Soil and forest structure predicts large-scale patterns of occurrence and local abundance of a widespread Amazonian frog

Determinants of anuran assemblages in Amazonian White-sand Ecosystems

Amazonian white-sand ecosystems have predominantly sandy soils and a high amount of endemism, and several species found within them are adapted to long periods of drought. However, little is known about the variation in the structure of anuran assemblages in these ecosystems. Considering that most species are not uniformly distributed in heterogeneous landscapes, we tested the hypothesis that anuran assemblage variation in white-sand ecosystems is related to changes in vegetation structure. Specifically, we focused on a heterogeneous patch of white-sand ecosystems of the central Amazon and evaluated whether vegetation structure and soil characteristics, including root depth, influence the richness, abundance, and composition of anuran assemblages. Our results showed that low amounts of clay in the soil play an important role in structuring vegetation in these ecosystems, and these are the main factors that organize anuran assemblages. The Campinaranas close to the water bodies have a high species richness, while Campina landscapes limit the occupation of most of species. Our findings indicate that anurans undergo environmental filtering in white-sand ecosystems and are organized into hierarchical subgroups, in which only species with specialized reproduction can successfully occupy the most water-restricted environments.

The Influence of Environmental Variation on the Genetic Structure of a Poison Frog Distributed Across Continuous Amazonian Rainforest

Biogeographic barriers such as rivers have been shown to shape spatial patterns of biodiversity in the Amazon basin, yet relatively little is known about the distribution of genetic variation across continuous rainforest. Here, we characterize the genetic structure of the brilliant-thighed poison frog (Allobates femoralis) across an 880-km-long transect along the Purus-Madeira interfluve south of the Amazon river, based on 64 individuals genotyped at 7609 single-nucleotide polymorphism (SNP) loci. A population tree and clustering analyses revealed 4 distinct genetic groups, one of which was strongly divergent. These genetic groups were concomitant with femoral spot coloration differences, which was intermediate within a zone of admixture between two of the groups. The location of these genetic groups did not consistently correspond to current ecological transitions between major forest types. A multimodel approach to quantify the relative influence of isolation-by-geographic distance (IBD) and isolation-by-environmental resistance (IBR) nevertheless revealed that, in addition to a strong signal of IBD, spatial genetic differentiation was explained by IBR primarily linked to dry season intensity (r2 = 8.4%) and canopy cover (r2 = 6.4%). We show significant phylogenetic divergence in the absence of obvious biogeographical barriers and that finer-scaled measures of genetic structure are associated with environmental variables also known to predict the density of A. femoralis.

The evolution of polymorphism in the warning coloration of the Amazonian poison frog Adelphobates galactonotus

While intraspecific variation in aposematic signals can be selected for by different predatory responses, their evolution is also contingent on other processes shaping genetic variation. We evaluate the relative contributions of selection, geographic isolation, and random genetic drift to the evolution of aposematic color polymorphism in the poison frog Adelphobates galactonotus, distributed throughout eastern Brazilian Amazonia. Dorsal coloration was measured for 111 individuals and genetic data were obtained from 220 individuals at two mitochondrial genes (mtDNA) and 7963 Single Nucleotide Polymorphisms (SNPs). Four color categories were described (brown, blue, yellow, orange) and our models of frog and bird visual systems indicated that each color was distinguishable for these taxa. Using outlier and correlative analyses we found no compelling genetic evidence for color being under divergent selection. A time-calibrated mtDNA tree suggests that the present distribution of dorsal coloration resulted from processes occurring during the Pleistocene. Separate phylogenies based on SNPs and mtDNA resolved the same well supported clades, each containing different colored populations. Ancestral character state analysis provided some evidence for evolutionary transitions in color type. Genetic structure was more strongly associated with geographic features, than color category, suggesting that the distribution of color is explained by localized processes. Evidence for geographic isolation together with estimates of low effective population size implicates drift as playing a key role in color diversification. Our results highlight the relevance of considering the neutral processes involved with the evolution of traits with important fitness consequences.

Richness and composition of anuran assemblages from an Amazonian savanna

The Amazonian savannas occupy approximately 150,000 km2 of the Brazilian Amazon, occurring in scattered isolated patches over large areas of forest in the states of Amapá, Amazonas, Pará, Roraima and Rondônia. Despite having considerable variation in the Anuran composition between locations and between the savanna's physiognomies, a systematic and geographically wide sampling has not been performed for the savanna from Amapá yet, located in the north of Brazil, eastern Amazonia. In this perspective, a study was conducted on the richness, composition, diversity, and abundance of Anuran species in a ​​savanna area in Amapá State. For Anuran sampling, we performed 24 samples in four physiognomies (grassland savanna, scrub grassland savanna, parkland savanna, open woodland savanna) through an active and auditory search more than 20 sampling plots of 100 × 50 meters in each physiognomy. Twenty-one (21) species of frogs belonging to five families were registered: Bufonidae, Hylidae, Leptodactylidae, Microhylidae and Phyllomedusidae. Scrub grassland savanna registered a greater number of individuals regarding the species richness by physiognomy. The species rarefaction curve for the total area reached an asymptote, suggesting that the data collection effort was enough to adequately sample the species richness of the area. The Kruskal-Wallis variance analysis revealed significant differences in the species richness and diversity among the physiognomies. The Bray-Curtis similarity analysis grouped the physiognomies into three main groups: open woodland savanna, grassland savanna and scrub grassland savanna and parkland savanna. Through ordering by non-metric multidimensional scaling, the species composition from the savanna anuran assemblage resulted in a separation among three sampled physiognomies with significant differences, indicating differences in assemblage composition of the three sampled physiognomies. The local richness (21 species) corresponds to 14% of the 15 typical species that have strongly associated distribution with the Cerrado from Central Brazil, and 35.6% of 59 typical species of neighboring domains which only marginally occur in the Cerrado, representing a considerable part of frog species richness recorded in the savanna in the eastern portion of the Brazilian Amazon.