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Reactive molecular dynamics simulations of lithium-ion battery electrolyte degradation. Sci Rep 2024; 14:10281. [PMID: 38704444 DOI: 10.1038/s41598-024-60063-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Accepted: 04/18/2024] [Indexed: 05/06/2024] Open
Abstract
The development of reliable computational methods for novel battery materials has become essential due to the recently intensified research efforts on more sustainable energy storage materials. Here, we use a recently developed framework allowing to consistently incorporate quantum-mechanical activation barriers to classical molecular dynamics simulations to study the reductive solvent decomposition and formation of the solid electrolyte interphase for a graphite/carbonate electrolyte interface. We focus on deriving condensed-phase effective rates based on the elementary gas-phase reduction and decomposition energy barriers. After a short initial transient limited by the elementary barriers, we observe that the effective rate shows a transition to a kinetically slow regime influenced by the changing coordination environment and the ionic fluxes between the bulk electrolyte and the interface. We also discuss the impact of the decomposition on the ionic mobility. Thus, our work shows how elementary first-principles properties can be mechanistically leveraged to provide fundamental insights into electrochemical stability of battery electrolytes.
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On the Creation and Optical Microstructure Characterisation of Additively Manufactured Foam Structures (AMF). Polymers (Basel) 2023; 15:3544. [PMID: 37688170 PMCID: PMC10490211 DOI: 10.3390/polym15173544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Revised: 08/09/2023] [Accepted: 08/22/2023] [Indexed: 09/10/2023] Open
Abstract
Plastic-based additive manufacturing processes are becoming increasingly popular in the production of structural parts. Based on the idea of lightweight design and the aim of extending the functionality of additive structures, the production of additively manufactured foam structures has emerged as a new field of application. The optical characterisation of these structures is of particular importance for process adjustments and the identification of (unwanted) changes in the foam structure. The degree of foaming and the fineness of a foam structure are of interest at this point. In this context, only the part of a structure dominated by foam pores is considered a foam structure. So far, there are no sophisticated methods for such an optical characterisation. Therefore, in this work, microscope images of manufactured as well as artificially created additively manufactured foam structures were evaluated. On these images, the features porosity, pore size, pore amount and a measure for the textural change were determined in order to obtain information about changes within an additively manufactured foam structure. It is shown that additive structures show changing pore shapes depending on the orientation of the cutting plane, although there are no changes in the foaming behaviour. Therefore, caution is required when identifying changes within the foam structure. It was also found that, owing to the additive process, the total porosity is already set in the slicing process and remains constant even if the degree of foaming of individual tracks is changed. Therefore, the degree of foaming cannot be determined on the basis of the total porosity, but it can be assessed on the basis of the formation of large networks of process-related pores.
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Can Different Parameter Sets Lead to Equivalent Optima between Geometric Accuracy and Mechanical Properties in Arburg Plastic Freeforming? Polymers (Basel) 2023; 15:polym15061516. [PMID: 36987296 PMCID: PMC10054619 DOI: 10.3390/polym15061516] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Revised: 03/08/2023] [Accepted: 03/13/2023] [Indexed: 03/30/2023] Open
Abstract
Technological advances have led to the increased use of plastic-based additive manufacturing processes for the production of consumer goods and spare parts. For this reason, the need for the best possible mechanical properties while maintaining geometric accuracy is becoming increasingly important. One of these additive manufacturing processes is the Arburg Plastic Freeforming process, which differs from the widely used Fused Filament Fabrication process in the way that droplets are discharged along a track instead of continuous extruded tracks. As with all other plastic-based additive manufacturing processes, due to the round shape of the tracks, voids occur between the individual tracks during manufacturing, which effects mechanical properties. In contrast to previous work, which mainly focused on how the mechanical properties change with a change in a single printing parameter, this work focused more closely on the interaction of three relevant printing parameters considered as a parameter set. Their influence on the mechanical properties was investigated by tensile tests, the influence on the residual porosity by density measurements and the influence on the geometric accuracy by surface roughness measurements. It was shown that by considering the parameters as a parameter set, states of high density and therefore high mechanical properties while reaching minimal surface roughness can be achieved for significantly more combinations than previously assumed. However, for these states the residual porosity was slightly different. This difference was explained by a parameter-dependent deformation factor of the droplets, which influences the maximal possible degree of filling during manufacturing. For the optimization of arbitrary parameter sets, an analytical model was derived.
