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Gomes CN, Felice AG, Pereira GDN, Ceballos VAS, Soares SDC, Tonani L, Barião PHG, Kress MRVZ, Duque SDS, Balkey M, Allard MW, Falcão JP. Comparative genomics and virulence potential of Campylobacter coli strains isolated from different sources over 25 years in Brazil. BMC Microbiol 2024;24:512. [PMID: 39614143 DOI: 10.1186/s12866-024-03642-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2024] [Accepted: 11/07/2024] [Indexed: 12/01/2024]  Open
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Campos IC, Vilela FP, Saraiva MDMS, Junior AB, Falcão JP. Insights into the global genomic features of Salmonella enterica serovar Gallinarum biovars Gallinarum and Pullorum. J Appl Microbiol 2024;135:lxae217. [PMID: 39165105 DOI: 10.1093/jambio/lxae217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2024] [Revised: 07/02/2024] [Accepted: 08/19/2024] [Indexed: 08/22/2024]
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Vilela FP, Kakumoto AA, Gomes CN, Pólvora TLS, Nobre ÁVV, Lourenço AG, Motta ACF, Falcão JP. ST88 ceftazidime-resistant Stenotrophomonas maltophilia is present in the saliva and gingival crevicular fluid of patients with periodontitis and AIDS from São Paulo State, Brazil. Braz J Microbiol 2024;55:3031-3035. [PMID: 38809496 PMCID: PMC11405574 DOI: 10.1007/s42770-024-01395-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2024] [Accepted: 05/20/2024] [Indexed: 05/30/2024]  Open
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Hasegawa LA, Vilela FP, Falcão JP. Antimicrobial resistance, virulence potential and genomic epidemiology of global genomes of the rare Salmonella enterica serovar Orion. Zoonoses Public Health 2024;71:591-599. [PMID: 38702905 DOI: 10.1111/zph.13140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2023] [Revised: 04/06/2024] [Accepted: 04/24/2024] [Indexed: 05/06/2024]
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Vilela FP, Imori PFM, Allard MW, Falcão JP. Insights into the genomic traits of Yersinia frederiksenii, Yersinia intermedia and Yersinia kristensenii isolated from diverse sources in Brazil. Antonie Van Leeuwenhoek 2024;117:86. [PMID: 38829455 DOI: 10.1007/s10482-024-01984-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2023] [Accepted: 05/22/2024] [Indexed: 06/05/2024]
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Gomes CN, Frazão MR, Seribelli AA, Barker DOR, Che EV, Nogueira MCL, Taboada EN, Falcão JP. Insights on the genomic diversity, virulence and resistance profile of a Campylobacter jejuni strain isolated from a hospitalized patient in Brazil. Braz J Microbiol 2024;55:1381-1391. [PMID: 38546951 PMCID: PMC11153483 DOI: 10.1007/s42770-024-01314-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Accepted: 03/21/2024] [Indexed: 06/07/2024]  Open
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Vilela FP, Rodrigues DDP, Allard MW, Falcão JP. CRISPR and CRISPR-MVLST reveal conserved spacer distribution and high similarity among Salmonella enterica serovar Infantis genomes from Brazil and other countries. Mol Genet Genomics 2024;299:61. [PMID: 38806731 DOI: 10.1007/s00438-024-02147-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Accepted: 04/24/2024] [Indexed: 05/30/2024]
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Pereira GDN, Seribelli AA, Campioni F, Gomes CN, Tiba-Casas MR, Medeiros MIC, Rodrigues DDP, Falcão JP. High levels of multidrug-resistant isolates of genetically similar Salmonella 1,4, [5],12:I:- from Brazil between 1983 and 2020. J Med Microbiol 2024;73. [PMID: 38375878 DOI: 10.1099/jmm.0.001792] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/21/2024]  Open
