Solid state structures and solution behaviour of tetranuclear lanthanide(III) carbonate-bridged coordination compounds of chiral 3 + 3 amine macrocycle

The linking of two dinuclear macrocyclic units of large triphenolic hexaazamine by two carbonate anions results in the formation of dimeric tetranuclear Sm(III), Eu(III) and Gd(III) complexes. These complexes were initially obtained serendipitously by fixation of atmospheric carbon dioxide and subsequently obtained in a rational way by the application of carbonate salts. The X-ray crystal structures of these isomorphic complexes show highly folded conformation of the macrocycle. This type of conformation is also confirmed by 2D NMR spectra of the Sm(III) complex. The ESI-MS and NMR spectra reveal also that these carbonate complexes exist in solution in two different forms that are in a concentration-dependent dynamic equilibrium.

Imine- and Amine-Type Macrocycles Derived from Chiral Diamines and Aromatic Dialdehydes

The condensation of aromatic dialdehydes with chiral diamines, such as 1,2-trans-diaminocyclohexane, leads to various enantiopure or meso-type macrocyclic Schiff bases, including [2 + 2], [3 + 3], [4 + 4], [6 + 6] and [8 + 8] condensation products. Unlike most cases of macrocycle synthesis, the [3 + 3] macrocycles of this type are sometimes obtained in high yields by direct condensation without a metal template. Macrocycles of other sizes from this family can often be selectively obtained in high yields by a suitable choice of metal template, solvent, or chirality of the building blocks. In particular, the application of a cadmium(II) template results in the expansion of the [2 + 2] macrocycles into giant [6 + 6] and [8 + 8] macrocycles. These imine macrocycles can be reduced to the corresponding macrocyclic amines which can act as hosts for the binding of multiple cations or multiple anions.

Sorting Phenomena and Chirality Transfer in Fluoride-Bridged Macrocyclic Rare Earth Complexes

The reaction of fluoride anions with mononuclear lanthanide(III) and yttrium(III) hexaaza-macrocyclic complexes results in the formation of dinuclear fluoride-bridged complexes. As indicated by X-ray crystal structures, in these complexes two metal ions bound by the macrocycles are linked by two or three bridging fluoride anions, depending on the type of the macrocycle. In the case of the chiral hexaaza-macrocycle L1 derived from trans-1,2-diaminocyclohexane, the formation of these μ2-fluorido dinuclear complexes is accompanied by enantiomeric self-recognition of macrocyclic units. In contrast, this kind of recognition is not observed in the case of complexes of the chiral macrocycle L2 derived from 1,2-diphenylethylenediamine. The reaction of fluoride with a mixture of mononuclear complexes of L1 and L2, containing two different Ln(III) ions, results in narcissistic sorting of macrocyclic units. Conversely, a similar reaction involving mononuclear complexes of L1 and complexes of achiral macrocycle L3 based on ethylenediamine results in sociable sorting of macrocyclic units and preferable formation of heterodinuclear complexes. In addition, formation of these heterodinuclear complexes is accompanied by chirality transfer from the chiral macrocycle L1 to the achiral macrocycle L3 as indicated by CPL and CD spectra.

Chirality transfer between hexaazamacrocycles in heterodinuclear rare earth complexes

Both the chiral hexaazamacrocyle L1 based on trans-1,2-diaminocyclohexane and the achiral hexaazamacrocyle L2 based on ethylenediamine form lanthanide(iii) dinuclear μ-hydroxo bridged complexes which have been characterized by NMR and CD spectroscopy. The homodinuclear complexes of the type [Ln₂(L1)₂(μ-OH)₂](NO₃)₄ (Ln = Nd^III, Eu^III, Tb^III and Yb^III) have been synthesized in the enantiopure form and the X-ray crystal structures of Nd^III, Eu^III and Yb^III derivatives have been determined. The heterodinuclear cationic complexes [Ln(L1)Ln'(L2)(μ-OH)₂X₂]ⁿ⁺ have been generated and characterized in solution by using the mononuclear complexes of L1 and L2 as substrates. While the formation of [LnLn'(L1)₂(μ-OH)₂X₂]ⁿ⁺ dinuclear complexes is accompanied by chiral narcissistic self-sorting, the formation of [Ln(L1)Ln'(L2)(μ-OH)₂X₂]ⁿ⁺ dinuclear complexes is accompanied by the sizable sociable self-sorting of macrocyclic units. The homodinuclear complexes [Y₂(L1)₂(μ-OH)₂X₂]ⁿ⁺ and [Ln₂(L2)₂(μ-OH)₂X₂]ⁿ⁺ (Ln = Dy^III, Pr^III and Nd^III) are CD silent in the visible region due to the lack of f-f transitions and the presence of an achiral ligand, respectively. In contrast, the heterodinuclear [Y(L1^S)Ln(L2)(μ-OH)₂X₂]ⁿ⁺ complexes give rise to CD signals arising from the f-f transitions because of the chirality transfer from the L1 macrocyclic unit to the L2 macrocyclic unit.