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Characterisation of functional deficits induced by AAV overexpression of alpha-synuclein in rats. CURRENT RESEARCH IN NEUROBIOLOGY 2022; 4:100065. [PMID: 36632447 PMCID: PMC9827042 DOI: 10.1016/j.crneur.2022.100065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2022] [Revised: 11/22/2022] [Accepted: 12/01/2022] [Indexed: 12/23/2022] Open
Abstract
Background In the last decades different preclinical animal models of Parkinson's disease (PD) have been generated, aiming to mimic the progressive neuronal loss of midbrain dopaminergic (DA) cells as well as motor and non-motor impairment. Among all the available models, AAV-based models of human alpha-synuclein (h-aSYN) overexpression are promising tools for investigation of disease progression and therapeutic interventions. Objectives The goal with this work was to characterise the impairment in motor and non-motor domains following nigrostriatal overexpression of h-aSYN and correlate the behavioural deficits with histological assessment of associated pathology. Methods Intranigral injection of an AAV9 expressing h-aSYN was compared with untreated animals, 6-OHDA and AAV9 expressing either no transgene or GFP. The animals were assessed on a series of simple and complex behavioural tasks probing motor and non-motor domains. Post-mortem neuropathology was analysed using immunohistochemical methods. Results Overexpression of h-aSYN led to progressive degeneration of DA neurons of the SN and axonal terminals in the striatum (STR). We observed extensive nigral and striatal pathology, resembling that of human PD brain, as well as the development of stable progressive deficit in simple motor tasks and in non-motor domains such as deficits in motivation and lateralised neglect. Conclusions In the present work we characterized a rat model of PD that closely resembles human PD pathology at the histological and behavioural level. The correlation of cell loss with behavioural performance enables the selection of rats which can be used in neuroprotective or neurorestorative therapies.
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Neutrophil Extracellular Traps (NETs) im Gefäßsystem. GEFÄSSCHIRURGIE 2022; 27:444-448. [PMID: 36118259 PMCID: PMC9466318 DOI: 10.1007/s00772-022-00934-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Accepted: 09/01/2022] [Indexed: 12/01/2022]
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Computational study of the structure of ternary ionic liquid/salt/polymer electrolytes based on protic ionic liquids. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2021.115883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Planctopirus ephydatiae, a novel Planctomycete isolated from a freshwater sponge. Syst Appl Microbiol 2019; 43:126022. [PMID: 31785948 DOI: 10.1016/j.syapm.2019.126022] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2019] [Revised: 09/30/2019] [Accepted: 10/02/2019] [Indexed: 01/28/2023]
Abstract
The microbiome of freshwater sponges is rarely studied, and not a single novel bacterial species has been isolated and subsequently characterized from a freshwater sponge to date. A previous study showed that 14.4% of the microbiome from Ephydatia fluviatilis belong to the phylum Planctomycetes. Therefore, we sampled an Ephydatia sponge from a freshwater lake and employed enrichment techniques targeting bacteria from the phylum Planctomycetes. The obtained strain spb1T was subject to genomic and phenomic characterization and found to represent a novel planctomycetal species proposed as Planctopirus ephydatiae sp. nov. (DSM 106606 = CECT 9866). In the process of differentiating spb1T from its next relative Planctopirus limnophila DSM 3776T, we identified and characterized the first phage - Planctopirus phage vB_PlimS_J1 - infecting planctomycetes that was only mentioned anecdotally before. Interestingly, classical chemotaxonomic methods would have failed to distinguish Planctopirus ephydatiae strain spb1T from Planctopirus limnophila DSM 3776T. Our findings demonstrate and underpin the need for whole genome-based taxonomy to detect and differentiate planctomycetal species.
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Understanding transport mechanisms in ionic liquid/carbonate solvent electrolyte blends. Phys Chem Chem Phys 2018; 20:16579-16591. [PMID: 29873343 DOI: 10.1039/c8cp01485j] [Citation(s) in RCA: 44] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
To unravel mechanistic details of the ion transport in liquid electrolytes, blends of the ionic liquid (IL) 1-butyl-1-methylpyrrolidinium bis(trifluoromethylsulfonyl)imide (Pyr14TFSI), ethylene carbonate (EC) and dimethyl carbonate (DMC) with the conducting salts lithium hexafluorophosphate (LiPF6) and lithium bis(trifluoromethylsulfonyl)imide (LiTFSI) were investigated as a function of the IL concentration. Electrochemical impedance, Pulsed Field Gradient Nuclear Magnetic Resonance (PFG NMR) and Raman spectroscopy supported by Molecular Dynamics (MD) simulations allowed the structural and dynamic correlations of the ion motions to be probed. Remarkably, we identified that though the individual correlations among different ion types exhibit a clear concentration dependence, their net effect is nearly constant throughout the entire concentration range, resulting in approximately equal transport and transference numbers, despite a monitored cross-over from carbonate-based lithium coordination to a TFSI-based ion coordination. In addition, though dynamical ion correlation could be found, the absolute values of the ionic conductivity are essentially determined by the overall viscosity of the electrolyte. The IL/carbonate blends with a Pyr14TFSI fraction of ∼10 wt% are found to be promising electrolyte solvents, with ionic conductivities and lithium ion transference numbers comparable to those of standard carbonate-based electrolytes while the thermal and electrochemical stabilities are considerably improved. In contrast, the choice of the conducting salt only marginally affects the transport properties.
