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Park J, Ngo TH, Paudel SB, Kil YS, Ryoo GH, Jin CH, Choi HI, Jung CH, Na M, Nam JW, Han AR. Angular dihydropyranocoumarins from the flowers of Peucedanum japonicum and their aldo-keto reductase inhibitory activities. PHYTOCHEMISTRY 2024;219:113974. [PMID: 38211847 DOI: 10.1016/j.phytochem.2024.113974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Revised: 01/04/2024] [Accepted: 01/06/2024] [Indexed: 01/13/2024]
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Park J, Paudel SB, Jin CH, Lee G, Choi HI, Ryoo GH, Kil YS, Nam JW, Jung CH, Kim BR, Na MK, Han AR. Comparative Analysis of Coumarin Profiles in Different Parts of Peucedanum japonicum and Their Aldo-Keto Reductase Inhibitory Activities. Molecules 2022;27:7391. [PMID: 36364218 PMCID: PMC9657185 DOI: 10.3390/molecules27217391] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Revised: 10/27/2022] [Accepted: 10/27/2022] [Indexed: 03/13/2024]  Open
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Kim DG, Lyu JI, Kim JM, Seo JS, Choi HI, Jo YD, Kim SH, Eom SH, Ahn JW, Bae CH, Kwon SJ. Identification of Loci Governing Agronomic Traits and Mutation Hotspots via a GBS-Based Genome-Wide Association Study in a Soybean Mutant Diversity Pool. Int J Mol Sci 2022;23:10441. [PMID: 36142354 PMCID: PMC9499481 DOI: 10.3390/ijms231810441] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2022] [Revised: 09/05/2022] [Accepted: 09/07/2022] [Indexed: 11/25/2022]  Open
4
Kim SH, Kim SY, Ryu J, Jo YD, Choi HI, Kim JB, Kang SY. Suggested doses of proton ions and gamma-rays for mutation induction in 20 plant species. Int J Radiat Biol 2021;97:1624-1629. [PMID: 34402731 DOI: 10.1080/09553002.2021.1969053] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Choi HI, Han SM, Jo YD, Hong MJ, Kim SH, Kim JB. Effects of Acute and Chronic Gamma Irradiation on the Cell Biology and Physiology of Rice Plants. PLANTS (BASEL, SWITZERLAND) 2021;10:439. [PMID: 33669039 PMCID: PMC7996542 DOI: 10.3390/plants10030439] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Revised: 02/17/2021] [Accepted: 02/22/2021] [Indexed: 11/23/2022]
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Lee SW, Kwon YJ, Baek I, Choi HI, Ahn JW, Kim JB, Kang SY, Kim SH, Jo YD. Mutagenic Effect of Proton Beams Characterized by Phenotypic Analysis and Whole Genome Sequencing in Arabidopsis. FRONTIERS IN PLANT SCIENCE 2021;12:752108. [PMID: 34777430 PMCID: PMC8581144 DOI: 10.3389/fpls.2021.752108] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Accepted: 10/05/2021] [Indexed: 05/19/2023]
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Lee YS, Kim J, Woo S, Park JY, Park HS, Shim H, Choi HI, Kang JH, Lee TJ, Sung SH, Yang TJ, Kang KB. Assessing the genetic and chemical diversity of Taraxacum species in the Korean Peninsula. PHYTOCHEMISTRY 2021;181:112576. [PMID: 33166748 DOI: 10.1016/j.phytochem.2020.112576] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2020] [Revised: 10/19/2020] [Accepted: 10/24/2020] [Indexed: 05/12/2023]
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Choi HI, Lyu JI, Lee HO, Kim JB, Kim SH. Complete chloroplast genome sequence of an orchid hybrid Cymbidium sinense (♀) × C. goeringii (♂). MITOCHONDRIAL DNA PART B-RESOURCES 2020;5:3802-3803. [PMID: 33367106 PMCID: PMC7682733 DOI: 10.1080/23802359.2020.1839367] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
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Lee SI, Park JW, Kwon SJ, Jo YD, Hong MJ, Kim JB, Choi HI. Epigenetic Variation Induced by Gamma Rays, DNA Methyltransferase Inhibitors, and Their Combination in Rice. PLANTS 2020;9:plants9091088. [PMID: 32847097 PMCID: PMC7570246 DOI: 10.3390/plants9091088] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Revised: 08/16/2020] [Accepted: 08/19/2020] [Indexed: 02/07/2023]
