-brain signals such as eye movements and muscle artifacts from electroencephalography (EEG). A rejection of independent components (ICs) is usually performed in semiautomatic mode and requires experts' involvement. As also revealed by our study, experts' opinions about the nature of a component often disagree, highlighting the need to develop a robust and sustainable automatic system for EEG ICs classification. The current article presents a toolbox and crowdsourcing platform for Automatic Labeling of Independent Components in Electroencephalography (ALICE) available via link http://alice.adase.org/. The ALICE toolbox aims to build a sustainable algorithm to remove artifacts and find specific patterns in EEG signals using ICA decomposition based on accumulated experts' knowledge. The difference from previous toolboxes is that the ALICE project will accumulate different benchmarks based on crowdsourced visual labeling of ICs collected from publicly available and in-house EEG recordings. The choice of labeling is based on the estimation of IC time-series, IC amplitude topography, and spectral power distribution. The platform allows supervised machine learning (ML) model training and re-training on available data subsamples for better performance in specific tasks (i.e., movement artifact detection in healthy or autistic children). Also, current research implements the novel strategy for consentient labeling of ICs by several experts. The provided baseline model could detect noisy IC and components related to the functional brain oscillations such as alpha and mu rhythm. The ALICE project implies the creation and constant replenishment of the IC database, which will improve ML algorithms for automatic labeling and extraction of non-brain signals from EEG. The toolbox and current dataset are open-source and freely available to the researcher community.
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Affiliation(s)
- Gurgen Soghoyan
- Center for Bioelectric Interfaces, National Research University Higher School of Economics, Moscow, Russia
- Laboratory of Human Higher Nervous Activity, Institute of Higher Nervous Activity and Neurophysiology, Russian Academy of Sciences, Moscow, Russia
| | - Alexander Ledovsky
- Laboratory of Human Higher Nervous Activity, Institute of Higher Nervous Activity and Neurophysiology, Russian Academy of Sciences, Moscow, Russia
- Research Center in AI, Skolkovo Institute of Science and Technology, Moscow, Russia
| | - Maxim Nekrashevich
- Research Center in AI, Skolkovo Institute of Science and Technology, Moscow, Russia
| | - Olga Martynova
- Laboratory of Human Higher Nervous Activity, Institute of Higher Nervous Activity and Neurophysiology, Russian Academy of Sciences, Moscow, Russia
| | - Irina Polikanova
- Faculty of Biology and Biotechnology, National Research University Higher School of Economics, Moscow, Russia
| | - Galina Portnova
- Laboratory of Human Higher Nervous Activity, Institute of Higher Nervous Activity and Neurophysiology, Russian Academy of Sciences, Moscow, Russia
| | - Anna Rebreikina
- Laboratory of Human Higher Nervous Activity, Institute of Higher Nervous Activity and Neurophysiology, Russian Academy of Sciences, Moscow, Russia
| | - Olga Sysoeva
- Laboratory of Human Higher Nervous Activity, Institute of Higher Nervous Activity and Neurophysiology, Russian Academy of Sciences, Moscow, Russia
| | - Maxim Sharaev
- Laboratory of Human Higher Nervous Activity, Institute of Higher Nervous Activity and Neurophysiology, Russian Academy of Sciences, Moscow, Russia
- Research Center in AI, Skolkovo Institute of Science and Technology, Moscow, Russia
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11
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Fiedler P, Fonseca C, Supriyanto E, Zanow F, Haueisen J. A high-density 256-channel cap for dry electroencephalography. Hum Brain Mapp 2021; 43:1295-1308. [PMID: 34796574 PMCID: PMC8837591 DOI: 10.1002/hbm.25721] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2021] [Revised: 10/29/2021] [Accepted: 11/08/2021] [Indexed: 11/09/2022] Open
Abstract
High‐density electroencephalography (HD‐EEG) is currently limited to laboratory environments since state‐of‐the‐art electrode caps require skilled staff and extensive preparation. We propose and evaluate a 256‐channel cap with dry multipin electrodes for HD‐EEG. We describe the designs of the dry electrodes made from polyurethane and coated with Ag/AgCl. We compare in a study with 30 volunteers the novel dry HD‐EEG cap to a conventional gel‐based cap for electrode‐skin impedances, resting state EEG, and visual evoked potentials (VEP). We perform wearing tests with eight electrodes mimicking cap applications on real human and artificial skin. Average impedances below 900 kΩ for 252 out of 256 dry electrodes enables recording with state‐of‐the‐art EEG amplifiers. For the dry EEG cap, we obtained a channel reliability of 84% and a reduction of the preparation time of 69%. After exclusion of an average of 16% (dry) and 3% (gel‐based) bad channels, resting state EEG, alpha activity, and pattern reversal VEP can be recorded with less than 5% significant differences in all compared signal characteristics metrics. Volunteers reported wearing comfort of 3.6 ± 1.5 and 4.0 ± 1.8 for the dry and 2.5 ± 1.0 and 3.0 ± 1.1 for the gel‐based cap prior and after the EEG recordings, respectively (scale 1–10). Wearing tests indicated that up to 3,200 applications are possible for the dry electrodes. The 256‐channel HD‐EEG dry electrode cap overcomes the principal limitations of HD‐EEG regarding preparation complexity and allows rapid application by not medically trained persons, enabling new use cases for HD‐EEG.
