Climate change in the Central Amazon and its impacts on frog populations

Frog population declines have already been observed in the central Amazon even for common species that are considered not to be in danger of extinction. The Amazon is close to its limit of tolerated deforestation, and parts of the forest have already been modified by climate change, which raises questions about how the fauna in these areas would adapt to climate changes by the middle and the end of this century. In this study we used population density data on seven species of Amazonian frogs and analyzed the relationship between the activity of these species and temperature, precipitation, and relative humidity. We also used the least-squares method with logarithmic models to assess whether climate change projected by the Intergovernmental Panel on Climate Change (IPCC) would be an indicator of the population dynamics of these species. Our results suggest that even common species may be may experience population declines and extinction in the next decades due to climate changes.

The Program for Biodiversity Research in Brazil: The role of regional networks for biodiversity knowledge, dissemination, and conservation

The Program for Biodiversity Research (PPBio) is an innovative program designed to integrate all biodiversity research stakeholders. Operating since 2004, it has installed long-term ecological research sites throughout Brazil and its logic has been applied in some other southern-hemisphere countries. The program supports all aspects of research necessary to understand biodiversity and the processes that affect it. There are presently 161 sampling sites (see some of them at Supplementary Appendix), most of which use a standardized methodology that allows comparisons across biomes and through time. To date, there are about 1200 publications associated with PPBio that cover topics ranging from natural history to genetics and species distributions. Most of the field data and metadata are available through PPBio web sites or DataONE. Metadata is available for researchers that intend to explore the different faces of Brazilian biodiversity spatio-temporal variation, as well as for managers intending to improve conservation strategies. The Program also fostered, directly and indirectly, local technical capacity building, and supported the training of hundreds of undergraduate and graduate students. The main challenge is maintaining the long-term funding necessary to understand biodiversity patterns and processes under pressure from global environmental changes.

Phylogenetic relationships of the poorly known treefrog Boana hobbsi (Cochran amp; Goin, 1970) (Anura: Hylidae), systematic implications and remarks on morphological variations and geographic distribution

Boana hobbsi is a poorly known hylid frog currently placed within the Boana punctata group. Yet, morphological, ecological and bioacoustic traits do not support this placement, with no molecular data being available to date to test this hypothesis. Based on newly collected mitochondrial DNA sequences, morphological data review and field observations, we provide new insight into the phylogenetic relationships, morphological variations and geographic distribution of B. hobbsi. Our findings reveal that B. hobbsi is nested (with strong support) within the Boana benitezi group, recovering once more a polyphyletic Boana punctata group. Supported by this new genetic, morphological and ecological evidence, we propose a new taxonomic arrangement which includes B. hobbsi as a member of the Boana benitezi group. Furthermore, we emphasize the importance of conducting biological inventories in remote Amazonian areas, where many taxonomic and geographic knowledge gaps persist with regards to Amphibian diversity.

Species diversity and biogeography of an ancient frog clade from the Guiana Shield (Anura: Microhylidae: Adelastes, Otophryne, Synapturanus) exhibiting spectacular phenotypic diversification

The outstanding biodiversity of the Guiana Shield has raised many questions about its origins and evolution. Frogs of the genera Adelastes, Otophryne and Synapturanus form an ancient lineage distributed mostly across this region. These genera display strikingly disparate morphologies and life-history traits. Notably, Synapturanus is conspicuously adapted to fossoriality and is the only genus within this group to have dispersed further into Amazonia. Moreover, morphological differences among Synapturanus species suggest different degrees of fossoriality that might be linked to their biogeographical history. Through integrative analysis of genetic, morphometric and acoustic data, we delimited 25 species in this clade, representing a fourfold increase. We found that the entire clade started to diversify ~55 Mya and Synapturanus ~30 Mya. Members of this genus probably dispersed three times out of the Guiana Shield both before and after the Pebas system, a wetland ecosystem occupying most of Western Amazonia during the Miocene. Using a three-dimensional osteological dataset, we characterized a high morphological disparity across the three genera. Within Synapturanus, we further characterized distinct phenotypes that emerged concomitantly with dispersals during the Miocene and possibly represent adaptations to different habitats, such as soils with different physical properties.