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Virtual inter-professional education, can it work? Physiotherapy 2015. [DOI: 10.1016/j.physio.2015.03.3441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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10
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Induced coherence, vacuum fields, and complementarity in biphoton generation. PHYSICAL REVIEW LETTERS 2015; 114:053601. [PMID: 25699438 DOI: 10.1103/physrevlett.114.053601] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2014] [Indexed: 06/04/2023]
Abstract
It is well established that spontaneous parametric down-conversion with induced coherence across two coupled interferometers results in high-visibility single-photon interference. We describe experiments in which additional photon channels are introduced such that "which-path" information is made possible and the fringe visibility in single-photon interference is reduced in accordance with basic notions of complementarity. However, these additional pathways result in nearly perfect visibility when photons are counted in coincidence. A simplified theoretical model accounts for these observations and attributes them directly to the vacuum fields at the different crystals.
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Nonlinear response and crowding effects in microrheology. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 87:012302. [PMID: 23410326 DOI: 10.1103/physreve.87.012302] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2012] [Revised: 10/31/2012] [Indexed: 06/01/2023]
Abstract
The mobility of tagged particles in a microrheological setup has been investigated via molecular dynamics simulations of a three-dimensional Lennard-Jones binary mixture. After coupling a small number of particles to a constant external driving force, the drift velocity and other observables of the dragged probe particles are reported in the linear and nonlinear response regime. In the nonlinear regime significant crowding effects are observed, thereby creating stringlike structures. Formation of the strings further enhances the nonlinear effects. A systematic study of these effects' dependence on temperature and total number of driven probe atoms is presented.
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Increased efficacy of the 6-hydroxydopamine lesion of the median forebrain bundle in small rats, by modification of the stereotaxic coordinates. J Neurosci Methods 2011; 200:29-35. [PMID: 21723319 DOI: 10.1016/j.jneumeth.2011.06.012] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2010] [Revised: 06/09/2011] [Accepted: 06/14/2011] [Indexed: 01/20/2023]
Abstract
The 6-hydroxydopamine (6-OHDA) lesion is the most widely used rat model of Parkinson's disease. A single unilateral injection of 6-OHDA into the median forebrain bundle (MFB) selectively destroys dopamine neurons in the ipsilateral substantia nigra pars compacta (SNc) and ventral tegmental area (VTA), removing more than 95% of the dopamine innervation from target areas. The stereotaxic coordinates used to deliver 6-OHDA to the MFB have been used in our laboratory successfully for more than 25 years. However, in recent years we have observed a decline in the success rate of this lesion. Previously regular success rates of >80% of rats lesioned, have become progressively more variable, with rates as low as 20% recorded in some experiments. Having excluded variability of the neurotoxin and operator errors, we hypothesized that the change seen might be due to the use of smaller rats at the time of first surgery. An attempt to proportionally adjust the lesion coordinates base on head size did not increase lesion efficacy. However, in support of the small rat hypothesis it was observed that, using the standard coordinates, rat's heads had a "nose-up" position in the stereotaxic fame. Adjustment of the nose bar to obtain a flat head position during surgery improved lesion success, and subsequent adjustments of the lesion coordinates to account for smaller head size led to a greatly increased lesion efficacy (>90%) as assessed by amphetamine induced rotation.
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Entropy of the hard-core model. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2010; 82:021502. [PMID: 20866813 DOI: 10.1103/physreve.82.021502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2010] [Indexed: 05/29/2023]
Abstract
The entropy of the hard-core model is analyzed subject to dimension, system size and particle density. Inspired by the exactly solvable one-dimensional case and the results from a virial expansion, we suggest a scaling relation for the two-dimensional and three-dimensional case. These relations are compared with numerical results, obtained by a modified Widom's particle insertion method. The notion of finite size effects, relevant for atomic glass-forming systems, is discussed in the context of the present results.
