1
|
Zhang M, Wang CQ, Buyck B, Deng WQ, Li TH. Multigene Phylogeny and Morphology Reveal Unexpectedly High Number of New Species of Cantharellus Subgenus Parvocantharellus (Hydnaceae, Cantharellales) in China. J Fungi (Basel) 2021; 7:jof7110919. [PMID: 34829207 PMCID: PMC8623453 DOI: 10.3390/jof7110919] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2021] [Revised: 10/24/2021] [Accepted: 10/25/2021] [Indexed: 11/16/2022] Open
Abstract
The genus Cantharellus, commonly known as chanterelles, has recently been divided into six subgenera; however, wider sampling approaches are needed to clarify the relationships within and between these groups. A phylogenetic overview of Cantharellus subgenus Parvocantharellus in China was inferred based on the large subunit nuclear ribosomal RNA gene (nrLSU), the DNA-directed RNA polymerase II subunit 2 (rpb2), and the transcription elongation factor 1-alpha (tef1). A total of nine species from China were assigned to the subgenus, including seven novel species, namely Cantharellusaurantinus, C. austrosinensis, C. galbanus, C. luteolus, C. luteovirens, C. minioalbus, and C. sinominior, and two known species, namely C. albus and C. zangii. The detailed descriptions and illustrations were provided based on the newly obtained data, with the comparisons to closely related species. C. zangii was restudied based on the paratype specimens and multiple new collections from the type locality. Futhermore, the Indian species C. sikkimensis was identified as a synonym of C. zangii based on the morphological and molecular analyses. A key to the Chinese species belonging to the subg. Parvocantharellus is also provided.
Collapse
Affiliation(s)
- Ming Zhang
- State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China; (M.Z.); (C.-Q.W.); (W.-Q.D.)
| | - Chao-Qun Wang
- State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China; (M.Z.); (C.-Q.W.); (W.-Q.D.)
| | - Bart Buyck
- Institut Systématique, Evolution, Biodiversité (ISYEB), UMR 7205, Muséum National d’Histoire Naturelle, Sorbonne Université, CNRS, Case Postale 39, 12 rue Buffon, F-75005 Paris, France;
| | - Wang-Qiu Deng
- State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China; (M.Z.); (C.-Q.W.); (W.-Q.D.)
| | - Tai-Hui Li
- State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China; (M.Z.); (C.-Q.W.); (W.-Q.D.)
- Correspondence:
| |
Collapse
|
2
|
Buyck B, Ndolo Ebika ST, De Kesel A, Hofstetter V. Tropical African Cantharellus Adans.: Fr. (Hydnaceae, Cantharellales) with Lilac-Purplish Tinges Revisited. CRYPTOGAMIE MYCOL 2020. [DOI: 10.5252/cryptogamie-mycologie2020v41a10] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Bart Buyck
- Institut de Systématique, Evolution, Biodiversité (ISYEB – UMR 7205), Muséum national d'Histoire naturelle, Sorbonne Université, CNRS, EPHE, case postale 39, 57 rue Cuvier, F-75231 Paris cedex 05 (France)
| | - Sydney T. Ndolo Ebika
- Faculté des Sciences et Techniques, Université Marien NGOUABI, 01 Avenue des Premiers Jeux Africains, B.P. 69, Brazzaville (République du Congo) and Initiative des Champignons et des Plantes du Congo (ICPC), 82 rue Oboko, B.P. 2300, Brazzaville (Répu
| | - André De Kesel
- Meise Botanic Garden, Nieuwelaan 38, BE-1860 Meise (Belgium)
| | - Valérie Hofstetter
- Department of plant protection, Agroscope Changins-Wadenswil Research Station ACW, Rte de Duiller, 1260, Nyon (Switzerland)
| |
Collapse
|
3
|
He MQ, Zhao RL, Hyde KD, Begerow D, Kemler M, Yurkov A, McKenzie EHC, Raspé O, Kakishima M, Sánchez-Ramírez S, Vellinga EC, Halling R, Papp V, Zmitrovich IV, Buyck B, Ertz D, Wijayawardene NN, Cui BK, Schoutteten N, Liu XZ, Li TH, Yao YJ, Zhu XY, Liu AQ, Li GJ, Zhang MZ, Ling ZL, Cao B, Antonín V, Boekhout T, da Silva BDB, De Crop E, Decock C, Dima B, Dutta AK, Fell JW, Geml J, Ghobad-Nejhad M, Giachini AJ, Gibertoni TB, Gorjón SP, Haelewaters D, He SH, Hodkinson BP, Horak E, Hoshino T, Justo A, Lim YW, Menolli N, Mešić A, Moncalvo JM, Mueller GM, Nagy LG, Nilsson RH, Noordeloos M, Nuytinck J, Orihara T, Ratchadawan C, Rajchenberg M, Silva-Filho AGS, Sulzbacher MA, Tkalčec Z, Valenzuela R, Verbeken A, Vizzini A, Wartchow F, Wei TZ, Weiß M, Zhao CL, Kirk PM. Notes, outline and divergence times of Basidiomycota. FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00435-4] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
