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Otero A, Fernández-Baeza J, Tejeda J, Antiñolo A, Carrillo-Hermosilla F, Díez-Barra E, Lara-Sánchez A, Fernández-López M, Lanfranchi M, Pellinghelli MA. Syntheses and crystal structures of lithium and niobium complexes containing a new type of monoanionic “scorpionate” ligand †. ACTA ACUST UNITED AC 1999. [DOI: 10.1039/a907505d] [Citation(s) in RCA: 104] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Otero A, Fernández-Baeza J, Antiñolo A, Carrillo-Hermosilla F, Tejeda J, Lara-Sánchez A, Sánchez-Barba L, Fernández-López M, Rodríguez AM, López-Solera I. Preparation of new monoanionic "scorpionate" ligands: synthesis and structural characterization of titanium(IV) complexes bearing this class of ligand. Inorg Chem 2002; 41:5193-202. [PMID: 12354053 DOI: 10.1021/ic020319f] [Citation(s) in RCA: 69] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The preparation of new "scorpionate" ligands in the form of the lithium derivatives [(Li(bdmpzdta)(H(2)O))(4)] (1) [bdmpzdta = bis(3,5-dimethylpyrazol-1-yl)dithioacetate], [Li(bdphpza)(H(2)O)(THF)] (2) [bdphpza = bis(3,5-diphenylpyrazol-1-yl)acetate], and [Li(bdphpzdta)(H(2)O)(THF)] (3) [bdphpzdta = bis(3,5-diphenylpyrazol-1-yl)dithioacetate] has been carried out. Furthermore, a series of titanium complexes has been prepared by reaction of TiCl(4)(THF)(2) with the lithium reagents [(Li(bdmpza)(H(2)O))(4)] (4) [bdmpza = bis(3,5-dimethylpyrazol-1-yl)acetate] and 1. Under the appropriate experimental conditions neutral complexes, namely [TiCl(3)(kappa(3)-bdmpza)] (5), [TiCl(3)(kappa(3)-bdmpzdta)] (6), and [TiCl(2)(kappa(2)-bdmpzdta)(2)] (7), and cationic complexes, namely [TiCl(2)(THF)(kappa(3)-bdmpza)]Cl (8) and [TiCl(2)(THF)(kappa(3)-bdmpzdta)]Cl (9), were isolated. Complexes 8 and 9 undergo an interesting nucleophilic THF ring-opening reaction to give the corresponding alkoxide-containing species [TiCl(2)(kappa(3)-bdmpza)(O(CH(2))(4)Cl)] (10) and [TiCl(2)(kappa(3)-bdmpzdta)(O(CH(2))(4)Cl)] (11). A family of alkoxide-containing complexes of general formulas [TiCl(2)(kappa(3)-bdmpza)(OR)] [R = Me (12); R = Et (14); R = (i)Pr (16); R = (t)Bu (18)] and [TiCl(2)(kappa(3)-bdmpzdta)(OR)] [R = Me (13); R = Et (15); R = (i)Pr (17)] was also prepared. The structures of these complexes have been determined by spectroscopic methods, and in addition, the X-ray crystal structures of 3, 7, 10, and 11 were also established.
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Mercado-Blanco J, García F, Fernández-López M, Olivares J. Melanin production by Rhizobium meliloti GR4 is linked to nonsymbiotic plasmid pRmeGR4b: cloning, sequencing, and expression of the tyrosinase gene mepA. J Bacteriol 1993; 175:5403-10. [PMID: 8366027 PMCID: PMC206595 DOI: 10.1128/jb.175.17.5403-5410.1993] [Citation(s) in RCA: 57] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023] Open
Abstract
Melanin production by Rhizobium meliloti GR4 is linked to nonsymbiotic plasmid pRmeGR4b (140 MDa). Transfer of this plasmid to GR4-cured derivatives or to Agrobacterium tumefaciens enables these bacteria to produce melanin. Sequence analysis of a 3.5-kb PstI fragment of plasmid pRmeGR4b has revealed the presence of a open reading frame 1,481-bp that codes for a protein whose sequence shows strong homology to two conserved regions involved in copper binding in tyrosinases and hemocyanins. In vitro-coupled transcription-translation experiments showed that this open reading frame codes for a 55-kDa polypeptide. Melanin production in GR4 is not under the control of the RpoN-NifA regulatory system, unlike that in R. leguminosarum bv. phaseoli 8002. The GR4 tyrosinase gene could be expressed in Escherichia coli under the control of the lacZ promoter. For avoiding confusion with mel genes (for melibiose), a change of the name of the previously reported mel genes of R. leguminosarum bv. phaseoli and other organisms to mep genes (for melanin production) is proposed.
