Force dependence of energy barriers in atomic friction and single-molecule force spectroscopy: critique of a critical scaling relation

Friction force microscopy and single-molecule force spectroscopy are experimental methods to explore multistable energy landscapes by means of a controlled reduction of the energy barriers between adjacent potential minima. This affects the system's interstate transition rates proportional to e(-ΔE(f)/kBT), with ΔE(f) being the barrier height, k(B)T the thermal energy, and f the elastic force applied. It is often assumed that, at large forces, the barrier height scales as (f(c) - f)(3/2), where f(c) is the critical force, at which the barrier vanishes. We show that, for the elastic forces produced by a pulling device of finite stiffness κ, this scaling relation is actually incorrect. Rather, the barrier is a double-valued function of force of the form E(f) ∝ (κ/κ(c) ±√1 − f/f(0))(3), where f(0) is the maximal force that the system potential can generate, and the characteristic stiffness κ(c) is not necessarily much larger than κ. In particular, for finite κ, the barrier vanishes at a certain force f(κ) < f(0), but, in view of the double-valuedness of ΔE(f), the maximal force f0 can still be reached. We derive the relation between the most probable force at the moment of transition, fm, and the pulling velocity, v. The usually assumed scaling f(m) ∝ (ln v)(2/3) is recovered as the κ → 0 limit of our more general result, but becomes increasingly worse as κ grows. We introduce a new data analysis method that allows one to quantitatively characterize the system potential and evaluate the stiffness of the pulling device, κ, which is usually not known beforehand. We demonstrate the feasibility of our method by analyzing the results of a numerical experiment based on the standard Prandtl-Tomlinson model of nanoscale friction.

Theoretical analysis of single-molecule force spectroscopy experiments: heterogeneity of chemical bonds

We show that the standard theoretical framework in single-molecule force spectroscopy has to be extended to consistently describe the experimental findings. The basic amendment is to take into account heterogeneity of the chemical bonds via random variations of the force-dependent dissociation rates. This results in a very good agreement between theory and rupture data from several different experiments.

Theoretical analysis of dynamic force spectroscopy experiments on ligand–receptor complexes

The forced rupture of single chemical bonds in biomolecular compounds (e.g. ligand-receptor systems) as observed in dynamic force spectroscopy experiments is addressed. Under the assumption that the probability of bond rupture depends only on the instantaneously acting force, a data collapse onto a single master curve is predicted. For rupture data obtained experimentally by dynamic AFM force spectroscopy of a ligand-receptor bond between a DNA and a regulatory protein we do not find such a collapse. We conclude that the above mentioned, generally accepted assumption is not satisfied and we discuss possible explanations.

Dissipative enhancement of the response of a bistable noisy oscillator to external driving

A study of the linear response susceptibility of a noisy bistable oscillator as a function of damping is carried out using the method of moments. It is found that this dependence, counterintuitively, has a nonmonotonic character and shows a maximum when the driving frequency is comparable to the thermal interwell hopping rate. The possible mechanism responsible for the occurrence of such dissipative sensitivity enhancement is proposed.