Crop and landscape heterogeneity increase biodiversity in agricultural landscapes: A global review and meta-analysis

Agricultural intensification not only increases food production but also drives widespread biodiversity decline. Increasing landscape heterogeneity has been suggested to increase biodiversity across habitats, while increasing crop heterogeneity may support biodiversity within agroecosystems. These spatial heterogeneity effects can be partitioned into compositional (land-cover type diversity) and configurational heterogeneity (land-cover type arrangement), measured either for the crop mosaic or across the landscape for both crops and semi-natural habitats. However, studies have reported mixed responses of biodiversity to increases in these heterogeneity components across taxa and contexts. Our meta-analysis covering 6397 fields across 122 studies conducted in Asia, Europe, North and South America reveals consistently positive effects of crop and landscape heterogeneity, as well as compositional and configurational heterogeneity for plant, invertebrate, vertebrate, pollinator and predator biodiversity. Vertebrates and plants benefit more from landscape heterogeneity, while invertebrates derive similar benefits from both crop and landscape heterogeneity. Pollinators benefit more from configurational heterogeneity, but predators favour compositional heterogeneity. These positive effects are consistent for invertebrates and vertebrates in both tropical/subtropical and temperate agroecosystems, and in annual and perennial cropping systems, and at small to large spatial scales. Our results suggest that promoting increased landscape heterogeneity by diversifying crops and semi-natural habitats, as suggested in the current UN Decade on Ecosystem Restoration, is key for restoring biodiversity in agricultural landscapes.

Protecting China's major urban bird diversity hotspots

The Kunming-Montreal Global Biodiversity Framework puts forward a new conservation target to enhance urban biodiversity. Cities have a great potential for sustaining biodiversity and nurturing a healthy relationship between people and our nearest nature. It is especially important in developing countries such as China, which has a rich biodiversity and a rapidly growing urban population. Using citizen science data, we show that 48% of the national bird diversity and 42% of its threatened species have been recorded in the top-20 most avian-diverse cities of China. Urban bird diversity hotspots clustered along the eastern coast, indicating the importance of establishing an inter-city conservation network along the East Asian-Australasian Flyway. This urban conservation network would be a starting point to promote social recognition of biodiversity's relational value in a country with a vast population and an increasingly important role in meeting UN's Sustainable Development Goals.

A migratory divide spanning two continents is associated with genomic and ecological divergence

Migratory divides are contact zones between breeding populations with divergent migratory strategies during the nonbreeding season. These locations provide an opportunity to evaluate the role of seasonal migration in the maintenance of reproductive isolation, particularly the relationship between population structure and features associated with distinct migratory strategies. We combine light-level geolocators, genomic sequencing, and stable isotopes to investigate the timing of migration and migratory routes of individuals breeding on either side of a migratory divide coinciding with genomic differentiation across a hybrid zone between barn swallow (Hirundo rustica) subspecies in China. Individuals west of the hybrid zone, with H. r. rustica ancestry, had comparatively enriched stable-carbon and hydrogen isotope values and overwintered in eastern Africa, whereas birds east of the hybrid zone, with H. r. gutturalis ancestry, had depleted isotope values and migrated to southern India. The two subspecies took divergent migratory routes around the high-altitude Karakoram Range and arrived on the breeding grounds over 3 weeks apart. These results indicate that assortative mating by timing of arrival and/or selection against hybrids with intermediate migratory traits may maintain reproductive isolation between the subspecies, and that inhospitable geographic features may have contributed to the diversification of Asian avifauna by influencing migratory patterns.

Trade-offs between economic development and biodiversity conservation on a tropical island