Chiral Cryptates Derived from a Hexaazamacrocycle

The reactions of hexaazamacrocycle 1 with 2,6-bis(bromomethyl)pyridine or 2,6-bis[(tosyloxy)methyl)]pyridine in the presence of appropriate carbonates result in the formation of derivatives of cryptand 6: enantiopure azacryptates of sodium and potassium. Crystal structures of these compounds indicate interaction of a metal ion with four pyridine nitrogen atoms and four tertiary amine atoms. The competition reactions monitored by NMR spectroscopy indicate preferential binding of Na⁺ over K⁺ as well as higher affinity of 6 for Na⁺ in comparison with the [2.2.1] cryptand.

Hexanuclear and Trinuclear Metal Complexes of a Giant Octadecaaza Macrocycle

A large macrocyclic ligand containing six pyridine fragments and six diaminocyclopentane fragments is able to form hexanuclear Zn(II) and Ni(II) complexes as well as a trinuclear Zn(II) complex. X-ray crystal structures of these complexes indicate quite different ligand conformations. In the hexanuclear Zn(II) derivative with chloride counteranions metal ions have a distorted-trigonal-bipyramidal geometry and occupy loop sections formed by the highly folded macrocycle, which adopts a globular shape. In the hexanuclear Ni(II) derivative with nitrate counteranions metal ions exhibit a distorted-octahedral geometry and the ligand conformation is much more open, while in the trinuclear Zn(II) complex the macrocycle wraps around the octahedral metal ions. The last highly entangled conformation of the trinuclear complex is also present in solution, as confirmed by the NOESY spectra. The NMR data indicate that the hexanuclear Zn(II) complex partially dissociates in water solutions to form the trinuclear complex, while the ¹H NMR titration of the free macrocycle with zinc(II) chloride indicates that the formation of a trinuclear complex corresponds to cooperative binding of metal ions.

Multinuclear Ni(ii), Cu(ii) and Zn(ii) complexes of chiral macrocyclic nonaazamine

Herein, we report the preparation and crystal structures of Ni(ii), Cu(ii) and Zn(ii) complexes. For both the Ni(ii) and Cu(ii) compounds, a magnetostructural correlation was established.

Lanthanide(iii) and lead(ii) complexes of a chiral nonaaza macrocyclic amine based on 1,2-diaminocyclopentane

We report the synthesis, spectroscopic characterization and X-ray crystal structures of a series of helical complexes of a new chiral macrocycle based on diaminocyclopentane fragments. In the case of a Pb(ii) derivative the NMR data indicate a dynamic process corresponding to partial wrapping and unwrapping of the macrocycle resulting in the switching of the helix axis.

Anion and solvent induced chirality inversion in macrocyclic lanthanide complexes