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Patterned nucleation control in vacuum deposition of organic molecules. PHYSICAL REVIEW LETTERS 2007; 98:225504. [PMID: 17677858 DOI: 10.1103/physrevlett.98.225504] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2007] [Indexed: 05/16/2023]
Abstract
We report a generally applicable method to pattern organic molecules on mesoscopic scales. In our method, organic molecular beam deposition was conducted on substrate surfaces prepatterned with materials to which the organic molecules have larger binding energies in comparison to the substrate. Fully uniform nucleation control at these predefined locations can be achieved by an appropriate selection of the growth parameters including temperature and deposition rate. The physical mechanisms involved are studied by Monte Carlo simulations and stand in good agreement with the experimental findings.
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Cation transport in polymer electrolytes: a microscopic approach. PHYSICAL REVIEW LETTERS 2007; 98:227802. [PMID: 17677880 DOI: 10.1103/physrevlett.98.227802] [Citation(s) in RCA: 76] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2007] [Indexed: 05/16/2023]
Abstract
A microscopic theory for cation diffusion in polymer electrolytes is presented. Based on a thorough analysis of molecular dynamics simulations on poly(ethylene) oxide with LiBF4, the mechanisms of cation dynamics are characterized. Cation jumps between polymer chains can be identified as renewal processes. This allows us to obtain an explicit expression for the lithium ion diffusion constant DLi by invoking polymer-specific properties such as the Rouse dynamics. This extends previous phenomenological and numerical approaches. In particular, the chain length dependence of DLi can be predicted and compared with experimental data. This dependence can be fully understood without referring to entanglement effects.
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Origin of the decoupling of oxygen and silicon dynamics in liquid silica as expressed by its potential energy landscape. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2006; 74:051502. [PMID: 17279912 DOI: 10.1103/physreve.74.051502] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2006] [Indexed: 05/13/2023]
Abstract
The oxygen and silicon dynamics in silica are compared via computer simulations. In agreement with experimental data and previous simulations a decoupling of oxygen and silicon dynamics is observed upon cooling. The origin of this decoupling is studied in the framework of the potential energy landscape. From analysis of the transition features between neighboring superstructures of minima, denoted metabasins, the differences between the oxygen and silicon dynamics can be quantified. The decoupling can be explicitly related to the presence of generalized rotational processes, giving rise to oxygen but not to silicon displacement. Closer analysis of these processes yields important insight into the nature of the potential energy landscape of silica. The physical picture of relaxation processes in silica, obtained in previous work for oxygen dynamics, is consistent with decoupling effects, elucidated here.
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Microscopic Description of the Low-Temperature Anomalies in Silica and Lithium Silicate via Computer Simulations. J Phys Chem B 2006; 110:19044-52. [PMID: 16986902 DOI: 10.1021/jp061347c] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Information about the nature of the low-temperature anomalies and in particular the properties of the tunneling systems in silica and lithium silica glasses are revealed via computer simulations. The potential energy landscape of these systems is systematically explored for adjacent pairs of local minima which may act as double-well potentials (DWPs) at low temperatures. Three different types of DWPs are distinguished, related to perfectly coordinated silica, intrinsic silica defects, and extrinsic defects. Their properties such as the spatial extension and the dipole moment are characterized in detail. Furthermore, the absolute number of tunneling systems, that is, symmetric DWPs, is estimated. The results are compared with dielectric echo, specific heat, and acoustic experiments on Suprasil I and Suprasil W. A semiquantitative agreement for all relevant features is obtained.
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Dynamics of liquid silica as explained by properties of the potential energy landscape. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2006; 73:061503. [PMID: 16906832 DOI: 10.1103/physreve.73.061503] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2006] [Revised: 04/27/2006] [Indexed: 05/11/2023]
Abstract
The dynamics of silica displays an Arrhenius temperature dependence, classifying silica as a strong glass-former. Using recently developed concepts to analyze the potential energy landscape, one can get a far-reaching understanding of the long-range transport of silica. It can be expressed in terms of properties of the thermodynamics as well as local relaxation processes, thereby extending the phenomenological standard picture of a strong glass-former. The local relaxation processes are characterized by complex correlated sequences of bond breaking and reformation processes.
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What is moving in silica at 1 K? A computer study of the low-temperature anomalies. PHYSICAL REVIEW LETTERS 2005; 95:155502. [PMID: 16241735 DOI: 10.1103/physrevlett.95.155502] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2005] [Indexed: 05/05/2023]
Abstract
Though the existence of two-level systems (TLS) is widely accepted to explain low-temperature anomalies in many physical observables, knowledge about their properties is very rare. For silica, which is one of the prototype glass-forming systems, we elucidate the properties of the TLS via computer simulations by applying a systematic search algorithm. We get specific information in the configuration space, i.e., about relevant energy scales, the absolute number of TLS, and electric dipole moments. Furthermore, important insight about the real-space realization of the TLS can be obtained. Comparison with experimental observations is included.
