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Venkataraman A, Sieber JR, Schmidt AW, Waldron C, Theis KR, Schmidt TM. Variable responses of human microbiomes to dietary supplementation with resistant starch. MICROBIOME 2016; 4:33. [PMID: 27357127 PMCID: PMC4928258 DOI: 10.1186/s40168-016-0178-x] [Citation(s) in RCA: 251] [Impact Index Per Article: 27.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2016] [Accepted: 06/10/2016] [Indexed: 05/20/2023]
Abstract
BACKGROUND The fermentation of dietary fiber to various organic acids is a beneficial function provided by the microbiota in the human large intestine. In particular, butyric acid contributes to host health by facilitating maintenance of epithelial integrity, regulating inflammation, and influencing gene expression in colonocytes. We sought to increase the concentration of butyrate in 20 healthy young adults through dietary supplementation with resistant starch (unmodified potato starch-resistant starch (RS) type 2). METHODS Fecal samples were collected from individuals to characterize butyrate concentration via liquid chromatography and composition of the microbiota via surveys of 16S rRNA-encoding gene sequences from the Illumina MiSeq platform. Random Forest and LEfSe analyses were used to associate responses in butyrate production to features of the microbiota. RESULTS RS supplementation increased fecal butyrate concentrations in this cohort from 8 to 12 mmol/kg wet feces, but responses varied widely between individuals. Individuals could be categorized into three groups based upon butyrate concentrations before and during RS: enhanced, high, and low (n = 11, 3, and 6, respectively). Fecal butyrate increased by 67 % in the enhanced group (from 9 to 15 mmol/kg), while it remained ≥11 mmol/kg in the high group and ≤8 mmol/kg in the low group. Microbiota analyses revealed that the relative abundance of RS-degrading organisms-Bifidobacterium adolescentis or Ruminococcus bromii-increased from ~2 to 9 % in the enhanced and high groups, but remained at ~1.5 % in the low group. The lack of increase in RS-degrading bacteria in the low group may explain why there was no increase in fecal butyrate in response to RS. The microbiota of individuals in the high group were characterized by an elevated abundance of the butyrogenic microbe Eubacterium rectale (~6 % in high vs. 3 % in enhanced and low groups) throughout the study. CONCLUSIONS We document the heterogeneous responses in butyrate concentrations upon RS supplementation and identify characteristic of the microbiota that appear to underlie this variation. This study complements and extends other studies that call for personalized approaches to manage beneficial functions provided by gut microbiomes.
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Raghunandan D, Ravishankar B, Sharanbasava G, Mahesh DB, Harsoor V, Yalagatti MS, Bhagawanraju M, Venkataraman A. Anti-cancer studies of noble metal nanoparticles synthesized using different plant extracts. Cancer Nanotechnol 2011; 2:57-65. [PMID: 26069485 PMCID: PMC4451508 DOI: 10.1007/s12645-011-0014-8] [Citation(s) in RCA: 96] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2011] [Accepted: 04/26/2011] [Indexed: 01/13/2023] Open
Abstract
Biofunctionalized gold and silver nanoparticles synthesized using different plant extracts of guava and clove in vitro anti-cancer efficacy against four different cancer cell lines human colorectal adenocarcinoma, human kidney, human chronic myelogenous, leukemia, bone marrow, and human cervix have been studied and reported. The present experimental study suggests that flavonoids functionalized gold nanoparticles synthesized using aqueous clove buds extract are more potential than guava leaf extract towards anti-cancer activities. The microscopic and 2,3-bis (2-methoxy-4-nitro-5-sulfophenyl)-5-[(phenylamino)carbonyl]-2H-tetrazolium hydroxide (XTT) assay infer that the functionalized irregular shaped gold nanoparticles synthesized with aqueous clove bud extract showed a satisfactory anti-cancer effect on all the cell lines. The silver nanoparticles synthesized using same extracts are devoid of anti-cancer activity. The XTT assay revealed dose-dependent cytotoxicity to cancer cell lines. The study revealed that the free radicals generated by gold nanoparticles are responsible for anti-cancer effect. To confirm the free-radical scavenging efficacy of gold nanoparticle, nitric oxide assay is followed. We observed that the gold nanoparticles swabbed the free radicals in dose-dependent manner. With continued improvements, these nanoparticles may prove to be potential anti-cancer agents.