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Otero A, Fernández-Baeza J, Tejeda J, Antiñolo A, Carrillo-Hermosilla F, Díez-Barra E, Lara-Sánchez A, Fernández-López M. A new type of monoanionic “scorpionate” ligand. Synthesis, spectroscopic characterisation and dynamic behaviour of some niobium(III) complexes. ACTA ACUST UNITED AC 2000. [DOI: 10.1039/b002742l] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Mergaert P, D'Haeze W, Fernández-López M, Geelen D, Goethals K, Promé JC, Van Montagu M, Holsters M. Fucosylation and arabinosylation of Nod factors in Azorhizobium caulinodans: involvement of nolK, nodZ as well as noeC and/or downstream genes. Mol Microbiol 1996; 21:409-19. [PMID: 8858594 DOI: 10.1046/j.1365-2958.1996.6451366.x] [Citation(s) in RCA: 54] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
The DNA region downstream of the nodABCSUIJ operon of Azorhizobium caulinodans was further characterized and two new genes, nodZ and noeC were identified in the same operon. The A. caulinodans wild-type strain produces a population of Nod factors that, at the reducing end, are either unmodified or carry a D-arabinosyl and/or an L-fucosyl branch. Nod factors produced by Tn5-insertion mutants in nodZ, noeC, and the separate nolK locus, were analysed by thin-layer chromatography and mass spectrometry. Fucosylation of Nod factors depended on both nodZ and nolK. Arabinosylation depended on noeC and/or downstream genes. Protein extracts of A. caulinodans contained an enzymatic activity for fucose transfer from GDP-fucose to chitooligosaccharides and to Nod factors. By mutant analysis and expression of nodZ in Escherichia coli, the fucosyltransferase activity was ascribed to the protein encoded by nodZ. In addition, a Nod factor fucosyltransferase activity, independent of nodZ or other known nod genes, was detected in A. caulinodans. Finally, on the basis of sequence similarity of the nolK gene product, and mass spectrometric analysis of Nod factors produced by a nolK mutant, we propose that this gene is involved in the synthesis of GDP-fucose.
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Otero A, Fernández-Baeza J, Antiñolo A, Tejeda J, Lara-Sánchez A, Sánchez-Barba L, Fernández-López M, López-Solera I. New Complexes of Zirconium(IV) and Hafnium(IV) with Heteroscorpionate Ligands and the Hydrolysis of Such Complexes To Give a Zirconium Cluster. Inorg Chem 2004; 43:1350-8. [PMID: 14966970 DOI: 10.1021/ic035067c] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A series of zirconium and hafnium heteroscorpionate complexes have been prepared by the reaction of MCl4 (M = Zr, Hf) with the compounds [[Li(bdmpza)(H2O)](4)] [bdmpza = bis(3,5-dimethylpyrazol-1-yl)acetate], [[Li(bdmpzdta)(H2O)](4)] [bdmpzdta = bis(3,5-dimethylpyrazol-1-yl)dithioacetate], and (Hbdmpze) [bdmpze = 2,2-bis(3,5-dimethylpyrazol-1-yl)ethoxide] (the latter with the prior addition of Bu(n)Li). Under the appropriate experimental conditions, mononuclear complexes, namely, [MCl3(kappa3-bdmpzx)] [x = a, M = Zr (1), Hf (2); x = dta, M = Zr (3), Hf (4); x = e, M = Zr (5), Hf (6)], and dinuclear complexes, namely, [[MCl2(mu-OH)(kappa3-bdmpzx)]2] [x = a, M = Zr (7), Hf (8); x = dta, M = Zr (9); x = e, M = Zr (10)], were isolated. A family of alkoxide-containing complexes of the general formula [ZrCl2(kappa3-bdmpzx)(OR)] [x = a, R = Me (11), Et (12), iPr (13), tBu (14); x = dta, R = Me (15), Et (16), iPr (17), tBu (18); x = e, R = Me (19), Et (20), (i)Pr (21), (t)Bu (22)] was also prepared. Complexes 11-14 underwent an interesting hydrolysis process to give the cluster complex [Zr6(mu3-OH)8(OH)8(kappa2-bdmpza)8] (23). The structures of these complexes have been determined by spectroscopic methods, and the X-ray crystal structures of 7, 8, and 23 were also established.