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Affiliation(s)
- Patrique Fiedler
- Institute of Biomedical Engineering and Informatics, Technische Universität IlmenauIlmenauGermany
| | - Carlos Fonseca
- Faculdade de Engenharia, Departamento de Engenharia Metalúrgica e de MateriaisUniversidade do PortoPortoPortugal
- LAETA/INEGI, Institute of Science and Innovation in Mechanical and Industrial EngineeringPortoPortugal
| | - Eko Supriyanto
- IJN‐UTM Cardiovascular Engineering Centre, Universiti Teknologi MalaysiaJohor BahruMalaysia
| | - Frank Zanow
- eemagine Medical Imaging Solutions GmbHBerlinGermany
| | - Jens Haueisen
- Institute of Biomedical Engineering and Informatics, Technische Universität IlmenauIlmenauGermany
- Department of NeurologyBiomagnetic Center, University Hospital JenaJenaGermany
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12
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Sensory-Motor Modulations of EEG Event-Related Potentials Reflect Walking-Related Macro-Affordances. Brain Sci 2021; 11:brainsci11111506. [PMID: 34827505 PMCID: PMC8615990 DOI: 10.3390/brainsci11111506] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 11/11/2021] [Accepted: 11/11/2021] [Indexed: 11/21/2022] Open
Abstract
One fundamental principle of the brain functional organization is the elaboration of sensory information for the specification of action plans that are most appropriate for interaction with the environment. Using an incidental go/no-go priming paradigm, we have previously shown a facilitation effect for the execution of a walking-related action in response to far vs. near objects/locations in the extrapersonal space, and this effect has been called “macro-affordance” to reflect the role of locomotion in the coverage of extrapersonal distance. Here, we investigated the neurophysiological underpinnings of such an effect by recording scalp electroencephalography (EEG) from 30 human participants during the same paradigm. The results of a whole-brain analysis indicated a significant modulation of the event-related potentials (ERPs) both during prime and target stimulus presentation. Specifically, consistent with a mechanism of action anticipation and automatic activation of affordances, a stronger ERP was observed in response to prime images framing the environment from a far vs. near distance, and this modulation was localized in dorso-medial motor regions. In addition, an inversion of polarity for far vs. near conditions was observed during the subsequent target period in dorso-medial parietal regions associated with spatially directed foot-related actions. These findings were interpreted within the framework of embodied models of brain functioning as arising from a mechanism of motor-anticipation and subsequent prediction error which was guided by the preferential affordance relationship between the distant large-scale environment and locomotion. More in general, our findings reveal a sensory-motor mechanism for the processing of walking-related environmental affordances.
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Heijs JJ, Havelaar RJ, Fiedler P, van Wezel RJ, Heida T. Validation of Soft Multipin Dry EEG Electrodes. SENSORS 2021; 21:s21206827. [PMID: 34696039 PMCID: PMC8541549 DOI: 10.3390/s21206827] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/10/2021] [Revised: 10/09/2021] [Accepted: 10/11/2021] [Indexed: 11/28/2022]
Abstract
Current developments towards multipin, dry electrodes in electroencephalography (EEG) are promising for applications in non-laboratory environments. Dry electrodes do not require the application of conductive gel, which mostly confines the use of gel EEG systems to the laboratory environment. The aim of this study is to validate soft, multipin, dry EEG electrodes by comparing their performance to conventional gel EEG electrodes. Fifteen healthy volunteers performed three tasks, with a 32-channel gel EEG system and a 32-channel dry EEG system: the 40 Hz Auditory Steady-State Response (ASSR), the checkerboard paradigm, and an eyes open/closed task. Within-subject analyses were performed to compare the signal quality in the time, frequency, and spatial domains. The results showed strong similarities between the two systems in the time and frequency domains, with strong correlations of the visual (ρ = 0.89) and auditory evoked potential (ρ = 0.81), and moderate to strong correlations for the alpha band during eye closure (ρ = 0.81–0.86) and the 40 Hz-ASSR power (ρ = 0.66–0.72), respectively. However, delta and theta band power was significantly increased, and the signal-to-noise ratio was significantly decreased for the dry EEG system. Topographical distributions were comparable for both systems. Moreover, the application time of the dry EEG system was significantly shorter (8 min). It can be concluded that the soft, multipin dry EEG system can be used in brain activity research with similar accuracy as conventional gel electrodes.