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Mallikarjuna NN, Manohar SK, Kulkarni PV, Venkataraman A, Aminabhavi TM. Novel high dielectric constant nanocomposites of polyaniline dispersed with γ-Fe2O3 nanoparticles. J Appl Polym Sci 2005. [DOI: 10.1002/app.21405] [Citation(s) in RCA: 76] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Lazarus P, Brazier A, Hessels JWT, Karako-Argaman C, Kaspi VM, Lynch R, Madsen E, Patel C, Ransom SM, Scholz P, Swiggum J, Zhu WW, Allen B, Bogdanov S, Camilo F, Cardoso F, Chatterjee S, Cordes JM, Crawford F, Deneva JS, Ferdman R, Freire PCC, Jenet FA, Knispel B, Lee KJ, Leeuwen JV, Lorimer DR, Lyne AG, McLaughlin MA, Siemens X, Spitler LG, Stairs IH, Stovall K, Venkataraman A. ARECIBO PULSAR SURVEY USING ALFA. IV. MOCK SPECTROMETER DATA ANALYSIS, SURVEY SENSITIVITY, AND THE DISCOVERY OF 40 PULSARS. ACTA ACUST UNITED AC 2015. [DOI: 10.1088/0004-637x/812/1/81] [Citation(s) in RCA: 65] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Raghunandan D, Basavaraja S, Mahesh B, Balaji S, Manjunath SY, Venkataraman A. Biosynthesis of Stable Polyshaped Gold Nanoparticles from Microwave-Exposed Aqueous Extracellular Anti-malignant Guava (Psidium guajava) Leaf Extract. ACTA ACUST UNITED AC 2009. [DOI: 10.1007/s12030-009-9030-8] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Bhat R, Sharanabasava V, Deshpande R, Shetti U, Sanjeev G, Venkataraman A. Photo-bio-synthesis of irregular shaped functionalized gold nanoparticles using edible mushroom Pleurotus florida and its anticancer evaluation. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2013; 125:63-9. [DOI: 10.1016/j.jphotobiol.2013.05.002] [Citation(s) in RCA: 61] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2013] [Revised: 04/11/2013] [Accepted: 05/06/2013] [Indexed: 10/26/2022]
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Manjunath BR, Venkataraman A, Stephen T. The effect of moisture present in polymers on their X-ray diffraction patterns. J Appl Polym Sci 1973. [DOI: 10.1002/app.1973.070170407] [Citation(s) in RCA: 58] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Yang D, Pelphrey KA, Sukhodolsky DG, Crowley MJ, Dayan E, Dvornek NC, Venkataraman A, Duncan J, Staib L, Ventola P. Brain responses to biological motion predict treatment outcome in young children with autism. Transl Psychiatry 2016; 6:e948. [PMID: 27845779 PMCID: PMC5314125 DOI: 10.1038/tp.2016.213] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/11/2016] [Revised: 07/26/2016] [Accepted: 09/27/2016] [Indexed: 01/14/2023] Open
Abstract
Autism spectrum disorders (ASDs) are common yet complex neurodevelopmental disorders, characterized by social, communication and behavioral deficits. Behavioral interventions have shown favorable results-however, the promise of precision medicine in ASD is hampered by a lack of sensitive, objective neurobiological markers (neurobiomarkers) to identify subgroups of young children likely to respond to specific treatments. Such neurobiomarkers are essential because early childhood provides a sensitive window of opportunity for intervention, while unsuccessful intervention is costly to children, families and society. In young children with ASD, we show that functional magnetic resonance imaging-based stratification neurobiomarkers accurately predict responses to an evidence-based behavioral treatment-pivotal response treatment. Neural predictors were identified in the pretreatment levels of activity in response to biological vs scrambled motion in the neural circuits that support social information processing (superior temporal sulcus, fusiform gyrus, amygdala, inferior parietal cortex and superior parietal lobule) and social motivation/reward (orbitofrontal cortex, insula, putamen, pallidum and ventral striatum). The predictive value of our findings for individual children with ASD was supported by a multivariate pattern analysis with cross validation. Predicting who will respond to a particular treatment for ASD, we believe the current findings mark the very first evidence of prediction/stratification biomarkers in young children with ASD. The implications of the findings are far reaching and should greatly accelerate progress toward more precise and effective treatments for core deficits in ASD.