Resolving trade-offs between economic development and biodiversity conservation needs is one of the defining issues of our time. This is crucial in currently developing countries and in particularly sensitive systems harboring high biodiversity. Yet, such a task can be challenging as human activities may have complex effects on biodiversity. Here we assessed the effects of intense economic development on different components of biodiversity using Hainan Island (South China) as model. This highly biodiverse tropical island has experienced intense economic development and extensive forest to agriculture conversion and urbanization across the last two decades. We characterized three main habitat clusters, based on local land use, climate and economic changes across 145 grids (10×10 km), and estimated avian biodiversity responses between 1998 and 2013. We recorded ongoing taxonomic biotic homogenization at the regional scale (i.e., the whole island), evidenced by decreasing differences between traditional and directional alpha diversity. Communities became overall phylogenetically clustered and functionally overdispersed. Biodiversity's priority effects were pervasive, with less diverse communities showing positive and more diverse communities showing negative biodiversity changes. Finally, at the local scale, different economic and environmental indicators showed complex and divergent effects across habitat clusters and biodiversity components. These effects were only partially ameliorated within a newly established Ecological Function Conservation Area in the mountainous central part of the island. Thus, our results depict complex effects of economic development on different biodiversity dimensions in different areas of the island with different land uses and protection regimes, and between local and regional spatial scales. Profound ecosystem damage associated with economic development was partially averted, probably due to enhanced biodiversity conservation policies and law enforcement, yet at the cost of regional-scale biotic homogenization and local-scale biodiversity loss. This article is protected by copyright. All rights reserved.

Avian predators taste reject mimetic prey in relation to their signal reliability

Aposematic organisms defend themselves through various means to increase their unprofitability to predators which they advertise with conspicuous warning signals. Predators learn to avoid aposematic prey through associative learning that leads to lower predation. However, when these visual signals become unreliable (e.g., through automimicry or Batesian mimicry), predators may switch from using visual signals to taste sampling prey to choose among them. In this experiment, we tested this possibility in a field experiment where we released a total of 4800 mealworm prey in two clusters consisting of either: (i) undefended prey (injected with water) and (ii) model-mimics (injected with either quinine sulphate [models] or water [mimics]). Prey were deployed at 12 sites, with the mimic frequency of the model-mimics ranging between 0 and 1 (at 0.2 intervals). We found that taste rejection peaked at moderate mimic frequencies (0.4 and 0.6), supporting the idea that taste sampling and rejection of prey is related to signal reliability and predator uncertainty. This is the first time that taste-rejection has been shown to be related to the reliability of prey signals in a mimetic prey system.

How to Become a Generalist Species? Individual Niche Variation Across Habitat Transformation Gradients

Species in transformed habitats, frequently labeled as environmental generalists, tend to show broader niches than species in natural habitats. However, how population niche expansion translates into changes in the niches of individual organisms remains unclear, particularly in the context of habitat transformation. Niche expansion could be a product of individuals having broader niches, greater distances among individuals’ niches, or a combination of both processes. This would challenge the traditional conceptions on niche dynamics, which emphasize the role played by individual specialization (IS). Here, using stable isotopes, we computed total niche width (TNW), its within- and between-individual components (WIC and BIC), and IS (the ratio WIC/TNW), in 13 populations of 6 bird species and 8 populations of 3 frog species in natural and transformed habitats. We confirmed that species had broader niche width in transformed than in natural habitats, yet population niche expansion across habitats was mainly a product of increased distance between individuals. Within each habitat type, increases in TNW were linked to increases in WIC for all habitat types, while relationships between TNW and BIC were found in transformed but not in natural habitats. Hence, both increased individual niche width and increased distance among individuals were apparent within habitats, particularly in transformed ones, where increases in WIC dominated. Neither across or within habitats was niche expansion associated with increasing IS. Therefore, our results overturn traditional conceptions associated with the niche variation hypothesis and illustrate that niche expansion is not invariably associated with increased IS, because the distance between individual’s niches (BIC) can increase, as well as the breadth of those niches (WIC).

The truth is in the detail: predators attack aposematic prey with less aggression than other prey types

Aposematic organisms are often unprofitable to predators (e.g. because of defensive chemicals) which they advertise with a conspicuous signal (e.g. bright and conspicuous colour signals). Aposematism is thought to reduce predation of prey because the colour signal increases the ability of predators to learn, recognize and remember the prey’s defensive properties. The efficacy of aposematism has been extensively documented in laboratory studies, although its benefits seem to be harder to demonstrate in the field. In this study, we compared the levels of partial and overall predation among four prey types (undefended and cryptic, undefended and warning coloured, defended and cryptic, and aposematic prey). Overall, predation of warning coloured and defended (aposematic) prey was lower than the predation for cryptic and undefended prey; however, it was the same as predation of cryptic and defended prey. Moreover, aposematic prey had higher levels of partial predation (where prey was not wholly consumed by the predator) and lower attack intensities. This suggests that prey were being taste sampled, but also might be better able to survive attacks. Therefore, the benefits of aposematism may lie not only in reducing outright predation, but also in altering a predator’s post-attack behaviour, thus leading to greater escape opportunities and post-attack survival of prey. These results reinforce the importance of examining predation in more detail rather than simply examining attack rates.

