Manure application increased denitrifying gene abundance in a drip-irrigated cotton field

The Effects of N Enrichment on Microbial Cycling of Non-CO2 Greenhouse Gases in Soils-a Review and a Meta-analysis

Terrestrial ecosystems are typically nitrogen (N) limited, but recent years have witnessed N enrichment in various soil ecosystems caused by human activities such as fossil fuel combustion and fertilizer application. This enrichment may alter microbial processes in soils in a way that would increase the emissions of methane (CH₄) and nitrous oxide (N₂O), thereby aggravating global climate change. This review focuses on the effects of N enrichment on methanogens and methanotrophs, which play a central role in the dynamics of CH₄ at the global scale. We also address the effects of N enrichment on N₂O, which is produced in soils mainly by nitrification and denitrification. Overall, N enrichment inhibits methanogenesis in pure culture experiments, while its effects on CH₄ oxidation are more complicated. The majority of previous studies reported that N enrichment, especially NH₄⁺ enrichment, inhibits CH₄ oxidation, resulting in higher CH₄ emissions from soils. However, both activation and neutral responses have also been reported, particularly in rice paddies and landfill sites, which is well reflected in our meta-analysis. In contrast, N enrichment substantially increases N₂O emission by both nitrification and denitrification, which increases proportionally to the amount of N amended. Future studies should address the effects of N enrichment on the active microbes of those functional groups at multiple scales along with parameterization of microbial communities for the application to climate models at the global scale.

Linking soil profile N2O concentration with surface flux in a cotton field under drip fertigation

It remains unclear how the source and rate of nitrogen (N) fertilizers affect N₂O concentration and effluxes along the soil profile under the drip-fertigated agricultural system. A plot-based field study was performed in 2017 and 2018 in a cotton field in arid northwestern China, with an objective to elucidate the impact of the applications of conventional urea (Urea), polymer-coated urea (ESN) and stabilized urea (SuperU) at rates of 120 and 240 kg N ha^-1 on concentration and efflux of N₂O in the soil profile and its relationship with N₂O surface emissions. The in-situ N₂O concentrations at soil depths of 5, 15, 30 and 60 cm were measured and used to estimate soil profile N₂O effluxes. Estimates of surface N₂O flux using the concentration gradient-based (GM) were compared with those measured using the chamber-based (CM) method. In both years, soil N₂O concentrations at all depths increased in response to basal N application at planting or in-season fertigation events. However, N rate or source did not affect soil N₂O concentrations or effluxes at each depth. Surface emissions of N₂O were mostly associated with that presented in the top layer of 0-15 cm. Surface N₂O efflux determined by GM was poorly or not associated with those of chamber measurements, which was attributed to the low N₂O production restricted by soil moisture condition under the drip-fertigated condition. These results highlight the challenge of applying the enhanced efficiency N fertilizer products in the drip-fertigated agricultural system.

Coupling Between the Responses of Plants, Soil, and Microorganisms Following Grazing Exclusion in an Overgrazed Grassland

Grazing exclusion is an effective management practice to restore grassland ecosystem functioning. However, little is known about the role of soil microbial communities in regulating grassland ecosystem functioning during long-term ecosystem restorations. We evaluated the recovery of a degraded semiarid grassland ecosystem in northern China by investigating plant and soil characteristics and the role of soil microbial communities in ecosystem functioning after 22 years of grazing exclusion. Grazing exclusion significantly increased the alpha diversity and changed the community structure of bacteria, but did not significantly affect the alpha diversity or community structure of fungi. The higher abundance of copiotrophic Proteobacteria and Bacteroidetes with grazing exclusion was due to the higher carbon and nutrient concentrations in the soil, whereas the high abundance of Acidobacteria in overgrazed soils was likely an adaptation to the poor environmental conditions. Bacteria of the Sphingomonadaceae family were associated with C cycling under grazing exclusion. Bacteria of the Nitrospiraceae family, and especially of the Nitrospira genus, played an important role in changes to the N cycle under long-term exclusion of grazing. Quantitative PCR further revealed that grazing exclusion significantly increased the abundance of nitrogen fixing bacteria (nifH), ammonia oxidizers (AOA and AOB), and denitrifying bacteria (nirK and nosZ1). Denitrifying enzyme activity (DEA) was positively correlated with abundance of denitrifying bacteria. The increase in DEA under grazing exclusion suggests that the dependence of DEA on the availability of NO₃ ^- produced is due to the combined activity of ammonia oxidizers and denitrifiers. Our findings indicate that decades-long grazing exclusion can trigger changes in the soil bacterial diversity and composition, thus modulating the restoration of grassland ecosystem functions, carbon sequestration and soil fertility.