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Knispel B, Allen B, Cordes JM, Deneva JS, Anderson D, Aulbert C, Bhat NDR, Bock O, Bogdanov S, Brazier A, Camilo F, Champion DJ, Chatterjee S, Crawford F, Demorest PB, Fehrmann H, Freire PCC, Gonzalez ME, Hammer D, Hessels JWT, Jenet FA, Kasian L, Kaspi VM, Kramer M, Lazarus P, van Leeuwen J, Lorimer DR, Lyne AG, Machenschalk B, McLaughlin MA, Messenger C, Nice DJ, Papa MA, Pletsch HJ, Prix R, Ransom SM, Siemens X, Stairs IH, Stappers BW, Stovall K, Venkataraman A. Pulsar Discovery by Global Volunteer Computing. Science 2010; 329:1305. [DOI: 10.1126/science.1195253] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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Divakaran P, Venkataraman A. Effect of dietary fats on oxidative phosphorylation and fatty acid profile of rat liver mitochondria. J Nutr 1977; 107:1621-31. [PMID: 894359 DOI: 10.1093/jn/107.9.1621] [Citation(s) in RCA: 36] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Abstract
Hydrogenated coconut oil or safflower seed oil were fed at 20% levels to weanling male albino rats for 2 months. The fatty acid patterns of the liver homogenates, mitochondria and the microsomes were determined by gas chromatography as were also the fatty acid patterns of the liver cholesterol esters and the phospholipids. The mitochondrial phospholipids were fractionated by thin layer chromatography and the fatty acid moieties of the individual phospholipids were screened on a gas chromatograph. The oxidative phosphorylation in the liver mitochondria was determined using glutamate, malate and succinate as substrates. The liver fatty acid pattern, especially that of the subcellular particles, seemed to be dependent upon the dietary fat. The fatty acid composition of the mitochondrial phospholipids varied with the dietary fat. Oxidative phosphorylation for glutamate and malate was higher in the group fed safflower oil compared to that in the group fed saturated fat; in the case of succinate, no such difference was noticed. These results suggest that the changes in the phosphorylation capacity are due to the changes in the mitochondrial phospholipids which reflect the composition of the dietary fat.
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Ganachari SV, Bhat R, Deshpande R, Venkataraman A. Extracellular Biosynthesis of Silver Nanoparticles Using Fungi Penicillium diversum and Their Antimicrobial Activity Studies. BIONANOSCIENCE 2012. [DOI: 10.1007/s12668-012-0046-5] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Bhat R, Ganachari S, Deshpande R, Ravindra G, Venkataraman A. Rapid Biosynthesis of Silver Nanoparticles Using Areca Nut (Areca catechu) Extract Under Microwave-Assistance. J CLUST SCI 2012. [DOI: 10.1007/s10876-012-0519-2] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Basavaraja C, Pierson R, Huh DS, Venkataraman A, Basavaraja S. Studies on properties of polyaniline-dodecylbenzene sulfonic acid composite films synthesized using different oxidants. Macromol Res 2009. [DOI: 10.1007/bf03218917] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Pande S, H S, D. Bedre M, Bhat R, Deshpande R, Venkataraman A. Synthesis, Characterization and Studies of PANI-MMT Nanocompoisites. ACTA ACUST UNITED AC 2012. [DOI: 10.5923/j.nn.20120204.01] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Nouraei SAR, Randhawa PS, Koury EF, Abdelrahim A, Butler CR, Venkataraman A, Howard DJ, Sandhu GS. Validation of the Clinical COPD Questionnaire as a psychophysical outcome measure in adult laryngotracheal stenosis. Clin Otolaryngol 2009; 34:343-8. [PMID: 19673982 DOI: 10.1111/j.1749-4486.2009.01969.x] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
OBJECTIVES To validate the Clinical Chronic Obstructive Pulmonary Disease Questionnaire (CCQ), a patient-administered instrument developed for bronchopulmonary disease as a disease-specific psychophysical outcome measure for adult laryngotracheal stenosis. DESIGN Prospective observational study. SETTINGS Tertiary/National referral airway reconstruction centre. PARTICIPANTS Thirty-three tracheostomy-free patients undergoing endoscopic laryngotracheoplasty. MAIN OUTCOME MEASURES CCQ and the Medical Research Council (MRC) Dyspnoea scale, a previously validated but more limited scale, were administered to patients 2 weeks before surgery, preoperatively, and 2 weeks after endoscopic laryngotracheoplasty. Pulmonary function was assessed