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Affiliation(s)
- Janne J.A. Heijs
- TechMed Centre, Department of Biomedical Signals and Systems, University of Twente, 7522 NB Enschede, The Netherlands; or (T.H.)
- Correspondence:
| | - Ruben Jan Havelaar
- Donders Centre for Neuroscience, Department of Biophysics, Radboud University, 6525 AJ Nijmegen, The Netherlands;
| | - Patrique Fiedler
- Institute of Biomedical Engineering and Informatics, Technische Universität Ilmenau, 98693 Ilmenau, Germany;
| | - Richard J.A. van Wezel
- TechMed Centre, Department of Biomedical Signals and Systems, University of Twente, 7522 NB Enschede, The Netherlands; or (T.H.)
- Donders Centre for Neuroscience, Department of Biophysics, Radboud University, 6525 AJ Nijmegen, The Netherlands;
| | - Tjitske Heida
- TechMed Centre, Department of Biomedical Signals and Systems, University of Twente, 7522 NB Enschede, The Netherlands; or (T.H.)
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Tamburro G, Croce P, Zappasodi F, Comani S. Automated Detection and Removal of Cardiac and Pulse Interferences from Neonatal EEG Signals. SENSORS (BASEL, SWITZERLAND) 2021; 21:6364. [PMID: 34640681 PMCID: PMC8512476 DOI: 10.3390/s21196364] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Revised: 09/10/2021] [Accepted: 09/20/2021] [Indexed: 12/03/2022]
Abstract
Electrical cardiac and pulsatile interference is very difficult to remove from electroencephalographic (EEG) signals, especially if recorded in neonates, for which a small number of EEG channels is used. Several methods were proposed, including Blind Source Separation (BSS) methods that required the use of artificial cardiac-related signals to improve the separation of artefactual components. To optimize the separation of cardiac-related artefactual components, we propose a method based on Independent Component Analysis (ICA) that exploits specific features of the real electrocardiographic (ECG) signals that were simultaneously recorded with the neonatal EEG. A total of forty EEG segments from 19-channel neonatal EEG recordings with and without seizures were used to test and validate the performance of our method. We observed a significant reduction in the number of independent components (ICs) containing cardiac-related interferences, with a consequent improvement in the automated classification of the separated ICs. The comparison with the expert labeling of the ICs separately containing electrical cardiac and pulsatile interference led to an accuracy = 0.99, a false omission rate = 0.01 and a sensitivity = 0.93, outperforming existing methods. Furthermore, we verified that true brain activity was preserved in neonatal EEG signals reconstructed after the removal of artefactual ICs, demonstrating the effectiveness of our method and its safe applicability in a clinical context.
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Affiliation(s)
- Gabriella Tamburro
- Behavioral Imaging and Neural Dynamics Center, G. d’Annunzio University of Chieti–Pescara, 66100 Chieti, Italy;
- Department of Neuroscience, Imaging and Clinical Sciences, G. d’Annunzio University of Chieti–Pescara, 66100 Chieti, Italy; (P.C.); (F.Z.)
| | - Pierpaolo Croce
- Department of Neuroscience, Imaging and Clinical Sciences, G. d’Annunzio University of Chieti–Pescara, 66100 Chieti, Italy; (P.C.); (F.Z.)
| | - Filippo Zappasodi
- Department of Neuroscience, Imaging and Clinical Sciences, G. d’Annunzio University of Chieti–Pescara, 66100 Chieti, Italy; (P.C.); (F.Z.)
- Institute for Advanced Biomedical Technologies, G. d’Annunzio University of Chieti–Pescara, 66100 Chieti, Italy
| | - Silvia Comani
- Behavioral Imaging and Neural Dynamics Center, G. d’Annunzio University of Chieti–Pescara, 66100 Chieti, Italy;
- Department of Neuroscience, Imaging and Clinical Sciences, G. d’Annunzio University of Chieti–Pescara, 66100 Chieti, Italy; (P.C.); (F.Z.)