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Potential-energy landscape of a supercooled liquid and its resemblance to a collection of traps. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2005; 72:021503. [PMID: 16196569 DOI: 10.1103/physreve.72.021503] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2005] [Revised: 06/22/2005] [Indexed: 05/04/2023]
Abstract
It is analyzed whether the potential energy landscape of a glass-forming system can be effectively mapped on a random model which is described in statistical terms. For this purpose we generalize the simple trap model of Monthus and Bouchaud [J. Phys. A 29, 3847 (1996)] by dividing the total system into M weakly interacting identical subsystems, each being described in terms of a trap model. The distribution of traps in this extended trap model (ETM) is fully determined by the thermodynamics of the glass former. The dynamics is described by two adjustable parameters, one characterizing the common energy level of the barriers, the other the strength of the interaction. The comparison is performed for the standard binary mixture Lennard-Jones system with 65 particles. The metabasins, identified in our previous work, are chosen as traps. Comparing molecular dynamics simulations of the Lennard-Jones system with Monte Carlo calculations of the ETM allows one to determine the adjustable parameters. Analysis of the first moment of the waiting distribution yields an optimum agreement when choosing M approximately 3 subsystems. Comparison with the second moment of the waiting time distribution, reflecting dynamic heterogeneities, indicates that the sizes of the subsystems may fluctuate.
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Origin of the fragile-to-strong crossover in liquid silica as expressed by its potential-energy landscape. PHYSICAL REVIEW LETTERS 2004; 93:235701. [PMID: 15601173 DOI: 10.1103/physrevlett.93.235701] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2004] [Indexed: 05/24/2023]
Abstract
The origin of the fragile-to-strong crossover in liquid silica is characterized in terms of properties of the potential-energy landscape (PEL). Using the standard BKS model [B. W. H. van Beest, G. J. Kramer, and R. A. van Santen, Phys. Rev. Lett. 64, 1955 (1990)] of silica we observe a low-energy cutoff of the PEL. It is shown that this feature of the PEL is responsible for the occurrence of the fragile-to-strong crossover and may also explain the avoidance of the Kauzmann paradox. The number of defects, i.e., deviations from the ideal tetrahedral structure, vanishes for configurations with energies close to this cutoff. This suggests a structural reason for this cutoff.
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What does the potential energy landscape tell us about the dynamics of supercooled liquids and glasses? PHYSICAL REVIEW LETTERS 2003; 91:235501. [PMID: 14683192 DOI: 10.1103/physrevlett.91.235501] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2003] [Indexed: 05/24/2023]
Abstract
For a model glass former we demonstrate via computer simulations how macroscopic dynamic quantities can be inferred from a potential energy landscape (PEL) analysis. The essential step is to consider whole superstructures of many PEL minima, called metabasins, rather than single minima. We show that two types of metabasins exist: some allowing for quasifree motion on the PEL (liquidlike), and the others acting as traps (solidlike). The activated, multistep escapes from the latter metabasins are found to dictate the slowing down of dynamics upon cooling over a much broader temperature range than is currently assumed.
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Hopping in a supercooled Lennard-Jones liquid: metabasins, waiting time distribution, and diffusion. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2003; 67:030501. [PMID: 12689046 DOI: 10.1103/physreve.67.030501] [Citation(s) in RCA: 82] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2002] [Indexed: 05/24/2023]
Abstract
We investigate the jump motion among potential energy minima of a Lennard-Jones model glass former by extensive computer simulation. From the time series of minima energies, it becomes clear that the energy landscape is organized in superstructures called metabasins. We show that diffusion can be pictured as a random walk among metabasins, and that the whole temperature dependence resides in the distribution of waiting times. The waiting time distribution exhibits algebraic decays: tau(-1/2) for very short times and tau(-alpha) for longer times, where alpha approximately 2 near T(c). We demonstrate that solely the waiting times in the very stable basins account for the temperature dependence of the diffusion constant.