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Martins IM, Seribelli AA, Machado Ribeiro TR, da Silva P, Lustri BC, Hernandes RT, Falcão JP, Moreira CG. Invasive non-typhoidal Salmonella (iNTS) aminoglycoside-resistant ST313 isolates feature unique pathogenic mechanisms to reach the bloodstream. INFECTION, GENETICS AND EVOLUTION : JOURNAL OF MOLECULAR EPIDEMIOLOGY AND EVOLUTIONARY GENETICS IN INFECTIOUS DISEASES 2023;116:105519. [PMID: 37890808 DOI: 10.1016/j.meegid.2023.105519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Revised: 10/19/2023] [Accepted: 10/24/2023] [Indexed: 10/29/2023]
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Pereira GDN, Seribelli AA, Gomes CN, Vilela FP, Tonani L, Tiba-Casas MR, Medeiros MIC, Rodrigues DDP, Kress MRVZ, Falcão JP. Virulence potential of Salmonella 1,4, [5],12:i:- strains isolated during decades from different sources in the Southeast region of Brazil. Braz J Microbiol 2023;54:2827-2843. [PMID: 37817050 PMCID: PMC10689702 DOI: 10.1007/s42770-023-01145-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Accepted: 09/30/2023] [Indexed: 10/12/2023]  Open
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Vilela FP, Rodrigues DDP, Allard MW, Falcão JP. The rare Salmonella enterica serovar Isangi: genomic characterization of the antimicrobial resistance, virulence potential and epidemiology of Brazilian strains in comparison to global isolates. J Med Microbiol 2023;72. [PMID: 37462464 DOI: 10.1099/jmm.0.001736] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/21/2023]  Open
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Gomes CN, Duque SDS, Balkey M, Allard MW, Falcão JP. Draft Genome Sequences of 17 Campylobacter coli Strains Isolated from Animal and Food Sources in Brazil. Microbiol Resour Announc 2023:e0031223. [PMID: 37306576 DOI: 10.1128/mra.00312-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]  Open
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Gomes CN, Campioni F, Barker DOR, Che EV, Duque SDS, Taboada EN, Falcão JP. Antimicrobial Resistance Genotypes and Phenotypes of Campylobacter coli Isolated from Different Sources over a 16 Year Period in Brazil. J Glob Antimicrob Resist 2023;33:109-113. [PMID: 36944410 DOI: 10.1016/j.jgar.2023.03.004] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Revised: 03/03/2023] [Accepted: 03/07/2023] [Indexed: 03/23/2023]  Open
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Vilela FP, Dos Prazeres Rodrigues D, Allard MW, Falcão JP. Genomic analyses of drug-resistant Salmonella enterica serovar Heidelberg strains isolated from meat and related sources between 2013 and 2017 in the south region of Brazil. Curr Genet 2023;69:141-152. [PMID: 36920496 DOI: 10.1007/s00294-023-01264-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2023] [Revised: 02/22/2023] [Accepted: 03/02/2023] [Indexed: 03/16/2023]
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Vilela FP, Rodrigues DDP, Ferreira JC, Darini ALDC, Allard MW, Falcão JP. Genomic characterization of Salmonella enterica serovar Choleraesuis from Brazil reveals a swine gallbladder isolate harboring colistin resistance gene mcr-1.1. Braz J Microbiol 2022;53:1799-1806. [PMID: 35984599 PMCID: PMC9679059 DOI: 10.1007/s42770-022-00812-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Accepted: 07/29/2022] [Indexed: 01/13/2023]  Open
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Vilela FP, Rodrigues DDP, Allard MW, Falcão JP. Prevalence of efflux pump and heavy metal tolerance encoding genes among Salmonella enterica serovar Infantis strains from diverse sources in Brazil. PLoS One 2022;17:e0277979. [PMID: 36413564 PMCID: PMC9681071 DOI: 10.1371/journal.pone.0277979] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2022] [Accepted: 11/08/2022] [Indexed: 11/23/2022]  Open