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15
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Bisht A, Singh P, Kaur C, Agarwal S, Ajmani M. Progress and Challenges in Physiological Artifacts' Detection in Electroencephalographic Readings. Curr Med Imaging 2021; 18:509-531. [PMID: 34503420 DOI: 10.2174/1573405617666210908124704] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2020] [Revised: 05/04/2021] [Accepted: 06/08/2021] [Indexed: 11/22/2022]
Abstract
BACKGROUND Electroencephalographic (EEG) recordings are used to trace neural activity within the cortex to study brain functioning over time. INTRODUCTION During data acquisition, the unequivocal way to reduce artifact is to avoid artifact stimulating events. Though there are certain artifacts that make this task challenging due to their association with the internal human mechanism, in the human-computer interface, these physiological artifacts are of great assistance and act as a command signal for controlling a device or an application (communication). That is why pre-processing of electroencephalographic readings has been a progressive area of exploration, as none of the published work can be viewed as a benchmark for constructive artifact handling. METHOD This review offers a comprehensive insight into state of the art physiological artifact removal techniques listed so far. The study commences from the single-stage traditional techniques to the multistage techniques, examining the pros and cons of each discussed technique. Also, this review paper gives a general idea of various datasets available and briefs the topical trend in EEG signal processing. RESULT Comparing the state of the art techniques with hybrid ones on the basis of performance and computational complexity, it has been observed that the single-channel techniques save computational time but lack in effective artifact removal especially physiological artifacts. On the other hand, hybrid techniques merge the essential characteristics resulting in increased performance, but time consumption and complexity remain an issue. CONCLUSION Considering the high probability of the presence of multiple artifacts in EEG channels, a trade-off between performance, time and computational complexity is the only key for effective processing of artifacts in the time ahead. This paper is anticipated to facilitate upcoming researchers in enriching the contemporary artifact handling techniques to mitigate the expert's burden.
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Affiliation(s)
- Amandeep Bisht
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
| | - Preeti Singh
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
| | - Chamandeep Kaur
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
| | - Sunil Agarwal
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
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16
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Ojeda A, Kreutz-Delgado K, Mishra J. Bridging M/EEG Source Imaging and Independent Component Analysis Frameworks Using Biologically Inspired Sparsity Priors. Neural Comput 2021; 33:2408-2438. [PMID: 34412115 DOI: 10.1162/neco_a_01415] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Accepted: 03/24/2021] [Indexed: 11/04/2022]
Abstract
Electromagnetic source imaging (ESI) and independent component analysis (ICA) are two popular and apparently dissimilar frameworks for M/EEG analysis. This letter shows that the two frameworks can be linked by choosing biologically inspired source sparsity priors. We demonstrate that ESI carried out by the sparse Bayesian learning (SBL) algorithm yields source configurations composed of a few active regions that are also maximally independent from one another. In addition, we extend the standard SBL approach to source imaging in two important directions. First, we augment the generative model of M/EEG to include artifactual sources. Second, we modify SBL to allow for efficient model inversion with sequential data. We refer to this new algorithm as recursive SBL (RSBL), a source estimation filter with potential for online and offline imaging applications. We use simulated data to verify that RSBL can accurately estimate and demix cortical and artifactual sources under different noise conditions. Finally, we show that on real error-related EEG data, RSBL can yield single-trial source estimates in agreement with the experimental literature. Overall, by demonstrating that ESI can produce maximally independent sources while simultaneously localizing them in cortical space, we bridge the gap between the ESI and ICA frameworks for M/EEG analysis.
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Affiliation(s)
- Alejandro Ojeda
- Neural Engineering and Translation Labs, Department of Psychiatry, and Department of Electrical and Computer Engineering, University of California San Diego, La Jolla, CA 92093 U.S.A. alejo.ojeda83@gmail dot com
| | - Kenneth Kreutz-Delgado
- Department of Electrical and Computer Engineering, University of California San Diego, La Jolla, CA 92093 U.S.A.
| | - Jyoti Mishra
- Neural Engineering and Translation Labs, Department of Psychiatry, University of California San Diego, CA 92093, U.S.A.