Occurrence of gastrointestinal parasitic diseases of swine in different production phases in commercial pig farms from the State of Santa Catarina, southern Brazil

ABSTRACT Gastrointestinal parasites are important, since they can cause a decrese in the performance of swine. The occurrence of parasites in pig farms can create economic losses such as reduction in the value of carcasses and increasing expenses with medicines and veterinary assistance. This study aimed at investigating the occurrence of intestinal parasites in different phases of production reared pigs in intensive prodution systems in the western region of the State of Santa Catarina. A total of 403 fecal samples were analyzed, of which 51.86% were positive for one or more parasites in different phases of production. Finishing pigs had the highest prevalence of parasites (60.19%) followed by nursery pigs (55.44%), pigs in breading sows (50.49%), and suckling piglets (40.81%). Strongylida parasites had higher occurrence (28.78%), and were also the most frequent in the finishing, breading sows, and nursery phases. Coccidia were more occurrent in suckling piglets. This study highlights the need of implementing suitable antiparasitic control measures in all phases of swine production associated with a surveillance system for the diagnosis of endoparasite infection in pigs. Our results demonstrate that endoparasites are highly occurring in pigs, even in intensive system animals on technified farms.

The tadpole of Amazophrynella teko (Anura: Bufonidae) from the eastern Amazon, Brazil

The genus Amazophrynella Fouquet, Recoder, Teixeira, Cassimiro, Amaro, Camacho, Damasceno, Carnaval, Moritz, and Rodrigues, is represented by 12 nominal species and distributed in the Amazon region of Brazil, Bolivia, Colombia, Ecuador, Guyana, French Guiana, Peru, and Venezuela (Frost 2020). In the last eight years, ten species from this genus have been described. However, despite the wide distribution and diversity of these species, only the tadpole of Amazophrynella manaos Rojas, Carvalho, Ávila, Farias, and Hrbek from the Brazilian Amazon (Menin et al. 2014) and A. siona Rojas, Fouquet, Ron, Hernández-Ruz, Melo-Sampaio, Chaparro, Vogt, Carvalho, Pinheiro, Ávila, Farias, Gordo, and Hrbek from Ecuador have been formally described (Duellman Lynch 1969; Rojas et al. 2018). Literature about tadpole morphology, reproduction, and bioacoustics of Amazophrynella is scarce and necessary to a comprehensive taxonomic classification (Kaefer et al. 2019). Herein, we describe the tadpole of the recently described species Amazophrynella teko Rojas, Fouquet, Ron, Hernández-Ruz, Melo-Sampaio, Chaparro, Vogt, Carvalho, Pinheiro, Ávila, Farias, Gordo, and Hrbek, found in the northeastern Amazon, in the State of Amapá, Brazil, and in French Guiana.

Description of the tadpole of Dendropsophus haraldschultzi (Bokermann, 1962) (Anura: Hylidae), with comments on reproductive biology

The genus Dendropsophus Fitzinger contains 108 recognized species (Frost 2020) distributed in nine species groups according to Faivovich et al. (2005). However, recent phylogenetic analysis recognized the presence of nonmonophyletic groups (e.g., Wiens et al. 2010; Fouquet et al. 2011; Motta et al. 2012; Jansen et al. 2019) suggesting that the relationships among species of Dendropsophus require careful revision. Species of this genus are distributed in the tropical and subtropical South America, including Trinidad, southward to northern Argentina and Uruguay and northward to Central America and tropical southern Mexico (Duellman et al. 2016; Frost 2020). Dendropsophus haraldschultzi (Bokermann) was described in the area of Santa Rita do Weill, municipality of São Paulo de Olivença, Amazonas State, Brazil. Adult individuals of D. haraldschultzi are small sized frogs (males 18-22 mm and females 22-25 mm; Rodríguez Duellman 1994) with tuberculate skin on dorsal surfaces, denser on the head. They are found near open ponds and permanent large streams or in floating meadows along the Amazon river (Bokermann 1962; Rodríguez Duellman 1994; Böning et al. 2017) and have been also found along the Amazon River Valley in the Brazilian states of Pará and Amapá (Missassi et al. 2017), and in Peru and Colombia. Bokermann (1962) and later authors (e.g., Lutz 1973) considered this species without evident taxonomic affinities. Currently, D. haraldschulzi is not assigned to any species group within the genus (Faivovich et al. 2005).