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Fernández-López M, D'Haeze W, Mergaert P, Verplancke C, Promé JC, Van Montagu M, Holsters M. Role of nodl and nodJ in lipo-chitooligosaccharide secretion in Azorhizobium caulinodans and Escherichia coli. Mol Microbiol 1996; 20:993-1000. [PMID: 8809752 DOI: 10.1111/j.1365-2958.1996.tb02540.x] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
Lipo-chitooligosaccharide (LCO) Nod factors are produced and secreted by rhizobia and trigger nodule development in leguminous host plants. The products of the bacterial nodlJ genes are related to transporters of capsular polysaccharides and were proposed to be involved in LCO transport. We have studied nodlJ of Azorhizobium caulinodans ORS571 by analysis of cell-associated and secreted radioactively labelled Nod factors in wild-type ORS571, a nodJ mutant and a complemented strain. Secretion was strongly reduced in the nodJ mutant, and restored to wild-type levels after complementation. Constructs were made for expression of combinations of different nod genes in Escherichia coli DH5 alpha. The strain DH5 alpha (pUCNABCSU) synthesized LCOs, but they were only secreted when a plasmid containing both nodl and nodJ was supplied in trans. nodl or nodJ alone was not sufficient. In E. coli as well as in Azorhizobium, the nodlJ-encoded transporter showed a specificity for more hydrophilic LCOs.
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Rodríguez-Caballero G, Caravaca F, Fernández-González AJ, Alguacil MM, Fernández-López M, Roldán A. Arbuscular mycorrhizal fungi inoculation mediated changes in rhizosphere bacterial community structure while promoting revegetation in a semiarid ecosystem. THE SCIENCE OF THE TOTAL ENVIRONMENT 2017; 584-585:838-848. [PMID: 28131451 DOI: 10.1016/j.scitotenv.2017.01.128] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2016] [Revised: 01/18/2017] [Accepted: 01/19/2017] [Indexed: 06/06/2023]
Abstract
The main goal of this study was to assess the effect of the inoculation of four autochthonous shrub species with the arbuscular mycorrhizal (AM) fungus Rhizophagus intraradices on the rhizosphere bacterial community and to ascertain whether such an effect is dependent on the host plant species. Additionally, analysis of rhizosphere soil chemical and biochemical properties was performed to find relationships between them and the rhizosphere bacterial communities. Non-metric multidimensional scaling analysis and subsequent permutational multivariate analysis of variance revealed differences in bacterial community composition and structure between non-inoculated and inoculated rhizospheres. Moreover, an influence of the plant species was observed. Different bacterial groups were found to be indicator taxonomic groups of non-inoculated and inoculated rhizospheres, Gemmatimonadetes and Anaerolineaceae, respectively, being the most notable indicators. As shown by distance based redundancy analysis, the shifts in bacterial community composition and structure mediated by the inoculation with the AM fungus were mainly related to changes in plant nutrients and growth parameters, such as the shoot phosphorus content. Our findings suggest that the AM fungal inoculum was able to modify the rhizosphere bacterial community assemblage while improving the host plant performance.
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Toro N, Martínez-Abarca F, Fernández-López M, Muñoz-Adelantado E. Diversity of group II introns in the genome of Sinorhizobium meliloti strain 1021: splicing and mobility of RmInt1. Mol Genet Genomics 2003; 268:628-36. [PMID: 12589437 DOI: 10.1007/s00438-002-0778-y] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2002] [Accepted: 10/25/2002] [Indexed: 10/25/2022]
Abstract
The number and diversity of known group II introns in eubacteria are continually increasing with the addition of new data from sequencing projects, but the significance of these introns in the evolution of bacterial genomes is unknown. We analyzed the main features of the group II introns present in the genome of the soil microorganism Sinorhizobium meliloti (strain 1021), the nitrogen-fixing symbiont of alfalfa, the DNA sequence of which was recently determined. Strain 1021 harbors three different classes of group II introns: RmInt1, of bacterial class D; SMb2147/SMb21167, which cluster within bacterial class C; and SMa1875, the phylogenetic class of which is uncertain. The group II introns SMb2147/SMb21167 and SMa1875 are widely distributed in S. meliloti, but are present in lower copy numbers than RmInt1. Strain 1021 harbors three copies of RmInt1, which is pSym-specific. Although RmInt1 is spliced in strain 1021, mobility assays suggested that, in contrast to other S. meliloti strains, the genetic background of strain 1021 does not support intron homing events.