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17
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Jamil Z, Jamil A, Majid M. Artifact removal from EEG signals recorded in non-restricted environment. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2021.03.009] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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18
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Tamburro G, Croce P, Zappasodi F, Comani S. Is Brain Dynamics Preserved in the EEG After Automated Artifact Removal? A Validation of the Fingerprint Method and the Automatic Removal of Cardiac Interference Approach Based on Microstate Analysis. Front Neurosci 2021; 14:577160. [PMID: 33510607 PMCID: PMC7835728 DOI: 10.3389/fnins.2020.577160] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2020] [Accepted: 12/10/2020] [Indexed: 12/13/2022] Open
Abstract
The assessment of a method for removing artifacts from electroencephalography (EEG) datasets often disregard verifying that global brain dynamics is preserved. In this study, we verified that the recently introduced optimized fingerprint method and the automatic removal of cardiac interference (ARCI) approach not only remove physiological artifacts from EEG recordings but also preserve global brain dynamics, as assessed with a new approach based on microstate analysis. We recorded EEG activity with a high-resolution EEG system during two resting-state conditions (eyes open, 25 volunteers, and eyes closed, 26 volunteers) known to exhibit different brain dynamics. After signal decomposition by independent component analysis (ICA), the independent components (ICs) related to eyeblinks, eye movements, myogenic interference, and cardiac electromechanical activity were identified with the optimized fingerprint method and ARCI approach and statistically compared with the outcome of the expert classification of the ICs by visual inspection. Brain dynamics in two different groups of denoised EEG signals, reconstructed after having removed the artifactual ICs identified by either visual inspection or the automated methods, was assessed by calculating microstate topographies, microstate metrics (duration, occurrence, and coverage), and directional predominance (based on transition probabilities). No statistically significant differences between the expert and the automated classification of the artifactual ICs were found (p > 0.05). Cronbach’s α values assessed the high test–retest reliability of microstate parameters for EEG datasets denoised by the automated procedure. The total EEG signal variance explained by the sets of global microstate templates was about 80% for all denoised EEG datasets, with no significant differences between groups. For the differently denoised EEG datasets in the two recording conditions, we found that the global microstate templates and the sequences of global microstates were very similar (p < 0.01). Descriptive statistics and Cronbach’s α of microstate metrics highlighted no significant differences and excellent consistency between groups (p > 0.5). These results confirm the ability of the optimized fingerprint method and the ARCI approach to effectively remove physiological artifacts from EEG recordings while preserving global brain dynamics. They also suggest that microstate analysis could represent a novel approach for assessing the ability of an EEG denoising method to remove artifacts without altering brain dynamics.
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Affiliation(s)
- Gabriella Tamburro
- Department of Neuroscience, Imaging and Clinical Sciences, University "G. d'Annunzio" of Chieti-Pescara, Chieti, Italy.,BIND-Behavioral Imaging and Neural Dynamics Center, University "G. d'Annunzio" of Chieti-Pescara, Chieti, Italy
| | - Pierpaolo Croce
- Department of Neuroscience, Imaging and Clinical Sciences, University "G. d'Annunzio" of Chieti-Pescara, Chieti, Italy
| | - Filippo Zappasodi
- Department of Neuroscience, Imaging and Clinical Sciences, University "G. d'Annunzio" of Chieti-Pescara, Chieti, Italy.,Institute for Advanced Biomedical Technologies, University "G. d'Annunzio" of Chieti-Pescara, Chieti, Italy
| | - Silvia Comani
- Department of Neuroscience, Imaging and Clinical Sciences, University "G. d'Annunzio" of Chieti-Pescara, Chieti, Italy.,BIND-Behavioral Imaging and Neural Dynamics Center, University "G. d'Annunzio" of Chieti-Pescara, Chieti, Italy
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19
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Dora C, Biswal PK. An improved algorithm for efficient ocular artifact suppression from frontal EEG electrodes using VMD. Biocybern Biomed Eng 2020. [DOI: 10.1016/j.bbe.2019.03.002] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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20
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Pion-Tonachini L, Kreutz-Delgado K, Makeig S. ICLabel: An automated electroencephalographic independent component classifier, dataset, and website. Neuroimage 2019; 198:181-197. [PMID: 31103785 DOI: 10.1016/j.neuroimage.2019.05.026] [Citation(s) in RCA: 658] [Impact Index Per Article: 131.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2019] [Revised: 04/19/2019] [Accepted: 05/10/2019] [Indexed: 11/15/2022] Open
Abstract
The electroencephalogram (EEG) provides a non-invasive, minimally restrictive, and relatively low-cost measure of mesoscale brain dynamics with high temporal resolution. Although signals recorded in parallel by multiple, near-adjacent EEG scalp electrode channels are highly-correlated and combine signals from many different sources, biological and non-biological, independent component analysis (ICA) has been shown to isolate the various source generator processes underlying those recordings. Independent components (IC) found by ICA decomposition can be manually inspected, selected, and interpreted, but doing so requires both time and practice as ICs have no order or intrinsic interpretations and therefore require further study of their properties. Alternatively, sufficiently-accurate automated IC classifiers can be used to classify ICs into broad source categories, speeding the analysis of EEG studies with many subjects and enabling the use of ICA decomposition in near-real-time applications. While many such classifiers have been proposed recently, this work presents the ICLabel project comprised of (1) the ICLabel dataset containing spatiotemporal measures for over 200,000 ICs from more than 6000 EEG recordings and matching component labels for over 6000 of those ICs, all using common average reference, (2) the ICLabel website for collecting crowdsourced IC labels and educating EEG researchers and practitioners about IC interpretation, and (3) the automated ICLabel classifier, freely available for MATLAB. The ICLabel classifier improves upon existing methods in two ways: by improving the accuracy of the computed label estimates and by enhancing its computational efficiency. The classifier outperforms or performs comparably to the previous best publicly available automated IC component classification method for all measured IC categories while computing those labels ten times faster than that classifier as shown by a systematic comparison against other publicly available EEG IC classifiers.
