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Type
Number of Years Citation(s) in RCA
1
Mittempergher L, de Ronde JJ, Nieuwland M, Kerkhoven RM, Simon I, Th. Rutgers EJ, Wessels LFA, Van't Veer LJ. Gene expression profiles from formalin fixed paraffin embedded breast cancer tissue are largely comparable to fresh frozen matched tissue. PLoS One 2011;6:e17163. [PMID: 21347257 PMCID: PMC3037966 DOI: 10.1371/journal.pone.0017163] [Citation(s) in RCA: 123] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2010] [Accepted: 01/22/2011] [Indexed: 02/03/2023]  Open
Research Support, Non-U.S. Gov't 14 123
2
de Ronde JJ, Lips EH, Mulder L, Vincent AD, Wesseling J, Nieuwland M, Kerkhoven R, Vrancken Peeters MJTFD, Sonke GS, Rodenhuis S, Wessels LFA. SERPINA6, BEX1, AGTR1, SLC26A3, and LAPTM4B are markers of resistance to neoadjuvant chemotherapy in HER2-negative breast cancer. Breast Cancer Res Treat 2012. [PMID: 23203637 DOI: 10.1007/s10549-012-2340-x] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Journal Article 13 46
3
de Ronde JJ, Rigaill G, Rottenberg S, Rodenhuis S, Wessels LFA. Identifying subgroup markers in heterogeneous populations. Nucleic Acids Res 2013;41:e200. [PMID: 24062158 PMCID: PMC3834840 DOI: 10.1093/nar/gkt845] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]  Open
Validation Study 12 22
4
de Ronde JJ, Klijn C, Velds A, Holstege H, Reinders MJ, Jonkers J, Wessels LF. KC-SMARTR: An R package for detection of statistically significant aberrations in multi-experiment aCGH data. BMC Res Notes 2010;3:298. [PMID: 21070656 PMCID: PMC2995794 DOI: 10.1186/1756-0500-3-298] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2010] [Accepted: 11/11/2010] [Indexed: 01/24/2023]  Open
Journal Article 15 21
5
Schouten PC, van Dyk E, Braaf LM, Mulder L, Lips EH, de Ronde JJ, Holtman L, Wesseling J, Hauptmann M, Wessels LFA, Linn SC, Nederlof PM. Platform comparisons for identification of breast cancers with a BRCA-like copy number profile. Breast Cancer Res Treat 2013;139:317-27. [PMID: 23670131 DOI: 10.1007/s10549-013-2558-2] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2013] [Accepted: 04/29/2013] [Indexed: 12/28/2022]
Research Support, Non-U.S. Gov't 12 19
6
Bruin SC, de Ronde JJ, Wiering B, Braaf LM, de Wilt JHW, Vincent AD, van Velthuysen MLF, Ruers TJ, Wessels LF, van’t Veer LJ. Selection of Patients for Hepatic Surgery of Colorectal Cancer Liver Metastasis Based on Genomic Aberrations. Ann Surg Oncol 2013;20 Suppl 3:S560-9. [DOI: 10.1245/s10434-013-2985-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2012] [Indexed: 02/03/2023]
12 9
7
Mittempergher L, de Ronde JJ, Nieuwland M, Kerkhoven RM, Simon I, Wessels LFA, Van ‘t Veer LJ. Abstract 4834: Microarray gene expression analysis on formalin-fixed, paraffin embedded material is feasible and the resulting profiles are comparable to profiles from fresh frozen matched material. Cancer Res 2011. [DOI: 10.1158/1538-7445.am2011-4834] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
14
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