Genetic, phenotypic and ecological differentiation suggests incipient speciation in two Charadrius plovers along the Chinese coast

Background

Speciation with gene flow is an alternative to the nascence of new taxa in strict allopatric separation. Indeed, many taxa have parapatric distributions at present. It is often unclear if these are secondary contacts, e.g. caused by past glaciation cycles or the manifestation of speciation with gene flow, which hampers our understanding of how different forces drive diversification. Here we studied genetic, phenotypic and ecological aspects of divergence in a pair of incipient shorebird species, the Kentish (Charadrius alexandrinus) and the White-faced Plovers (C. dealbatus), shorebirds with parapatric breeding ranges along the Chinese coast. We assessed divergence based on molecular markers with different modes of inheritance and quantified phenotypic and ecological divergence in aspects of morphometric, dietary and climatic niches.

Results

Our integrative analyses revealed small to moderate levels of genetic and phenotypic distinctiveness with symmetric gene flow across the contact area at the Chinese coast. The two species diverged approximately half a million years ago in dynamic isolation with secondary contact occurring due to cycling sea level changes between the Eastern and Southern China Sea in the mid-late Pleistocene. We found evidence of character displacement and ecological niche differentiation between the two species, invoking the role of selection in facilitating divergence despite gene flow.

Conclusion

These findings imply that ecology can indeed counter gene flow through divergent selection and thus contributes to incipient speciation in these plovers. Furthermore, our study highlights the importance of using integrative datasets to reveal the evolutionary history and assist the inference of mechanisms of speciation.

Electronic supplementary material

The online version of this article (10.1186/s12862-019-1449-5) contains supplementary material, which is available to authorized users.

Breath rate of passerines across an urbanization gradient supports the pace-of-life hypothesis and suggests diet-mediated responses to handling stress

The pace-of-life hypothesis predicts no impact of urbanization on stress responses. Accordingly, several studies have been inconsistent in showing differences in breath rate (BR), a proxy of acute stress responses to handling in passerines, between rural and urban areas. However, this evidence is limited to a single bird species and a limited geographic region (SW Europe). No study addressed whether this pattern is also apparent in other species or regions, such as in tropical environments, or whether it is dependent on the level of diet specialization, given that diet restriction and change influence stress responses. Here, we tested whether there were differences in BR between habitats and diet groups using eight highly diverse passerine assemblages experiencing different levels of anthropogenic disturbance (i.e., natural, rural, and urban locations) in SW China. We predicted that insectivores and herbivores (frugivores, nectarivores, and seed-eating species) would show higher BR than omnivores. We also predicted no differences in BR among habitat types. BR was a moderately repeatable trait, which showed a negative relationship with body mass and a positive relationship with the time of the day. We also recorded a relatively strong phylogenetic bias in the expression of this trait. Confirming our predictions, our results showed no differences in BR among natural, rural, and urban locations. Similarly, within species, there were no differences in BR between rural and urban locations. However, we also found that herbivores showed higher BR than omnivores. Overall, our results provide support to the pace-of-life hypothesis, but suggest acute stress responses can be diet-mediated, which may help to explain the marked decline of specialized trophic guilds around the world in response to anthropogenic disturbance.

Age and sex differences in niche use at molt and its effect on plumage coloration characteristics in a bird