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Energy barriers and activated dynamics in a supercooled Lennard-Jones liquid. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2003; 67:031506. [PMID: 12689072 DOI: 10.1103/physreve.67.031506] [Citation(s) in RCA: 132] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2002] [Indexed: 05/24/2023]
Abstract
We study the relation of the potential energy landscape (PEL) topography to relaxation dynamics of a small model glass former of Lennard-Jones type. The mechanism under investigation is the hopping between superstructures of PEL minima, called metabasins (MBs). Guided by the idea that the mean durations <tau> of visits to MBs should reflect the local PEL structure, we first derive the effective depths of MBs from dynamics, by the relation E(app)=d ln<tau>/dbeta, where beta=1/k(B)T. Second, we establish a connection of E(app) to the barriers that surround MBs. As the consequence of a rugged PEL, it turns out that escapes from MBs do not happen by single hops between PEL minima, but correspond to complicated multiminima sequences. We introduce the concept of return probabilities to the bottom of the MBs in order to judge when the attraction range of a MB has been left. The energy barriers overcome can then be identified. These turn out to be in good agreement with the effective depths E(app), calculated from dynamics. We are thus able to relate MB lifetimes to their local structure. Moreover, we can trace back the overall diffusive dynamics to the population of MBs and to their local topology, i.e., to purely thermodynamic and structural quantities. Single energy barriers are identified with the help of a new method, which accurately performs a descent along the ridge between two minima. We analyze the population of transition regions between minima, called basin borders. No indication for the mechanism of diffusion to change around the mode-coupling temperature can be found. We discuss the question whether the one-dimensional reaction paths connecting two minima are relevant for the calculation of reaction rates at the temperatures under study.
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Two-dimensional 109Ag NMR and random-walk simulation studies of silver dynamics in glassy silver ion conductors. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2002; 22:344-362. [PMID: 12469819 DOI: 10.1006/snmr.2002.0089] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
By applying one- and two-dimensional 109Ag NMR, we demonstrate that silver diffusion in silver iodide/silver phosphate glasses is governed by a very broad, continuous distribution of correlation times G(lg tau). As a consequence, over a wide temperature range, the 109Ag NMR spectra can be described by a weighted superposition of a Gaussian and a Lorentzian where these line-shape components result from the slow and the fast silver ions in G(lg tau), respectively. For the 109Ag NMR two-time correlation functions F2(t), measured as a stimulated echo, a very stretched decay to F2SS(t(m)) = 0 is observed. When fitting to a Kohlrausch function, exp[-(t/tau)beta], a stretching parameter beta approximately = 0.2 is found. The temperature dependence of the mean correlation time of silver dynamics is described by an Arrhenius law where the activation energy is consistent with the one reported for the dc conductivity sigma(dc). In addition, it is shown that the effect of complex dynamical processes on NMR multi-time correlation functions can easily be calculated when performing random-walk simulations for schematic models such as the random-barrier model and the random-energy model. Based on these models it is possible to simulate various NMR observables and the mean square displacement, thus revealing the information content of multi-dimensional NMR experiments on solid ion conductors.
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27
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Silver dynamics in silver iodide/silver phosphate glasses studied by multi-dimensional 109Ag NMR. Phys Chem Chem Phys 2002. [DOI: 10.1039/b200619g] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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28
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Local Order and Chain Dynamics in Molten Polymer Blocks Revealed by Proton Double-Quantum NMR. Macromolecules 2000. [DOI: 10.1021/ma0013915] [Citation(s) in RCA: 71] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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29
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Cooperativity and spatial correlations near the glass transition: computer simulation results for hard spheres and disks. PHYSICAL REVIEW. E, STATISTICAL PHYSICS, PLASMAS, FLUIDS, AND RELATED INTERDISCIPLINARY TOPICS 2000; 61:6898-908. [PMID: 11088382 DOI: 10.1103/physreve.61.6898] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/1999] [Indexed: 05/11/2023]
Abstract
We examine the dynamics of hard spheres and disks at high packing fractions in two and three dimensions, modeling the simplest systems exhibiting a glass transition. As it is well known, cooperativity and dynamic heterogeneity arise as central features when approaching the glass transition from the liquid phase, so an understanding of their underlying physics is of great interest. Cooperativity implies a reduction of the effective degrees of freedom, and we demonstrate a simple way of quantification in terms of the strength and the length scale of dynamic correlations among different particles. These correlations are obtained for different dynamical quantities X(i)(t) that are constructed from single-particle displacements during some observation time t. Of particular interest is the dependence on t. Interestingly, for appropriately chosen X(i)(t) we obtain finite cooperativity in the limit t-->infinity.
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30
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Metastable states as a key to the dynamics of supercooled liquids. PHYSICAL REVIEW LETTERS 2000; 84:2168-2171. [PMID: 11017235 DOI: 10.1103/physrevlett.84.2168] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/1999] [Indexed: 05/23/2023]
Abstract
Computer simulations of a model glass-forming system are presented, which study the correlation between the dynamics in real space and the topography of the potential energy landscape. This analysis clearly reveals that in the supercooled regime the dynamics is strongly influenced by the presence of deep valleys in the energy landscape, corresponding to long-lived metastable amorphous states. We explicitly relate nonexponential relaxation effects and dynamic heterogeneities to these metastable states and thus to the specific topography of the energy landscape.