preoperatively. Internal consistency was assessed with Cronbach alpha statistics and test-retest reliability was determined using intraclass correlation. Correlations between CCQ and MRC scale, and pulmonary function were used to assess convergent and divergent validity respectively. Instrument responsiveness was assessed by correlating total and domain-specific CCQ scores with anatomical disease severity and post-treatment effect size. RESULTS There were 12 males and 21 females. Mean age was 44 +/- 15 years. Cronbach alpha coefficient and intraclass correlation coefficient were 0.88 and 0.95 respectively. Total and domain-specific CCQ scores significantly correlated with the MRC scores (P < 0.001) and significant correlations between CCQ and peak expiratory flow rate and FEV(1) were identified (P < 0.03). There were statistically significant changes in total and domain-specific CCQ scores when different stenosis severities were compared. Clinical COPD Questionnaire scores also changed significantly and congruently following surgery (P < 0.05 in both cases). DISCUSSION Clinical COPD Questionnaire is a valid and sensitive instrument for assessing symptom severity and levels of function and well-being in adult patients with laryngotracheal stenosis and can be used as a patient-centred disease-specific outcome measure for this condition.
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Bedre MD, Basavaraja S, Deshpande R, Balaji DS, Venkataraman A. Preparation and Characterization of Polypyrrole Silver Nanocomposites via Interfacial Polymerization. INT J POLYM MATER PO 2010. [DOI: 10.1080/00914031003760642] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Mallikarjuna NN, Venkataraman A, Aminabhavi TM. A study on ?-Fe2O3 loaded poly(methyl methacrylate) nanocomposites. J Appl Polym Sci 2004. [DOI: 10.1002/app.21144] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Govindaraj B, Sastry NV, Venkataraman A. Thermal and morphological studies on ?-Fe2O3 polystyrene composites and the affect of additives. J Appl Polym Sci 2004. [DOI: 10.1002/app.20425] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Subramanian DR, Venkataraman A, Bhat NV. Effect of swelling agents on the structure and properties of nylon 6 filaments. J MACROMOL SCI B 2006. [DOI: 10.1080/00222348008241377] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Vijayanand HV, Arunkumar L, Gurubasawaraj PM, Sharma PMV, Basavaraja S, Saleem A, Venkataraman A, Ghanwat A, Maldar NN. Synthesis and characterization of polyimide-γ-Fe2O3 nanocomposites. J Appl Polym Sci 2006. [DOI: 10.1002/app.25186] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Vijayadarshan P, Mohan T, Viswanath J, Venugopal KJ, Rao NV, Gupta A, Venkataraman A. Large Scale Synthesis of Nickel Oxide (Nio) by Self Propagated Combustion Reaction. ACTA ACUST UNITED AC 2017. [DOI: 10.13005/msri/140106] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
This is a report on large scale synthesis of nickel oxide (NiO) using polyethylene glycol as a fuel employing self-propagating combustion reaction with nickel oxalate as precursor. The synthesized NiO is characterized for its crystal structure, morphology and bonding via XRD, SEM and FTIR respectively. Thermal behavior of the synthesized NiO is studied employing TGA and DSC. Super paramagnetic behavior of the synthesized is studied by magnetic hysteresis.
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el-Omar MM, Hargreaves MR, Venkataraman A, Been M. Coronary ventricular fistula as a complication of PTCA: a case report and literature review. Int J Cardiol 1995; 51:113-6. [PMID: 8522405 DOI: 10.1016/0167-5273(95)02417-u] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
A 58-year-old man with previous myocardial infarction and coronary bypass surgery underwent angioplasty to a totally occluded venous graft to the left anterior descending artery (LAD). The procedure resulted in a coronary-ventricular fistula. Prolonged inflation of the balloon in the proximal part of the graft resulted in obliteration of the fistula with little haemodynamic compromise.
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Manjunath BR, Venkataraman A. Fibrillar aggregation in cotton cellulose subjected to multiple swelling treatments with alkali. ACTA ACUST UNITED AC 1980. [DOI: 10.1002/pol.1980.170180424] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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