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Affiliation(s)
- Luca Pion-Tonachini
- Swartz Center for Computational Neuroscience, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA; Department of Electrical and Computer Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA.
| | - Ken Kreutz-Delgado
- Department of Electrical and Computer Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA; Pattern Recognition Laboratory, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA.
| | - Scott Makeig
- Swartz Center for Computational Neuroscience, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA.
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21
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Tamburro G, Stone DB, Comani S. Automatic Removal of Cardiac Interference (ARCI): A New Approach for EEG Data. Front Neurosci 2019; 13:441. [PMID: 31133785 PMCID: PMC6517508 DOI: 10.3389/fnins.2019.00441] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Accepted: 04/17/2019] [Indexed: 11/18/2022] Open
Abstract
EEG recordings are generally affected by interference from physiological and non-physiological sources which may obscure underlying brain activity and hinder effective EEG analysis. In particular, cardiac interference can be caused by the electrical activity of the heart and/or cardiovascular activity related to blood flow. Successful EEG application in sports science settings requires a method for artifact removal that is automatic and flexible enough to be applied in a variety of acquisition conditions without requiring simultaneous ECG recordings that could restrict movement. We developed an automatic method for classifying and removing both electrical cardiac and cardiovascular artifacts (ARCI) that does not require additional ECG recording. Our method employs independent component analysis (ICA) to isolate data independent components (ICs) and identifies the artifactual ICs by evaluating specific IC features in the time and frequency domains. We applied ARCI to EEG datasets with cued artifacts and acquired during an eyes-closed condition. Data were recorded using a standard EEG wet cap with either 128 or 64 electrodes and using a novel dry electrode cap with either 97 or 64 dry electrodes. All data were decomposed into different numbers of components to evaluate the effect of ICA decomposition level on effective cardiac artifact detection. ARCI performance was evaluated by comparing automatic ICs classifications with classifications performed by experienced investigators. Automatic and investigator classifications were highly consistent resulting in an overall accuracy greater than 99% in all datasets and decomposition levels, and an average sensitivity greater than 90%. Best results were attained when data were decomposed into a fewer number of components where the method achieved perfect sensitivity (100%). Performance was also evaluated by comparing automatic component classification with externally recorded ECG. Results showed that ICs automatically classified as artifactual were significantly correlated with ECG activity whereas the other ICs were not. We also assessed that the interference affecting EEG signals was reduced by more than 82% after automatic artifact removal. Overall, ARCI represents a significant step in the detection and removal of cardiac-related EEG artifacts and can be applied in a variety of acquisition settings making it ideal for sports science applications.
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Affiliation(s)
- Gabriella Tamburro
- BIND – Behavioral Imaging and Neural Dynamics Center, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
- Department of Neuroscience, Imaging and Clinical Sciences, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
| | - David B. Stone
- BIND – Behavioral Imaging and Neural Dynamics Center, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
- Department of Neuroscience, Imaging and Clinical Sciences, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
| | - Silvia Comani
- BIND – Behavioral Imaging and Neural Dynamics Center, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
- Department of Neuroscience, Imaging and Clinical Sciences, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
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22
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Blum S, Jacobsen NSJ, Bleichner MG, Debener S. A Riemannian Modification of Artifact Subspace Reconstruction for EEG Artifact Handling. Front Hum Neurosci 2019; 13:141. [PMID: 31105543 PMCID: PMC6499032 DOI: 10.3389/fnhum.2019.00141] [Citation(s) in RCA: 71] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2018] [Accepted: 04/11/2019] [Indexed: 11/13/2022] Open
Abstract
Artifact Subspace Reconstruction (ASR) is an adaptive method for the online or offline correction of artifacts comprising multichannel electroencephalography (EEG) recordings. It repeatedly computes a principal component analysis (PCA) on covariance matrices to detect artifacts based on their statistical properties in the component subspace. We adapted the existing ASR implementation by using Riemannian geometry for covariance matrix processing. EEG data that were recorded on smartphone in both outdoors and indoors conditions were used for evaluation (N = 27). A direct comparison between the original ASR and Riemannian ASR (rASR) was conducted for three performance measures: reduction of eye-blinks (sensitivity), improvement of visual-evoked potentials (VEPs) (specificity), and computation time (efficiency). Compared to ASR, our rASR algorithm performed favorably on all three measures. We conclude that rASR is suitable for the offline and online correction of multichannel EEG data acquired in laboratory and in field conditions.