Species richness and composition of snake assemblages in poorly accessible areas in the Brazilian Amazonia

Abstract: Snakes are a diverse group of terrestrial vertebrates of the order Squamata. Despite that, in the Amazonian biome, information about distribution and identification of snakes is limited when compared to other groups. Additionally, in Amazonia there is a sampling bias towards areas geographically close to urban centers and more densely populated areas. This in turn leads to false distribution gaps in poorly accessible areas of Amazonia. In this article we report the composition of snake assemblages in six areas of the Brazilian Amazonia, based on field sampling conducted over four years using standardized methods. We sampled 70 species from eight families: Typhlopidae (n=1), Leptotyphlopidae (n=1), Anillidae (n=1), Boidae (n=5), Colubridae (n=15), Dipsadidae (n=35), Elapidae (n=7), and Viperidae (n=5). The largest number of species was recorded in the Trombetas River area and the lowest in the Jatapu River area. The total beta diversity was 0.40 and the snake assemblages were structured mainly by replacement (72.5%). The time-limited search was the method that recorded the greatest number of individuals in the studied areas (44.1%) and also the greatest number of species (n=40). However, some species were recorded only by other methods such as interception by pitfall traps with directional fences. Despite the large number of species sampled in the study, no particular area comprised more than 40% of species registered in all the areas, indicating that snakes are poorly detected even with large sampling effort across multiple areas of a species distribution.

Intraspecific and interspecific trait variability in tadpole meta-communities from the Brazilian Atlantic rainforest

A better understanding of species coexistence and community dynamics may benefit from more insights on trait variability at the individual and species levels.Tadpole assemblages offer an excellent system to understand the relative influence of intraspecific and interspecific variability on community assembly, due to their high phenotypic plasticity, and the strong influence that environmental variables have on their spatial distribution and individual performance.Here, we quantified the intraspecific and interspecific components of tadpoles' trait variability in order to investigate their relative role in shaping tadpole communities.We selected eight functional traits related to microhabitat use, foraging strategies, and swimming ability. We measured these traits on 678 individuals from 22 species captured in 43 ponds in the Atlantic Forest. We used single- and multitrait analyses to decompose trait variability. To explore the action of external and internal filtering on community assembly, we used a variance decomposition approach that compares phenotypic variability at the individual, population, community and regional levels.On average, 33% of trait variability was due to within-species variation. This decomposition varied widely among traits. We found only a reduced effect of external filtering (low variation in the height of the ventral fin within ponds in comparison to the total variation), whereas the internal filtering was stronger than expected. Traits related to the use of different microhabitats through the water column were generally less variable than traits related to swimming ability to escape of predators, with tail traits being highly variable within species.Our study highlights the importance of incorporating both intraspecific and interspecific, trait differences and of focusing on a diversity of traits related to both stabilizing niche and fitness differences in order to better understand how trait variation relates to species coexistence.

Sole coloration as an unusual aposematic signal in a Neotropical toad

Many animals have evolved remarkable strategies to avoid predation. In diurnal, toxic harlequin toads (Atelopus) from the Amazon basin, we find a unique colour signal. Some Atelopus populations have striking red soles of the hands and feet, visible only when walking. When stationary, the toads are hard to detect despite their yellow-black dorsal coloration. Consequently, they switch between high and low conspicuousness. Interestingly, some populations lack the extra colour display of the soles. We found comprehensive support that the red coloration can act as an aposematic signal directed towards potential predators: red soles are significantly more conspicuous than soles lacking red coloration to avian predators and the presence of the red signal significantly increases detection. Further, toads with red soles show bolder behaviour by using higher sites in the vegetation than those lacking this signal. Field experiments hint at a lower attack risk for clay models with red soles than for those lacking the signal, in a population where the red soles naturally occur. We suggest that the absence of the signal may be explained by a higher overall attack risk or potential differences of predator community structure between populations.