A series of the lanthanide(III) or yttrium(III) complexes of the type [LnL(NO3)(H2O)2](NO3)2, [LnL(NO3)(H2O)](NO3)2, [LnL(H2O)2](NO3)3, and [LnLCl(H2O)2]Cl2 where L is an all-R or all-S enantiomer (L(R) or L(S)) of the chiral hexaaza macrocycle, 2(R),7(R),18(R),23(R)- or 2(S),7(S),18(S),23(S)-1,8,15,17,24,31-hexaazatricyclo[25.3.1.1.0.0]-dotriaconta-10,12,14,26,28,30-hexaene, and Ln(III) = Sm(III), Tb(III), Ho(III), Er(III), Tm(III), Yb(III), Lu(III), or Y(III), have been synthesized and structurally characterized. The crystal structure of the free macrocycle shows a highly twisted molecule, preorganized for the formation of helical complexes. The crystal structures of the lanthanide(III) complexes show two different diastereomeric forms of the macrocycle with different configurations at the stereogenic amine nitrogen atoms: (RRRR) or (RSRS) (denoted as L(RI) and L(RII), respectively). The L(RI) diastereomeric form of the nitrate derivatives [LnL(NO3)(H2O)](NO3)2 (Ln = Ho, Er) and [LnL(H2O)2](NO3)3 (Ln = Tm, Yb, Lu) convert slowly to the L(RII) form in methanol or acetonitrile solutions, while this process is not observed for the L(RI) diastereomers of analogous chloride derivatives [LnL(H2O)2]Cl3 (Ln = Tm, Yb, Lu). On the other hand, the L(RI) → L(RII) conversion for these Tm(III), Yb(III), and Lu(III) chloride derivatives can be triggered by the addition of external nitrate anions. The circular dichroism (CD) and (1)H NMR data indicate initial fast exchange of axial chloride for axial nitrate ligand, followed by slow chirality inversion of the equatorial macrocyclic ligand.

Structural characterization and DFT calculation of the Fe–C coordinating bond in bis(tert-butyl isocyanide) iron(II) phthalocyanine

Bis(tert-butyl isocyanide) iron(II) phthalocyanine complex in the crystalline form was obtained by a direct reaction of β- FePc with tert-butyl isocyanide. This complex crystallizes in the centrosymmetric space group P 21/c of the monoclinic system. The Fe ( II ) cation is equatorially ligated by the four N-isoindole atoms of Pc2- macrocycle and axially by the C atom of tert-butyl isocyanide on both sides of a planar FePc molecule. Gas-phase conformation of the bis(tert-butyl isocyanide) iron(II) phthalocyanine molecule obtained by molecular orbital calculations shows a similar conformation as in the crystal. In both phases (solid and gas) a similar correlation between the equatorial Fe – N and axial Fe – C bonds are observed. Steric hindrance of the tert-butyl isocyanide molecules ligated to Fe in axial positions of planar FePc leads to the lowering of the π–π interaction between the π-clouds of Pc macrorings and makes the crystals of the bis(tert-butyl isocyanide) iron(II) phthalocyanine complex better soluble in the most organic solvents than the parent FePc compound. EPR and magnetic susceptibility measurements clearly show that ligation of the intermediate spin FePc by tert-butyl isocyanide leads to the change of the ground state from S = 1 (for FePc , eg3b2g2a1g1) to S = 0 yielding the low-spin complex (( CH 3)3 C - N ≡ C )2 FePc , eg4b2g2). The calculated three-dimensional MESP maps are helpful for understanding of the interaction between the FePc and tert-butyl isocyanide molecules forming bis(tert-butyl isocyanide) iron(II) phthalocyanine complex.

Contrasting enantioselective DNA preference: chiral helical macrocyclic lanthanide complex binding to DNA

There is great interest in design and synthesis of small molecules which selectively target specific genes to inhibit biological functions in which particular DNA structures participate. Among these studies, chiral recognition has been received much attention because more evidences have shown that conversions of the chirality and diverse conformations of DNA are involved in a series of important life events. Here, we report that a pair of chiral helical macrocyclic lanthanide (III) complexes, (M)-Yb[L_SSSSSS]³⁺ and (P)-Yb[L_RRRRRR]³⁺, can enantioselectively bind to B-form DNA and show remarkably contrasting effects on GC-rich and AT-rich DNA. Neither of them can influence non-B-form DNA, nor quadruplex DNA stability. Our results clearly show that P-enantiomer stabilizes both poly(dG-dC)₂ and poly(dA-dT)₂ while M-enantiomer stabilizes poly(dA-dT)₂, however, destabilizes poly(dG-dC)₂. To our knowledge, this is the best example of chiral metal compounds with such contrasting preference on GC- and AT-DNA. Ligand selectively stabilizing or destabilizing DNA can interfere with protein–DNA interactions and potentially affect many crucial biological processes, such as DNA replication, transcription and repair. As such, bearing these unique capabilities, the chiral compounds reported here may shed light on the design of novel enantiomers targeting specific DNA with both sequence and conformation preference.