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Jo YD, Ryu J, Kim YS, Kang KY, Hong MJ, Choi HI, Lim GH, Kim JB, Kim SH. Dramatic Increase in Content of Diverse Flavonoids Accompanied with Down-Regulation of F-Box Genes in a Chrysanthemum (Chrysanthemum × morifolium (Ramat.) Hemsl.) Mutant Cultivar Producing Dark-Purple Ray Florets. Genes (Basel) 2020;11:E865. [PMID: 32751443 PMCID: PMC7464468 DOI: 10.3390/genes11080865] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Revised: 07/24/2020] [Accepted: 07/28/2020] [Indexed: 11/16/2022]  Open
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Kim SH, Kim SW, Lim GH, Lyu JI, Choi HI, Jo YD, Kang SY, Kang BC, Kim JB. Transcriptome analysis to identify candidate genes associated with the yellow-leaf phenotype of a Cymbidium mutant generated by γ-irradiation. PLoS One 2020;15:e0228078. [PMID: 31995594 PMCID: PMC6988911 DOI: 10.1371/journal.pone.0228078] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2019] [Accepted: 01/07/2020] [Indexed: 11/23/2022]  Open
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Jung IJ, Ahn JW, Jung S, Hwang JE, Hong MJ, Choi HI, Kim JB. Overexpression of rice jacalin-related mannose-binding lectin (OsJAC1) enhances resistance to ionizing radiation in Arabidopsis. BMC PLANT BIOLOGY 2019;19:561. [PMID: 31852472 PMCID: PMC6921557 DOI: 10.1186/s12870-019-2056-8] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2019] [Accepted: 09/26/2019] [Indexed: 05/07/2023]
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Lee J, Waminal NE, Choi HI, Perumal S, Lee SC, Nguyen VB, Jang W, Kim NH, Gao LZ, Yang TJ. Rapid amplification of four retrotransposon families promoted speciation and genome size expansion in the genus Panax. Sci Rep 2017;7:9045. [PMID: 28831052 PMCID: PMC5567358 DOI: 10.1038/s41598-017-08194-5] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2017] [Accepted: 07/05/2017] [Indexed: 01/08/2023]  Open
14
Koo KM, Jung S, Lee BS, Kim JB, Jo YD, Choi HI, Kang SY, Chung GH, Jeong WJ, Ahn JW. The Mechanism of Starch Over-Accumulation in Chlamydomonas reinhardtii High-Starch Mutants Identified by Comparative Transcriptome Analysis. Front Microbiol 2017;8:858. [PMID: 28588557 PMCID: PMC5440458 DOI: 10.3389/fmicb.2017.00858] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2016] [Accepted: 04/27/2017] [Indexed: 11/24/2022]  Open
15
Jung IJ, Hwang JE, Han SM, Kim DS, Ahn JW, Choi HI, Kwon SJ, Kang SY, Kim JB. Molecular dissection of the response of the rice Systemic Acquired Resistance Deficient 1 (SARD1) gene to different types of ionizing radiation. Int J Radiat Biol 2017;93:717-725. [PMID: 28299960 DOI: 10.1080/09553002.2017.1297901] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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Jo YD, Ha Y, Lee JH, Park M, Bergsma AC, Choi HI, Goritschnig S, Kloosterman B, van Dijk PJ, Choi D, Kang BC. Fine mapping of Restorer-of-fertility in pepper (Capsicum annuum L.) identified a candidate gene encoding a pentatricopeptide repeat (PPR)-containing protein. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2016;129:2003-17. [PMID: 27470425 DOI: 10.1007/s00122-016-2755-6] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2016] [Accepted: 07/15/2016] [Indexed: 05/24/2023]
17