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Campioni F, Vilela FP, Cao G, Kastanis G, Dos Prazeres Rodrigues D, Costa RG, Tiba-Casas MR, Yin L, Allard M, Falcão JP. Whole genome sequencing analyses revealed that Salmonella enterica serovar Dublin strains from Brazil belonged to two predominant clades. Sci Rep 2022;12:10555. [PMID: 35732677 PMCID: PMC9217926 DOI: 10.1038/s41598-022-14492-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Accepted: 06/08/2022] [Indexed: 11/09/2022]  Open
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Vilela FP, Rodrigues DDP, Allard MW, Falcão JP. Genomic characterization and antimicrobial resistance profiles of Salmonella enterica serovar Infantis isolated from food, humans and veterinary-related sources in Brazil. J Appl Microbiol 2021;132:3327-3342. [PMID: 34958707 DOI: 10.1111/jam.15430] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Revised: 12/22/2021] [Accepted: 12/23/2021] [Indexed: 01/07/2023]
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Vilela FP, Falcão JP. Analysis of the antimicrobial resistance gene frequency in whole-genome sequenced Vibrio from Latin American countries. J Med Microbiol 2021;70. [PMID: 34586052 DOI: 10.1099/jmm.0.001428] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
20
Seribelli AA, Ribeiro TRM, da Silva P, Martins IM, Vilela FP, Medeiros MIC, Peronni KC, da Silva Junior WA, Moreira CG, Falcão JP. Salmonella Typhimurium ST313 isolated in Brazil revealed to be more invasive and inflammatory in murine colon compared to ST19 strains. J Microbiol 2021;59:861-870. [PMID: 34382146 DOI: 10.1007/s12275-021-1082-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2021] [Revised: 05/12/2021] [Accepted: 07/06/2021] [Indexed: 11/25/2022]
21
Gomes CN, Barker DOR, Duque SDS, Che EV, Jayamanna V, Taboada EN, Falcão JP. Campylobacter coli isolated in Brazil typed by core genome Multilocus Sequence Typing shows high genomic diversity in a global context. INFECTION GENETICS AND EVOLUTION 2021;95:105018. [PMID: 34332158 DOI: 10.1016/j.meegid.2021.105018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Revised: 07/21/2021] [Accepted: 07/25/2021] [Indexed: 11/29/2022]
22
Seribelli AA, da Silva P, Frazão MR, Kich JD, Allard MW, Falcão JP. Phylogenetic relationship and genomic characterization of Salmonella Typhimurium strains isolated from swine in Brazil. INFECTION GENETICS AND EVOLUTION 2021;93:104977. [PMID: 34174480 DOI: 10.1016/j.meegid.2021.104977] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2020] [Revised: 05/29/2021] [Accepted: 06/21/2021] [Indexed: 02/07/2023]
23
Canela HMS, Cardoso B, Frazão MR, Falcão JP, Vitali LH, Martinez R, da Silva Ferreira ME. Genetic diversity assessed using PFGE, MLP and MLST in Candida spp. candidemia isolates obtained from a Brazilian hospital. Braz J Microbiol 2021;52:503-516. [PMID: 33611738 PMCID: PMC8105495 DOI: 10.1007/s42770-021-00446-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Accepted: 02/02/2021] [Indexed: 01/12/2023]  Open
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Seribelli AA, da Silva P, da Cruz MF, de Almeida F, Frazão MR, Medeiros MIC, Rodrigues DDP, Kich JD, de Jesus Benevides L, Soares SDC, Allard MW, Falcão JP. Insights about the epidemiology of Salmonella Typhimurium isolates from different sources in Brazil using comparative genomics. Gut Pathog 2021;13:27. [PMID: 33910644 PMCID: PMC8082823 DOI: 10.1186/s13099-021-00423-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/10/2021] [Accepted: 04/16/2021] [Indexed: 11/10/2022]  Open
25
Campioni F, Gomes CN, Bergamini AMM, Rodrigues DP, Tiba-Casas MR, Falcão JP. Comparison of cell invasion, macrophage survival and inflammatory cytokines profiles between Salmonella enterica serovars Enteritidis and Dublin from Brazil. J Appl Microbiol 2020;130:2123-2131. [PMID: 33150646 DOI: 10.1111/jam.14924] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Revised: 09/28/2020] [Accepted: 10/31/2020] [Indexed: 01/03/2023]
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