AbstractThe Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to the Ascomycota. The present work provides an overview of all validly published, currently used basidiomycete genera to date in a single document. An outline of all genera of Basidiomycota is provided, which includes 1928 currently used genera names, with 1263 synonyms, which are distributed in 241 families, 68 orders, 18 classes and four subphyla. We provide brief notes for each accepted genus including information on classification, number of accepted species, type species, life mode, habitat, distribution, and sequence information. Furthermore, three phylogenetic analyses with combined LSU, SSU, 5.8s, rpb1, rpb2, and ef1 datasets for the subphyla Agaricomycotina, Pucciniomycotina and Ustilaginomycotina are conducted, respectively. Divergence time estimates are provided to the family level with 632 species from 62 orders, 168 families and 605 genera. Our study indicates that the divergence times of the subphyla in Basidiomycota are 406–430 Mya, classes are 211–383 Mya, and orders are 99–323 Mya, which are largely consistent with previous studies. In this study, all phylogenetically supported families were dated, with the families of Agaricomycotina diverging from 27–178 Mya, Pucciniomycotina from 85–222 Mya, and Ustilaginomycotina from 79–177 Mya. Divergence times as additional criterion in ranking provide additional evidence to resolve taxonomic problems in the Basidiomycota taxonomic system, and also provide a better understanding of their phylogeny and evolution.
Collapse
|
4
|
Buyck B, W Henkel T, Hofstetter V. Epitypification of the Central African Cantharellusdensifolius and C.luteopunctatus allows for the recognition of two additional species. MycoKeys 2019; 49:49-72. [PMID: 31043852 PMCID: PMC6477822 DOI: 10.3897/mycokeys.49.32034] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Accepted: 02/19/2019] [Indexed: 11/12/2022] Open
Abstract
Cantharellusdensifolius and C.luteopunctatus are epitypified on the basis of recently collected specimens from the Central African rain forest that correspond in every way to their respective original descriptions. Sequences obtained from these new collections demonstrate that both epitypes represent distinct species that belong in different subclades of Cantharellussubg.Rubrinus. Previously, the name C.densifolius has been consistently misapplied to more or less similar species from the African woodland area, including C.densilamellatus sp. nov. which is described here, In addition, C.tomentosoides sp. nov., a rain forest species that is easily confused with C.densifolius, is described.
Collapse
Affiliation(s)
- Bart Buyck
- Institut de Systematique, Evolution, Biodiversite (ISYEB - UMR 7205), Museum national d'Histoire naturelle, Sorbonne Université, CNRS, CP 39, 12 Rue Buffon, F-75005 Paris, France Sorbonne Université Paris France
| | - Terry W Henkel
- Department of Biological Sciences, Humboldt State University, Arcata, California, 95521, USA Humboldt State University Arcata United States of America
| | - Valérie Hofstetter
- Department of Plant Protection, Agroscope Changins-Wädenswil Research Station ACW, Rte De Duiller, CH-1260 Nyon 1, Switzerland Wädenswil Research Station Nyon Switzerland
| |
Collapse
|
5
|
Das K, Rossi W, Leonardi M, Ghosh A, Bera I, Hembrom ME, Bajpai R, Joseph S, Nayaka S, Upreti DK, Wang XH, Hofstetter V, Buyck B. Fungal Biodiversity Profiles 61 - 70. CRYPTOGAMIE MYCOL 2018. [DOI: 10.7872/crym/v39.iss4.2018.381] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Kanad Das
- Cryptogamic Unit, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India; emails: dask
| | - Walter Rossi
- Sect. Environmental Sciences, Dept. MeSVA, University of L'Aquila, 67100 L'Aquila, Italy; mar
| | - Marco Leonardi
- Sect. Environmental Sciences, Dept. MeSVA, University of L'Aquila, 67100 L'Aquila, Italy; mar
| | - Aniket Ghosh
- Department of Botany & Microbiology, H.N.B. Garhwal University (A Central University), Srinagar, Gar
| | - Ishika Bera
- Cryptogamic Unit, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India; emails: dask
| | - Manoj E Hembrom
- Central National Herbarium, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India; em
| | - Rajesh Bajpai
- Lichenology Laboratory, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow - 226
| | - Siljo Joseph
- Lichenology Laboratory, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow - 226
| | - Sanjeeva Nayaka