Interactive impacts of boron and organic amendments in plant-soil microbial relationships

Water shortage and low organic carbon content in soil limit soil fertility and crop productivity. The use of desalinated seawater is increasing as an alternative source of irrigation water. However, it has a high boron (B) content that could cause toxicity in the plant-soil microbial system. Here, we evaluated the responses of the soil microbiota and lemon trees to 3 irrigation B doses (0.3, 1, and 15 mg L^-1) under two types of soil management (conventional, CS; and organic, OS) in a 180-days pot experiment. High B doses promoted B accumulation in soil, reaching harmful concentrations that affected soil biodiversity. Our results suggest a close interaction between B and organic labile fractions that increased B availability in soil solution. Besides, B addition to soil impacted on microbial biomass. The bacterial community showed sensitivity to the B dose. Organic amendment did not increase B soil adsorption but it favored B plant uptake. The highest B dose had a detrimental impact on plant physiology, finally resulting lethal for the plants. Our study provides a comprehensive assessment of the microbes-plant interactions in soils irrigated with water with high B content. This will be fundamental in the design of future fertirrigation strategies.

Enhanced efficiency nitrogen fertilizers were not effective in reducing N2O emissions from a drip-irrigated cotton field in arid region of Northwestern China

Drip irrigation is an effective water-saving strategy for crop production in arid regions. However, limited information is available on how fertilizer nitrogen (N) management affects soil nitrous oxide (N₂O) emission under drip irrigation. A two-year (2017-2018) field experiment was conducted in arid northwestern China to test management options of fertilizer N to reduce N₂O emission and improve NUE of cotton (Gossypium hirsutum L.) under drip irrigation. Treatment included a factorial design of rate (120, 240 kg N ha^-1) and source of N fertilizer (Urea, polymer-coated urea-ESN, stabilized urea with nitrification and urease inhibitors-SuperU), and an unfertilized Control. Urea was split-applied with irrigation water (fertigation) whereas ESN and SuperU were all side-banded at pre-plant. Crop yield and N uptake, soil mineral N concentrations, soil temperature and moisture, and N₂O fluxes were determined. Across the two growing seasons, a single pre-plant application with ESN or SuperU significantly increased growing season cumulative N₂O emissions (ƩN₂O) by 29-47% and applied N-scaled emission factor (EF) by 57-83% compared to urea fertigation, irrespectively of application rate. In contrast, cotton yield, agronomic NUE, apparent N recovery (ANR), and yield-based N₂O emission intensity (EI) were not affected by N source. Reducing N rate from 240 to 120 kg N ha^-1 significantly decreased ƩN₂O by 35% in 2017 and 36% in 2018 while simultaneously reduced cotton yield in both years. The increased N₂O emissions with ESN and SuperU were attributed to greater availability of inorganic N resulted from one-time application at pre-plant and higher soil temperature. We concluded that fertigation with urea at the recommended rate is the best option to ensure agronomic productively and agronomic NUE with minimal risk of N₂O emissions. In contrast, the benefit of enhanced efficiency N fertilizer is limited and recommendation on using of these products is challenging for arid croplands under drip irrigation.