When the unknown lives next door: a study of central Amazonian anurofauna

The number of species of anurans in the Amazon is highly underestimated with new studies reporting the discovery of a large number of species every year. This advance in the discovery of biodiversity is due to the use of molecular tools, especially 16S rRNA gene barcoding, which is used to identify species and discover cryptic lineages. Few anurans of the central Amazon have molecular sequence data available in public databases, which contrasts with the considerable species richness of this biome. The aim of the present study was to test for the presence of cryptic species using the mPTP delimitation algorism. We morphologically identified 26 species, of which 23 were confirmed molecularly with the remaining three species identified as other congeneric species, since sequences with the same epithet do not exist in GenBank. Of these 23 species, nine contained one lineage restricted to central Amazon. This represents an underestimate of 39% in the taxonomic diversity in our sample. This is particularly surprising given that our sampling sites are among the best-studied regions of the central Amazon.

The tadpole of Amazophrynella manaos Rojas, Carvalho, Gordo, Ávila, Farias and Hrbek, 2014 (Anura, Bufonidae) from the type locality and adjacent regions at Central Amazonia, Brazil

The genus Amazophrynella, as currently recognized (Fouquet et al. 2012a, b), is represented by four nominal species (Frost 2014; Rojas et al. 2014) but the tadpoles of only one species, Amazophrynella minuta (Melin) from Ecuador, have been described (Duellman & Lynch 1969; Duellman 1978). Amazophrynella manaos Rojas, Carvalho, Gordo, Ávila, Farias and Hrbek, 2014 occurs in the leaf litter of terra firme forest in the southwestern part of the Brazilian Guiana region (Rojas et al. 2014). The tadpole of this species was briefly described in diagrammatic drawings by Hero (1990) as Dendrophryniscus minutus. Herein, we provide a detailed description of this tadpole based on individuals at 12 stages of development collected in five different sites, including the type locality, at Central Amazonia, Brazil.

Diversidade de anfíbios e répteis Squamata na região do baixo rio Purus, Amazônia Central, Brasil

A região do baixo rio Purus na Amazônia Central - Brasil representa uma área de relevante interesse para conservação de anfíbios e répteis. No entanto, há pouca informação disponível sobre estes grupos taxonômicos para áreas de florestas de terra firme e florestas de várzea, principais paisagens nesta região. Nesse estudo, realizamos uma amostragem ampla em esforço e área, em dois períodos: 2004-2005 e 2009-2010. Utilizamos técnicas complementares eficientes na amostragem da herpetofauna em florestas tropicais: procura ativa limitada por tempo (PLT), armadilhas de interceptação e queda (AIQ) e armadilhas de interceptação com funis duplos (AIF). Foram registradas 160 espécies, sendo 75 de anfíbios (73 anuros e dois gimnofionos) e 85 de répteis (34 lagartos e 51 serpentes). O registro do anuro Dendropsophus allenorum foi o primeiro para o Brasil. Comparando a eficiência dos métodos de coleta, a busca ativa por coletores capacitados (PLT) foi o método mais eficaz na amostragem da herpetofauna; seguido das AIQ, eficientes na captação de anuros terrícolas e lagartos de serrapilheira nas florestas de terra firme. Não utilizamos AIQ nas áreas de várzea por estas terem solos hidricamente saturados. As AIF, apesar de menos eficientes na amostragem de anuros e lagartos, foram eficazes na captura serpentes e facilmente adaptáveis aos solos hidromórficos das várzeas. Uma maior riqueza de espécies e famílias foi encontrada nas florestas de terra firme. As florestas de várzea tiveram uma marcante ausência de famílias fossoriais e de serrapilheira. No entanto, nas florestas de várzea encontramos um maior número de espécies de anuros arborícolas (Hylidae) e de lagartos heliotérmicos maiores (Teiidae). Entretanto, avaliando separadamente cada período de amostragem, a riqueza de espécies da herpetofauna torna-se similar entre os diferentes tipos de paisagens florestais, tendendo ser maior nas florestas de terra firme. Apesar de similares em número espécies, as florestas de terra firme e de várzea foram diferentes quanto ao conjunto das espécies. A diversidade complementar de anfíbios e répteis Squamata entre florestas de terra firme e de várzea (diversidade beta-β), paisagens de maior abrangência local, possivelmente representa a maior contribuição para a diversidade regional da herpetofauna no baixo rio Purus (diversidade Gama-γ).