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Affiliation(s)
- Sarah Blum
- Neuropsychology Lab, Department of Psychology, European Medical School, Carl von Ossietzky University of Oldenburg, Oldenburg, Germany
| | - Nadine S J Jacobsen
- Neuropsychology Lab, Department of Psychology, European Medical School, Carl von Ossietzky University of Oldenburg, Oldenburg, Germany
| | - Martin G Bleichner
- Neuropsychology Lab, Department of Psychology, European Medical School, Carl von Ossietzky University of Oldenburg, Oldenburg, Germany
| | - Stefan Debener
- Neuropsychology Lab, Department of Psychology, European Medical School, Carl von Ossietzky University of Oldenburg, Oldenburg, Germany
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23
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Jiang X, Bian GB, Tian Z. Removal of Artifacts from EEG Signals: A Review. SENSORS (BASEL, SWITZERLAND) 2019; 19:E987. [PMID: 30813520 PMCID: PMC6427454 DOI: 10.3390/s19050987] [Citation(s) in RCA: 198] [Impact Index Per Article: 39.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/15/2018] [Revised: 02/03/2019] [Accepted: 02/21/2019] [Indexed: 11/28/2022]
Abstract
Electroencephalogram (EEG) plays an important role in identifying brain activity and behavior. However, the recorded electrical activity always be contaminated with artifacts and then affect the analysis of EEG signal. Hence, it is essential to develop methods to effectively detect and extract the clean EEG data during encephalogram recordings. Several methods have been proposed to remove artifacts, but the research on artifact removal continues to be an open problem. This paper tends to review the current artifact removal of various contaminations. We first discuss the characteristics of EEG data and the types of different artifacts. Then, a general overview of the state-of-the-art methods and their detail analysis are presented. Lastly, a comparative analysis is provided for choosing a suitable methods according to particular application.
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Affiliation(s)
- Xiao Jiang
- Institute of Automation, Chinese Academy of Science, Beijing 100190, China.
- School of Big Data and Information Engineering, Guizhou University, Guiyang 550025, China.
| | - Gui-Bin Bian
- Institute of Automation, Chinese Academy of Science, Beijing 100190, China.
| | - Zean Tian
- School of Big Data and Information Engineering, Guizhou University, Guiyang 550025, China.
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24
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di Fronso S, Tamburro G, Robazza C, Bortoli L, Comani S, Bertollo M. Focusing Attention on Muscle Exertion Increases EEG Coherence in an Endurance Cycling Task. Front Psychol 2018; 9:1249. [PMID: 30079045 PMCID: PMC6063037 DOI: 10.3389/fpsyg.2018.01249] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Accepted: 06/29/2018] [Indexed: 12/31/2022] Open
Abstract
The aim of this study was to examine EEG coherence before, during, and after time to exhaustion (TTE) trials in an endurance cycling task, as well as the effect of effort level and attentional focus (i.e., functional external, functional internal, and dysfunctional internal associative strategies-leading to Type 1, Type 2, and Type 3 performances) on brain functional connectivity. Eleven college-aged participants performed the TTE test on a cycle-ergometer with simultaneous EEG and rate of perceived exertion (RPE) monitoring. EEG data from 32 electrodes were divided into five effort level periods based on RPE values (Baseline, RPE 0-4, RPE 5-8, RPE 9-MAX, and Recovery). Within subjects RM-ANOVA was conducted to examine time to task completion across Type 1, Type 2, and Type 3 performance trials. RM-ANOVA (3 performance types × 5 effort levels) was also performed to compare the EEG coherence matrices in the alpha and beta bands for 13 pairs of electrodes (F3-F4, F3-P3, F4-P4, T7-T8, T7-P3, C3-C4, C3-P3, C4-P4, T8-P4, P3-P4, P3-O1, P4-O2, O2-O1). Significant differences were observed on TTE performance outcomes between Type 1 and Type 3, and between Type 2 and Type 3 performance states (p < 0.05), whereas Type 1 and Type 2 performance states did not differ. No significant main effects were observed on performance type (p > 0.05) for all frequency bands in any pair of electrodes of the coherence matrices. Higher EEG coherence values were observed at rest (Baseline) than during cycling (RPE 0-4, 5-8, 9-MAX) for all pairs of electrodes and EEG frequency bands irrespective of the type of performance (main effect of effort, p < 0.05). Interestingly, we observed a performance × effort interaction in C3-C4 in beta 3 band [F(4, 77) = 2.62, p = 0.038] during RPE 9-MAX for Type 3 performance as compared to Type 1 and Type 2 performances. These findings may have practical implications in the development of performance optimization strategies in cycling, as we found that focusing attention on a core component of the action could stimulate functional connectivity among specific brain areas and lead to enhanced performance.