Waminal NE, Choi HI, Kim NH, Jang W, Lee J, Park JY, Kim HH, Yang TJ. A refined Panax ginseng karyotype based on an ultra-high copy 167-bp tandem repeat and ribosomal DNAs. J Ginseng Res 2016;41:469-476. [PMID: 29021693 PMCID: PMC5628329 DOI: 10.1016/j.jgr.2016.08.002] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2016] [Revised: 07/25/2016] [Accepted: 08/03/2016] [Indexed: 12/29/2022]  Open
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Lee KJ, Kim DS, Kim JB, Jo SH, Kang SY, Choi HI, Ha BK. Identification of candidate genes for an early-maturing soybean mutant by genome resequencing analysis. Mol Genet Genomics 2016;291:1561-71. [PMID: 27033554 DOI: 10.1007/s00438-016-1183-2] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2015] [Accepted: 02/15/2016] [Indexed: 10/22/2022]
19
Nguyen B, Kim K, Kim YC, Lee SC, Shin JE, Lee J, Kim NH, Jang W, Choi HI, Yang TJ. The complete chloroplast genome sequence of Panax vietnamensis Ha et Grushv (Araliaceae). Mitochondrial DNA A DNA Mapp Seq Anal 2015;28:85-86. [PMID: 26710166 DOI: 10.3109/19401736.2015.1110810] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Kim K, Lee SC, Lee J, Yu Y, Yang K, Choi BS, Koh HJ, Waminal NE, Choi HI, Kim NH, Jang W, Park HS, Lee J, Lee HO, Joh HJ, Lee HJ, Park JY, Perumal S, Jayakodi M, Lee YS, Kim B, Copetti D, Kim S, Kim S, Lim KB, Kim YD, Lee J, Cho KS, Park BS, Wing RA, Yang TJ. Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species. Sci Rep 2015;5:15655. [PMID: 26506948 PMCID: PMC4623524 DOI: 10.1038/srep15655] [Citation(s) in RCA: 145] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2015] [Accepted: 09/30/2015] [Indexed: 12/15/2022]  Open
21
Choi HI, Waminal NE, Park HM, Kim NH, Choi BS, Park M, Choi D, Lim YP, Kwon SJ, Park BS, Kim HH, Yang TJ. Major repeat components covering one-third of the ginseng (Panax ginseng C.A. Meyer) genome and evidence for allotetraploidy. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2014;77:906-16. [PMID: 24456463 DOI: 10.1111/tpj.12441] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2013] [Revised: 01/07/2014] [Accepted: 01/13/2014] [Indexed: 05/12/2023]
22
Kim NH, Choi HI, Kim KH, Jang W, Yang TJ. Evidence of genome duplication revealed by sequence analysis of multi-loci expressed sequence tag-simple sequence repeat bands in Panax ginseng Meyer. J Ginseng Res 2014;38:130-5. [PMID: 24748837 PMCID: PMC3986581 DOI: 10.1016/j.jgr.2013.12.005] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2013] [Revised: 12/30/2013] [Accepted: 12/31/2013] [Indexed: 11/20/2022]  Open
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Kim NH, Choi HI, Ahn IO, Yang TJ. EST-SSR Marker Sets for Practical Authentication of All Nine Registered Ginseng Cultivars in Korea. J Ginseng Res 2013;36:298-307. [PMID: 23717131 PMCID: PMC3659598 DOI: 10.5142/jgr.2012.36.3.298] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2012] [Revised: 04/04/2012] [Accepted: 04/04/2012] [Indexed: 11/30/2022]  Open
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Choi HI, Kim NH, Kim JH, Choi BS, Ahn IO, Lee JS, Yang TJ. Development of Reproducible EST-derived SSR Markers and Assessment of Genetic Diversity in Panax ginseng Cultivars and Related Species. J Ginseng Res 2013;35:399-412. [PMID: 23717085 PMCID: PMC3659560 DOI: 10.5142/jgr.2011.35.4.399] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2011] [Revised: 06/08/2011] [Accepted: 07/29/2011] [Indexed: 11/18/2022]  Open
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Kim NH, Choi HI, Ahn IO, Yang TJ. EST-SSR Marker Sets for Practical Authentication of All Nine Registered Ginseng Cultivars in Korea. J Ginseng Res 2012. [PMID: 23717131 DOI: 10.5142/jgr.2012.36.3.000] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/01/2023]  Open
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