Bird plumage is often very colorful and can communicate the quality of the bearer to conspecifics. These plumage-based signals of quality are composed of multiple pigments (e.g., melanin and carotenoids). Therefore, sex and age classes, which often show marked differences in plumage coloration, may have different dietary needs for the different plumage components and this might promote preferences for different dietary niches at different molting stages. However, no study has addressed the role that changes in niche use play in the expression of multiple component plumage signals in birds. We used stable isotope analysis to test the hypothesis that niche use is related to age and sex and to differently cultured plumage patches, yellow carotenoid-based and black melanin-based, in great tits Parus major. We recorded high niche overlap between plumage patches, although δ¹⁵N was higher in black than yellow plumage. Niche overlap was relatively low for age classes and relatively high for sex classes, and age classes showed a contrasting pattern of niche overlap between carotenoid- and melanin-based plumages. Moreover, δ¹³C, but not δ¹⁵N, had a significant negative relationship with carotenoid-based plumage, which was only apparent in juveniles. Taken together, our results demonstrate that niche use had a moderate influence on plumage coloration characteristics of great tit individuals, mostly associated with δ¹³C rather than with δ¹⁵N and with age rather than with sex. Therefore, our study is significant because it confirms the relevance of niche use during ornament production in free-living birds.

To be so bold: boldness is repeatable and related to within individual behavioural variability in North Island robins

Behavioural research traditionally focusses on the mean responses of a group of individuals rather than variation in behaviour around the mean or among individuals. However, examining the variation in behaviour among and within individuals may also yield important insights into the evolution and maintenance of behaviour. Repeatability is the most commonly used measure of variability among individuals in behavioural research. However, there are other forms of variation within populations that have received less attention. One such measure is intraindividual variation in behaviour (IIV), which is a short-term fluctuation of within-individual behaviour. Such variation in behaviour might be important during interactions because it could decrease the ability of conspecific and heterospecific individuals to predict the behaviour of the subject, thus increasing the cost of the interaction. In this experiment, we made repeated measures of the latency of North Island robins to attack a prey in a novel situation (a form of boldness) and examined (i) repeatability of boldness (the propensity to take a risk), (ii) IIV of boldness, and (iii) whether there was a significant relationship between these two traits (a behavioural syndrome). We found that boldness was highly repeatable, that there were high levels of IIV in boldness, and that there was a negative relationship between boldness and IIV in boldness. This suggests that despite high levels of repeatability for this behaviour, there were also still significant differences in IIV among different individuals within the population. Moreover, bolder individuals had significantly less IIV in their boldness, which suggests that they were forming routines (which reduces behavioural variability) compared to shyer individuals. Our results definitively demonstrate that IIV itself varies across individuals and is linked with key behavioural traits, and we argue for the importance of future studies aimed at understanding its causes and consequences for behavioural interactions.

Diet specialization in a generalist population: the case of breeding great tits Parus major in the Mediterranean area

The analysis of diet specialization provides key information on how different individuals deal with similar food and habitat constraints within populations. Characterizing parental diet specialization at the moment of breeding, and the consistency of these preferences under different levels of effort, may help us to understand why parents exploit alternative resources. We investigated these questions in a species commonly considered a generalist: a breeding population of Mediterranean great tits Parus major. Our aim was to determine whether they are specialists or generalists at the pair level, and the consistency of this behaviour under different levels of effort. Using proportional similarity and mean pairwise overlap indices, we found that parents showed great variability in prey selection between territories. That is, they displayed a small niche overlap. Interestingly, the most specialized breeding pairs showed a tendency to have larger broods. Additionally, we experimentally manipulated brood size and found that parents showed high short-term consistency in their foraging behaviour. They precisely adjusted the number of provisioning trips to the number of nestlings, while they were unable to modify prey proportions or prey size after brood size was changed. We can therefore characterize their foraging strategies as highly consistent. Our results suggest that although the great tit may be considered a generalist at the species or population level, there was a tendency for trophic specialization among breeding pairs. This high inter- and intrapopulation plasticity could account for their great success and wide distribution.

The diet of Great Tit Parus major nestlings in a Mediterranean Iberian forest: the important role of spiders

The diet of the Great Tit Parus major when rearing chicks has been described in many studies. However, data from the Mediterranean area is scarce. Here we describe the diet of nestlings in a population of Great Tits in a Mediterranean forest in Barcelona (north–east Spain) during two breeding seasons using two methods: neck–collars and video recording. The main prey were caterpillars (44% from neck–collar data and 62% from video–recorded data), but in our latitudes spiders also seemed to be an important food resource (24% from neck–collar data and 42% from video–recorded data). We did not find any significant differences in the quantity of spiders collected by parents in relation to stage of chick development, main vegetation surrounding nest boxes, size of the brood, or year. Our results stress the importance of spiders as a food source in Mediterranean habitats.