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31
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32
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Potential energy landscape of a model glass former: thermodynamics, anharmonicities, and finite size effects. PHYSICAL REVIEW. E, STATISTICAL PHYSICS, PLASMAS, FLUIDS, AND RELATED INTERDISCIPLINARY TOPICS 1999; 60:6507-18. [PMID: 11970568 DOI: 10.1103/physreve.60.6507] [Citation(s) in RCA: 80] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/1999] [Indexed: 04/18/2023]
Abstract
It is possible to formulate the thermodynamics of a glass forming system in terms of the properties of inherent structures, which correspond to the minima of the potential energy and build up the potential energy landscape in the high-dimensional configuration space. In this work we quantitatively apply this general approach to a simulated model glass-forming system. We systematically vary the system size between N=20 and N=160. This analysis enables us to determine for which temperature range the properties of the glass former are governed by the regions of the configuration space, close to the inherent structures. Furthermore, we obtain detailed information about the nature of anharmonic contributions. Moreover, we can explain the presence of finite size effects in terms of specific properties of the energy landscape. Finally, determination of the total number of inherent structures for very small systems enables us to estimate the Kauzmann temperature.
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33
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Combined reduced 4D 13C exchange and 1H spin diffusion experiment for determining the length scale of dynamic heterogeneities. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 1999; 140:460-470. [PMID: 10497051 DOI: 10.1006/jmre.1999.1854] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
A multidimensional static solid-state NMR experiment is described that combines 13C exchange sequences with 1H spin diffusion. It realizes a spatial correlation of different reorientation rates. By means of this experiment the length scale of dynamic heterogeneities can be measured directly. The pulse sequence and phase cycle as well as the experimental setup procedure and data analysis are described in detail. It complements the previous letter on this subject where a brief report of the main results were presented (U. Tracht et al., 1998, Phys. Rev. Lett. 81, 2727). Application of this experiment to an amorphous polymer in the supercooled state yields a length scale of immobile regions of about 3 nm.
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34
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Geometry of reorientational dynamics in supercooled poly(vinyl acetate) studied by 13C two-dimensional nuclear magnetic resonance echo experiments. J Chem Phys 1999. [DOI: 10.1063/1.479652] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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35
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Colloidal Fouling of Ultrafiltration Membranes: Impact of Aggregate Structure and Size. J Colloid Interface Sci 1999; 212:264-274. [PMID: 10092354 DOI: 10.1006/jcis.1998.6040] [Citation(s) in RCA: 121] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A close coupling between the structure and size of hematite flocs formed in suspension and the permeability of the cake that accumulates on ultrafiltration membranes is observed. Specific resistances of cakes formed from flocs generated under diffusion-limited aggregation conditions are at least an order of magnitude lower than those of cakes formed from flocs generated under reaction-limited aggregation conditions. Similar effects are observed whether the aggregation regime is controlled by salt concentration, pH, or added organic anions. This dramatic difference in cake resistance is considered to arise from the size and fractal properties of the hematite assemblages. The ease of fluid flow through these assemblages will be influenced both by the fractal dimension of the aggregates and by their size relative to primary particle size (since, for fractal aggregates, porosity increases as the size of the aggregate increases). The size and strength of aggregates are also important determinants of the relative effects of permeation drag, shear-induced diffusion, and inertial lift and result, in the studies reported here, in relatively similar rates of particle deposition for both rapidly and slowly formed aggregates. The results presented here suggest that control of cake permeability (and mass) via control of aggregate size and structure is an area with scope for further development though the nature and extent of compaction effects in modifying the fractal properties of aggregates generated in suspension requires attention. Copyright 1999 Academic Press.