Enantiomeric self-recognition in homo- and heterodinuclear macrocyclic lanthanide(III) complexes

The controlled formation of lanthanide(III) dinuclear μ-hydroxo-bridged [Ln(2)L(2)(μ-OH)(2)X(2)](n+) complexes (where X = H(2)O, NO(3)(-), or Cl(-)) of the enantiopure chiral macrocycle L is reported. The (1)H and (13)C NMR resonances of these complexes have been assigned on the basis of COSY, NOESY, TOCSY, and HMQC spectra. The observed NOE connectivities confirm that the dimeric solid-state structure is retained in solution. The enantiomeric nature of the obtained chiral complexes and binding of hydroxide anions are reflected in their CD spectra. The formation of the dimeric complexes is accompanied by a complete enantiomeric self-recognition of the chiral macrocyclic units. The reaction of NaOH with a mixture of two different mononuclear lanthanide(III) complexes, [Ln(1)L](3+) and [Ln(2)L](3+), results in formation of the heterodinuclear [Ln(1)Ln(2)L(2)(μ-OH)(2)X(2)](n+) complexes as well as the corresponding homodinuclear complexes. The formation of the heterodinuclear complex is directly confirmed by the NOESY spectra of [EuLuL(2)(μ-OH)(2)(H(2)O)(2)](4+), which reveal close contacts between the macrocyclic unit containing the Eu(III) ion and the macrocyclic unit containing the Lu(III) ion. While the relative amounts of homo- and heterodinuclear complexes are statistical for the two lanthanide(III) ions of similar radii, a clear preference for the formation of heterodinuclear species is observed when the two mononuclear complexes contain lanthanide(III) ions of markedly different sizes, e.g., La(III) and Yb(III). The formation of heterodinuclear complexes is accompanied by the self-sorting of the chiral macrocyclic units based on their chirality. The reactions of NaOH with a pair of homochiral or racemic mononuclear complexes, [Ln(1)L(RRRR)](3+)/[Ln(2)L(RRRR)](3+), [Ln(1)L(SSSS)](3+)/[Ln(2)L(SSSS)](3+), or [Ln(1)L(rac)](3+)/[Ln(2)L(rac)](3+), results in mixtures of homochiral, homodinuclear and homochiral, heterodinuclear complexes. On the contrary, no heterochiral, heterodinuclear complexes [Ln(1)L(RRRR)Ln(2)L(SSSS)(μ-OH)(2)X(2)](n+) are formed in the reactions of two different mononuclear complexes of opposite chirality.

Helical lanthanide(III) complexes with chiral nonaaza macrocycle

The chiral nonaazamacrocyclic amine L, which is a reduction product of the 3 + 3 Schiff base macrocycle, wraps around the lanthanide(III) ions to form enantiopure helical complexes. These Ce(III), Pr(III), Nd(III), Eu(III), Gd(III), Tb(III), Er(III), Yb(III) and Lu(III) complexes have been isolated in enantiopure form and have been characterized by spectroscopic methods. X-ray crystal structures of the Ln(III) complexes with L show that the thermodynamic product of the complexation of the RRRRRR-isomer of the macrocycle is the (M)-helical complex in the case of Ce(III), Pr(III), Nd(III) and Eu(III). In contrast, the (P)-helical complex is the thermodynamic product in the case of Yb(III) and Lu(III). The NMR and CD spectra show that the (M)-helicity for the kinetic complexation product of the RRRRRR-isomer of the macrocycle is preferred for all investigated lanthanide(III) ions, while the preferred helicity of the thermodynamic product is (M) for the early lanthanide(III) ions and (P) for the late lanthanide(III) ions. In the case of the late lanthanide(III) ions, a slow inversion of helicity between the kinetic (M)-helical product and the thermodynamic (P)-helical product is observed in solution. For Er(III), Yb(III) and Lu(III) both forms have been isolated in pure form and characterized by NMR and CD. The analysis of 2D NMR spectra of the Lu(III) complex reveals the NOE correlations that prove that the helical structure is retained in solution. The NMR spectra also reveal large isotopic effect on the 1H NMR shifts of paramagnetic Ln(III) complexes, related to NH/ND exchange. Photophysical measurements show that L(RRRRRR) appears to favor an efficient 3pipi*-to-Ln energy transfer process taking place for Eu(III) and Tb(III), but these Eu(III)- and Tb(III)-containing complexes with L(RRRRRR) lead to small luminescent quantum yields due to an incomplete intersystem crossing (isc) transfer, a weak efficiency of the luminescence sensitization by the ligand, and/or efficient nonradiative deactivation processes. Circularly polarized luminescence on the MeOH solutions of Eu(III) and Tb(III) complexes confirms the presence of stable chiral emitting species and the observation of almost perfect mirror-image CPL spectra for these compounds with both enantiomeric forms of L.