Distribution of frogs in riparian areas of an urban forest fragment in Central Amazonia

This study aimed to evaluate how environmental variables (width of valley, stream size, forest edge distance, and leaf-litter depth) affect the abundance and richness of species of frog species in riparian areas of an urban forest fragment in Central Amazonia. The study was conducted at the campus of the Universidade Federal do Amazonas, Manaus, Brazil, between May 2008 and April 2009, when three nocturnal and diurnal samples were taken from ten plots. A total of 17 species belonging to seven families were registered. The number of species recorded per plot varied from seven to 14. We detected a relationship between the edge distance and richness: the plots with lower richness were located near the fragment border. The variables had no significant effect on abundance of each species.

Species richness, relative abundance, and habitat of reproduction of terrestrial frogs in the Triângulo Mineiro region, Cerrado biome, southeastern Brazil

Based on field observations and pitfall sampling, we determined the species richness, relative abundance, and reproductive habitat of terrestrial frogs in three municipalities in the Triângulo Mineiro region, south Cerrado biome, in southeastern Brazil. We found thirty-two species of terrestrial frogs, belonging to the families Brachycephalidae, Bufonidae, Cycloramphidae, Dendrobatidae, Leiuperidae, Leptodactylidae and Microhylidae. Most of the species were found in open areas and reproduced in human-generated environments, such as artificial lakes (10 species) and ponds (14 species). Dominance was high, with Physalaemus cuvieri Fitzinger, 1826 (Leiuperidae) representing 48% of sampled frogs. A larger number of individuals was captured in the wet season, when most of the species were reproducing. Compared to other areas of Cerrado biome, the Triângulo Mineiro sites presented a larger number of species, which may be attributed to the larger sampled area and greater sampling effort, lower altitude and presence of human generated habitats. The richness of terrestrial frogs was also larger than that in some forested localities in southeastern Brazil, indicating that the number of species cannot be explained only by precipitation and type of vegetation cover. The greater abundance of individuals during the wet season may be related to a greater movement of adults to breeding sites and to juvenile recruitment/dispersion. The heterogeneity of environments in the Cerrado biome, including its several isolated highlands, contributes to its high (local and regional) diversity of frogs.

Resource use and coexistence of two syntopic hylid frogs (Anura, Hylidae)

The objectives of this study were to measure and compare niche breadth and overlap of males of Hyla nana Boulenger, 1889 and Hyla sanborni Schmidt, 1944 in three neighboring ponds. The measured niche dimensions were seasonal occurrence, call site, and diet. The reproductive season of H. sanborni was longer in permanent ponds, whereas H. nana had a longer reproductive season in the temporary pond. Call site characteristics were similar for both species, however H. sanborni called from higher perches than H. nana. Diptera (Nematocera) were the most consumed item by both species in the three ponds but, in general, H. nana ingested larger prey than H. sanborni. For both species, the consumption of prey types was correlated with the availability in the environment. The multidimensional overlap between H. nana and H. sanborni was higher in the permanent ponds than the temporary pond, in which H. sanborni was rare. These species differed in abundance among ponds, consumed prey of different sizes, and probably fed in different time periods. Moreover, the data obtained suggest that structural differences in the ponds may modify the dynamics of resource partitioning between the two species. Beside the great overlap found in the major niche dimensions analyzed the detected differences may be great enough to allow their coexistence.

[Growth in diabetic children as measured by height and weight (author's transl)]

Height and weight of 745 children (358 females and 387 males) under 18 years of age, presenting with insulin-dependent diabetes were compared with those of a French reference population. A similar comparison was done with a sample of 329 adults (155 females and 174 males) whose insulin-dependent diabetes had occurred before the age of 15. Results indicate that these children generally have a normal growth and reach a mean height (females : 158 cm; males : 170 cm) very similar to that of the reference population (160 and 172 cm, respectively). The same is observed for weight. However, growth retardation is observed at puberty, more frequently in males (10.8%) than in females (7.8%). Mean age at menarche is 14 years 5 months (13 years 10 months in the reference population). In males, it may be associated with insufficient treatment. This is not the case in females. There is no correlation between growth and glycosylated hemoglobin. No correlation with familial socio-economic level was found.