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36
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Aggregation Behavior of a Symmetric, Fluorinated, Telechelic Polymer System Studied by 19F NMR Relaxation. Macromolecules 1999. [DOI: 10.1021/ma9818735] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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37
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Dynamic heterogeneities of translational and rotational motion of a molecular glass former from computer simulations. J Chem Phys 1999. [DOI: 10.1063/1.478334] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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38
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The influence of nonlinear interaction-terms in the spin-boson Hamiltonian for the superohmic case. ACTA ACUST UNITED AC 1999. [DOI: 10.1088/0305-4470/26/23/052] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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39
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Cooperative mechanisms between leg joints of Carausius morosus II. Motor neuron activity and influence of conditional bursting interneuron. J Neurophysiol 1998; 79:2977-85. [PMID: 9636101 DOI: 10.1152/jn.1998.79.6.2977] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
The activity of the motor neuron pools of the protractor coxae muscle and of the thoracic part of the depressor trochanteris muscle during forward walking in the stick insect was investigated, and a spiking local interneuron, able to produce "endogenous bursting" and innervating both motor neuron pools, was identified. Extracellular recordings of the motor neurons innervating the protractor and the thoracic depressor of front, middle, and rear legs, respectively, were made with oil-hook electrodes from the peripheral nerves nl2c and nl4a while the animals were walking on a styrofoam treadwheel. The corresponding leg movements were registered and phase histograms were created with the software Spike2. Intracellular recordings were made in the neuropile of the metathoracic ganglion with glass electrodes filled with the dye Lucifer yellow. In all three legs measured (front, middle, and rear), both motor neuron pools increased their activity during the swing movement. The increase in the activity of the protractor motor neurons started at the end of the stance approximately 100 ms before reaching the posterior extreme position (PEP), and the activity of the large-sized depressor motor neurons increased as soon as the tarsus was lifted at the PEP. A local spiking interneuron was identified that excited both motor neuron pools. In 4 of 23 recordings the interneuron started to burst in synchrony with protractor and thoracic depressor motor neurons. During bursting a depolarizing stimulus reinforced and a hyperpolarizing stimulus inhibited the activity of both motor neuron pools. Thus we conclude that the thoracic part of the depressor trochanteris muscle might be a component of the neuromuscular system that shapes the swing movement. The two proximal joints, subcoxal and coxa-trochanter, connected mechanically via the thoracic part of the depressor trochanteris muscle, are also connected neurally by segmental and intersegmental spiking interneurons (this paper) and by nonspiking local interneurons (see companion paper).
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40
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Phase-conjugating stimulated Brillouin scattering mirror for low powers and reflectivities above 90% in an internally tapered optical fiber. OPTICS LETTERS 1998; 23:834-836. [PMID: 18087357 DOI: 10.1364/ol.23.000834] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
A novel low-power phase-conjugating mirror based on stimulated Brillouin scattering in a quartz fiber with an internal taper is reported. A peak-power threshold as low as 500 W and a maximum reflectivity of 92% were obtained with 30-ns pulses from a Q -switched Nd:YAG laser. The maximum peak powers of 130 kW demonstrated a dynamic range of 1:260. Reliable operation in both single- and multiple-longitudinal-mode operation was observed with conjugation fidelities larger than 95%.
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41
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Heterogeneous and homogeneous dynamics in a simulated polymer melt: Analysis of multi-time correlation functions. J Chem Phys 1997. [DOI: 10.1063/1.473240] [Citation(s) in RCA: 98] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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42
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Geometry and time scale of the complex rotational dynamics of amorphous polymers at the glass transition by multidimensional nuclear magnetic resonance. J Chem Phys 1996. [DOI: 10.1063/1.472511] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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43
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Geometry of Main Chain Motions in Poly(ethyl methacrylate) Monitored by 3D Difference Correlated NMR. Macromolecules 1996. [DOI: 10.1021/ma960911m] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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44
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45
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Collective dynamics in glasses and its relation to the low-temperature anomalies. PHYSICAL REVIEW. B, CONDENSED MATTER 1996; 53:609-619. [PMID: 9983011 DOI: 10.1103/physrevb.53.609] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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46
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Transition between positive and negative hexagons in optical pattern formation. PHYSICAL REVIEW LETTERS 1995; 75:3450-3453. [PMID: 10059589 DOI: 10.1103/physrevlett.75.3450] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
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47
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Rate memory of structural relaxation in glasses and its detection by multidimensional NMR. PHYSICAL REVIEW LETTERS 1995; 75:2851-2854. [PMID: 10059421 DOI: 10.1103/physrevlett.75.2851] [Citation(s) in RCA: 122] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
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48
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Tunneling in real structural glasses: A universal theory. PHYSICAL REVIEW. B, CONDENSED MATTER 1994; 49:1441-1444. [PMID: 10010458 DOI: 10.1103/physrevb.49.1441] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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49
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Microscopic estimation of the deformation potential in a structural model glass. PHYSICAL REVIEW. B, CONDENSED MATTER 1993; 48:9411-9417. [PMID: 10007180 DOI: 10.1103/physrevb.48.9411] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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50
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Microscopic description of tunneling systems in a structural model glass. PHYSICAL REVIEW LETTERS 1993; 70:3911-3914. [PMID: 10053997 DOI: 10.1103/physrevlett.70.3911] [Citation(s) in RCA: 51] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
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