Lanthanide Complexes of the Chiral Hexaaza Macrocycle and Its meso-Type Isomer: Solvent-Controlled Helicity Inversion

Lanthanide(III) complexes of the enantiopure chiral hexaaza tetraamine macrocycle L, 2(R),7(R),18(R),23(R)-1,8,15,17,24,31-hexaazatricyclo[25.3.1.1.0.0]-dotriaconta-10,12,14,26,28,30-hexaene, as well as of its meso-type 2(R),7(R),18(S),23(S)-isomeric macrocycle L1, have been synthesized and characterized by spectroscopic methods. The 2D NMR spectra confirm the identity of these complexes and indicate C2 symmetry of the [LnL]3+ and Cs symmetry of the [LnL1]3+ complexes. The crystal structures of the [PrL(NO3)(H2O)2](NO3)2, [EuL(NO3)(H2O)2](NO3)2, [DyL(NO3)2]2[Dy(NO3)5] x 5CH3CN, [YbL(NO3)2]2[Yb(NO3)5] x 5CH3CN, [YbL(H2O)2](NO3)3 x H2O, and [EuL1(NO3)(H2O)2]0.52[EuL1(NO3)2]0.48(NO3)1.52 x 0.48H2O complexes have been determined by single-crystal X-ray diffraction. In all complexes, the lanthanide(III) ions are coordinated by six nitrogen atoms of the macrocycle L or L1, but for each type of complex, the conformation of the macrocycle and the axial ligation are different. The crystallographic, NMR, and CD data show that the [YbL]3+ complex exists in two stable forms. Both forms of the Yb(III) complex have been isolated, and their interconversion was studied in various solvents. The two forms of [YbL]3+ complex correspond to two diastereomers of ligand L, which differ in the sense of the helical twist and the configuration at the stereogenic amine nitrogen atoms. In one of the stereoisomers, the macrocycle L of (RRRR) configuration at the stereogenic cyclohexane carbon atoms adopts the (RSRS) configuration at the amine nitrogen atoms, while in the other stereoisomer, the macrocycle L of (RRRR) configuration at the stereogenic cyclohexane carbon atoms adopts the (SSSS) configuration at the amine nitrogen atoms. The (RRRR)(RSRS) isomer is quantitatively converting to the (RRRR)(SSSS) isomer in water solution, while the reverse process is observed for an acetonitrile solution, thus representing the rare case of helicity inversion controlled by the solvent.

Lanthanide complexes of chiral 3 + 3 macrocycles derived from (1R,2R)-1,2-diaminocyclohexane and 2,6-diformyl-4-methylphenol

The enantiopure amine macrocycle H(3)L, as well as the parent macrocyclic Schiff base H(3)L1, the 3 + 3 condensation product of (1R,2R)-1,2-diaminocyclohexane and 2,6-diformyl-4-methylphenol, are able to form mononuclear complexes with lanthanide(III) ions. The lanthanide(III) complexes of H(3)L have been studied in solution using NMR spectroscopy and electrospray mass spectrometry. The NMR spectra indicate the presence of complexes of low C(1) and C(2) symmetry. The (1)H and (13)C NMR signals of the Lu(III) complex obtained from H(3)L have been assigned on the basis of COSY, TOCSY, NOESY, ROESY and HMQC spectra. The NMR data reveal unsymmetrical binding of lanthanide(III) ion and the presence of a dynamic process corresponding to rotation of Lu(III) within the macrocycle. The [Ln(H(4)L)(NO(3))(2)](NO(3))(2)(Ln = Sm(III), Eu(III), Dy(III), Yb(III) and Lu(III)) complexes of the cationic ligand H(4)L(+) have been isolated in pure form. The X-ray analysis of the [Eu(H(4)L)(NO(3))(2)](NO(3))(2) complex confirms the coordination mode of the macrocycle determined on the basis of NMR results. In this complex the europium(III) ion is bound to three phenolate oxygen atoms and two amine nitrogen atoms of the monoprotonated macrocycle H(4)L(+), as well as to two axial bidendate nitrate anions. In the presence of a base, mononuclear La(III), Ce(III) and Pr(III) complexes of the deprotonated form of the ligand L(3-) can be obtained. When 2 equivalents of Pr(III) are used in this synthesis Na(3)[Pr(2)L(NO(3))(2)(OH)(2)](2)NO(3).5H(2)O is obtained. The NMR, ES MS and an X-ray crystal model of this complex show coordination of two Pr(III) ions by the macrocycle L. The X-ray crystal structure of the free macrocycle H(3)L1 has also been determined. In contrast to macrocyclic amine H(3)L, the Schiff base H(3)L1 adopts a cone-type conformation resembling calixarenes.