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Affiliation(s)
- Selenia di Fronso
- BIND-Behavioral Imaging and Neural Dynamics Center, Department of Medicine and Aging Sciences, "G. d'Annunzio" University of Chieti-Pescara, Chieti, Italy
| | - Gabriella Tamburro
- BIND-Behavioral Imaging and Neural Dynamics Center, Department of Medicine and Aging Sciences, "G. d'Annunzio" University of Chieti-Pescara, Chieti, Italy
| | - Claudio Robazza
- BIND-Behavioral Imaging and Neural Dynamics Center, Department of Medicine and Aging Sciences, "G. d'Annunzio" University of Chieti-Pescara, Chieti, Italy
| | - Laura Bortoli
- BIND-Behavioral Imaging and Neural Dynamics Center, Department of Medicine and Aging Sciences, "G. d'Annunzio" University of Chieti-Pescara, Chieti, Italy
| | - Silvia Comani
- BIND-Behavioral Imaging and Neural Dynamics Center, Department of Medicine and Aging Sciences, "G. d'Annunzio" University of Chieti-Pescara, Chieti, Italy
| | - Maurizio Bertollo
- BIND-Behavioral Imaging and Neural Dynamics Center, Department of Medicine and Aging Sciences, "G. d'Annunzio" University of Chieti-Pescara, Chieti, Italy
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25
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Stone DB, Tamburro G, Fiedler P, Haueisen J, Comani S. Automatic Removal of Physiological Artifacts in EEG: The Optimized Fingerprint Method for Sports Science Applications. Front Hum Neurosci 2018; 12:96. [PMID: 29618975 PMCID: PMC5871683 DOI: 10.3389/fnhum.2018.00096] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2017] [Accepted: 02/27/2018] [Indexed: 11/13/2022] Open
Abstract
Data contamination due to physiological artifacts such as those generated by eyeblinks, eye movements, and muscle activity continues to be a central concern in the acquisition and analysis of electroencephalographic (EEG) data. This issue is further compounded in EEG sports science applications where the presence of artifacts is notoriously difficult to control because behaviors that generate these interferences are often the behaviors under investigation. Therefore, there is a need to develop effective and efficient methods to identify physiological artifacts in EEG recordings during sports applications so that they can be isolated from cerebral activity related to the activities of interest. We have developed an EEG artifact detection model, the Fingerprint Method, which identifies different spatial, temporal, spectral, and statistical features indicative of physiological artifacts and uses these features to automatically classify artifactual independent components in EEG based on a machine leaning approach. Here, we optimized our method using artifact-rich training data and a procedure to determine which features were best suited to identify eyeblinks, eye movements, and muscle artifacts. We then applied our model to an experimental dataset collected during endurance cycling. Results reveal that unique sets of features are suitable for the detection of distinct types of artifacts and that the Optimized Fingerprint Method was able to correctly identify over 90% of the artifactual components with physiological origin present in the experimental data. These results represent a significant advancement in the search for effective means to address artifact contamination in EEG sports science applications.
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Affiliation(s)
- David B Stone
- Department of Neuroscience, Imaging and Clinical Sciences, Behavioral Imaging and Neural Dynamics Center, Università degli Studi G. d'Annunzio Chieti e Pescara, Chieti, Italy
| | - Gabriella Tamburro
- Department of Neuroscience, Imaging and Clinical Sciences, Behavioral Imaging and Neural Dynamics Center, Università degli Studi G. d'Annunzio Chieti e Pescara, Chieti, Italy
| | - Patrique Fiedler
- Institute of Biomedical Engineering and Informatics, Technische Universität Ilmenau, Ilmenau, Germany
| | - Jens Haueisen
- Institute of Biomedical Engineering and Informatics, Technische Universität Ilmenau, Ilmenau, Germany
| | - Silvia Comani
- Department of Neuroscience, Imaging and Clinical Sciences, Behavioral Imaging and Neural Dynamics Center, Università degli Studi G. d'Annunzio Chieti e Pescara, Chieti, Italy
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