- Lichenology Laboratory, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow - 226
| | - Dalip Kumar Upreti
- Lichenology Laboratory, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow - 226
| | - Xiang-hua Wang
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chine
| | - Valérie Hofstetter
- Department of Plant Protection, Agroscope Changins-Wädenswil Research Station ACW, Rte De Duiller, C
| | - Bart Buyck
- Institut de Systématique, Évolution, Biodiversité (ISYEB-UMR7205), Sorbonne Université, Museum Natio
| |
Collapse
|
6
|
Antonín V, Hofstetter V, Ryoo R, Ka KH, Buyck B. New Cantharellus species from the Republic of Korea. Mycol Prog 2017. [DOI: 10.1007/s11557-017-1312-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
|
7
|
Buyck B, Duhem B, Das K, Jayawardena RS, Niveiro N, Pereira OL, Prasher IB, Adhikari S, Albertó EO, Bulgakov TS, Castañeda-Ruiz RF, Hembrom ME, Hyde KD, Lewis DP, Michlig A, Nuytinck J, Parihar A, Popoff OF, Ramirez NA, Silva MD, Verma RK, Hofstetter V. Fungal Biodiversity Profiles 21–30. CRYPTOGAMIE MYCOL 2017. [DOI: 10.7872/crym/v38.iss1.2017.101] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Bart Buyck
- Museum National d'Histoire Naturelle, CP 39, ISYEB, UMR 7205 CNRS MNHN UPMC EPHE, 12 Rue Buffon, F-75005 Paris, France
| | - Bernard Duhem
- Museum National d'Histoire Naturelle, UMS2700, OMSI, 16 rue Buffon, F-75005 Paris, France †
| | - Kanad Das
- Cryptogamic Unit, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Ruvishika S. Jayawardena
- Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, People's Republic of China
- Central National Herbarium, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Nicolás Niveiro
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Olinto L. Pereira
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil
| | - Indu B. Prasher
- Department of Botany, Mycology and Plant Pathology Laboratory, Panjab University Chandigarh, 160014, India
| | - Sinchan Adhikari
- Department of Botany, University of Kalyani, Kalyani 741235, Nadia, West Bengal, India
| | - Edgardo Omar Albertó
- Instituto de Investigaciones Biotecnológicas — Instituto Tecnológico de Chascomús. IIB—INTECH (UNSAM—CONICET). Cam. Circ. Laguna Km. 6, Chascomús, Buenos Aires, CP 7130, Argentina
| | - Timur S. Bulgakov
- Academy of Biology and Biotechnology, Southern Federal University, Rostov-on-Don 344090, Rostov Region, Russia
| | - Rafael F. Castañeda-Ruiz
- Instituto de Investigaciones Fundamentales en Agricultura Tropical “Alejandro de Humboldt” (INIFAT), calle 1, esq. 2, Santiago de Las Vegas, Ciudad de La Habana, C.P. 17200, Cuba
| | - Manoj E. Hembrom
- Central National Herbarium, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand
- Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China
| | | | - Andrea Michlig
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Jorinde Nuytinck
- Naturalis Biodiversity Center, P.O. Box 9517, 2300RA Leiden, The Netherlands
| | - Arvind Parihar
- Cryptogamic Unit, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Orlando Fabián Popoff
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Natalia Andrea Ramirez
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Meiriele Da Silva
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil
| | - Rajnish K. Verma
- Department of Botany, Mycology and Plant Pathology Laboratory, Panjab University Chandigarh, 160014, India
| | - Valérie Hofstetter
- Department of Plant Protection, Agroscope Changins-Wädenswil Research Station ACW, Rte De Duiller, CH-1260 Nyon 1, Switzerland
| |
Collapse
|
8
|
Buyck B, Henkel TW, Dentinger BTM, Séné O, Hofstetter V. Multigene Sequencing Provides a Suitable Epitype, Barcode Sequences and a Precise Systematic Position for the Enigmatic, AfricanCantharellus miniatescens. CRYPTOGAMIE MYCOL 2016. [DOI: 10.7872/crym/v37.iss3.2016.269] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
|
9
|
|
10
|
Buyck B, Moreau PA, Courtecuisse R, Kong A, Roy M, Hofstetter V. Cantharellus coccolobaesp. nov. andCantharellus garnieri, Two Tropical Members ofCantharellussubg.Cinnabarinus. CRYPTOGAMIE MYCOL 2016. [DOI: 10.7872/crym/v37.iss3.2016.391] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
|
11
|
Buyck B, Randrianjohany E, Hofstetter V. Almost One Century Later…Cantharellus avellaneusFinally Rediscovered! CRYPTOGAMIE MYCOL 2016. [DOI: 10.7872/crym/v37.iss3.2016.259] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
|