New 2+2, 3+3 and 4+4 macrocycles derived from 1,2-diaminocyclohexane and 2,6-diformylpyridine

Two new Schiff base macrocycles - a 4+4 condensation product and a meso-type 2+2 condensation product - were obtained in a reaction of trans-1,2-diaminocyclohexane and 2,6-diformylpyridine. Reduction of these compounds led to the corresponding 4+4 and 2+2 macrocyclic amines. The macrocycles were characterised by NMR spectroscopy and electrospray mass spectrometry. The symmetry and stereochemistry of these macrocycles, as well as of new 3+3 and 4+4 diastereomers identified in solution, has been established. X-Ray structures of the 2+2 and 4+4 Schiff base macrocycles confirm the configurations determined on the basis of spectroscopic investigations. The crystal structures reveal that the centres of the square-shaped 4+4 macrocycles form channels as a result of columnar stacking.

Axial Ligand Exchange in Chiral Macrocyclic Ytterbium(III) Complexes

We investigate the role of axial ligands on the near-IR-optical and paramagnetic NMR spectra of the complex [YbL](+3) where L is the stereodefined enantiopure chiral macrocycle (L = hexaazapentacyclo[25.3.1.1(12,24).0(4,9).0(19,24)]dotriaconta-1(31),2,10,12,14,16(32),17,25,27,29-decaene). The conformation in solution of the lanthanide complex is characterized by analyzing the pseudocontact 1H NMR shifts and is consistent with X-ray data of single crystal of analogue systems. The macrocycle is confined within a thin equatorial disk, leaving the cation open to at least two axial sites, on the opposite hemispheres. We recorded, assigned, and analyzed the 1H NMR spectra of several species upon changing the anion in solution, calculating the magnetic susceptibility anisotropy tensor for each. Near-IR circular dichroism is used to investigate the solution equilibria involving the competing ligands and to derive a spectroscopic series for Yb.

Pentaaza macrocyclic ytterbium(iii) complex and solvent controlled supramolecular self-assembly of its dimeric μ-η2:η2peroxo-bridged derivatives

The unprecedented template action of ytterbium ion in the synthesis of pentaaza macrocyclic Schiff bases is exemplified by isolation and definitive identification of the seven-coordinate pentagonal bipyramidal complex with the formula of [YbLCl(2)]ClO(4) (1), where L is 2,14-dimethyl-3,6,10,13,19-pentaazabicyclo[13.3.1]nonadeca-1(19),2,13,15,17-pentaene, providing the first example of crystallographically characterized pentaaza macrocyclic ytterbium complex. For the first time the spectrum of the (2)F(7/2) --> (2)F(5/2) transition has been obtained for a molecular complex of ytterbium with organic ligands in which all ligand-field components of the ground and excited state are well displayed at room temperature. This complex is capable of forming a dimeric peroxo Yb(2)(mu-eta(2):eta(2)-O(2))L(2)(4+) (2) derivative containing the biologically significant planar side-on doubly bidentate coordination mode of the peroxide. Inclusion of the appropriate solvent molecule into the crystal structure generates supramolecular architectures (2a-d) in which the solvent controlled self-assembly is observed. Spectral properties of these complexes were found to be very important and promising in the area of ytterbium physicochemistry.