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Villaverde-de-Sáa E, Fernández-López M, Rodil R, Quintana JB, Racamonde I, Cela R. Solid-phase extraction of perfluoroalkylated compounds from sea water. J Sep Sci 2015; 38:1942-50. [DOI: 10.1002/jssc.201401453] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2014] [Revised: 03/05/2015] [Accepted: 03/08/2015] [Indexed: 11/05/2022]
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Villadas PJ, Fernández-López M, Ramírez-Saad H, Toro N. Rhizosphere-bacterial community in Eperua falcata (Caesalpiniaceae) a putative nitrogen-fixing tree from French Guiana rainforest. MICROBIAL ECOLOGY 2007; 53:317-27. [PMID: 17186143 DOI: 10.1007/s00248-006-9158-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2006] [Revised: 07/04/2006] [Accepted: 08/18/2006] [Indexed: 05/13/2023]
Abstract
The rainforest of French Guiana is still largely unaffected by human activity. Various pristine sites like the Paracou Research Station are devoted to study this tropical ecosystem. We used culture-independent techniques, like polymerase chain reaction-temperature gradient gel electrophoresis, and construction of clone libraries of partial 16S rRNA and nifH genes, to analyze the composition of the bacterial community in the rhizosphere of mature trees of Eperua falcata and Dicorynia guianensis, both species within the Caesalpiniaceae family. E. falcata is one of the more abundant pioneer tree species in this ecosystem and so far, no root nodules have ever been found. However, its nitrogen-fixing status is regarded as "uncertain", whereas D. guianensis is clearly considered a non-nitrogen-fixing plant. The rhizospheres of these mature trees contain specific bacterial communities, including several currently found uncultured microorganisms. In these communities, there are putative nitrogen-fixing bacteria specifically associated to each tree: D. guianensis harbors several Rhizobium spp. and E. falcata members of the genera Burkholderia and Bradyrhizobium. In addition, nifH sequences in the rhizosphere of the latter tree were very diverse. Retrieved sequences were related to bacteria belonging to the alpha-, beta-, and gamma-Proteobacteria in the E. falcata rhizoplane, whereas only two sequences related to gamma-Proteobacteria were found in D. guianensis. Differences in the bacterial communities and the abundance and diversity of nifH sequences in E. falcata rhizosphere suggest that this tree could obtain nitrogen through a nonnodulating bacterial interaction.
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Fernández-López M, Olivares J, Bedmar EJ. Purification and characterization of the membrane-bound nitrate reductase isoenzymes of Bradyrhizobium japonicum. FEBS Lett 1996; 392:1-5. [PMID: 8769303 DOI: 10.1016/0014-5793(96)00670-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
Two respiratory membrane-bound nitrate reductase (NR) isoenzymes, NRI and NRII, have been purified for the first time from one single microorganism. Triton X-100-solubilized NRs were purified by a three-step procedure of differential centrifugation, Q-Sepharose chromatography, and gel filtration on Sephacryl S-300. Both isoenzymes were purified to homogeneity by the criteria of NR activity staining in polyacrylamide gels run under non-denaturating conditions and coincident staining of the protein band by silver nitrate. NRI is composed of three subunits of 116 kDa, 68 kDa, and 56 kDa, whereas NRII is composed of four subunits of 116 kDa, 68 kDa, 59 kDa, and 56 kDa. The 116-kDa subunit of NRI and the 59-kDa subunit of NRII exhibited immunological cross-reactivity with the respiratory NR of Pseudomonas stutzeri strain ZoBell.
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Fonfría JP, Fernández-López M, Pardo JR, Agúndez M, Sánchez Contreras C, Velilla Prieto L, Cernicharo J, Santander-García M, Quintana-Lacaci G, Castro-Carrizo A, Curiel S. The Maser Emitting Structure and Time Variability of the SIS Lines J = 14 - 13 and 15 - 14 in IRC+10216. THE ASTROPHYSICAL JOURNAL 2018; 860:162. [PMID: 29977091 PMCID: PMC6029660 DOI: 10.3847/1538-4357/aac5e3] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
We present new high angular resolution interferometer observations of the υ = 0 J = 14 - 13 and 15 - 14 SiS lines towards IRC+10216, carried out with CARMA and ALMA. The maps, with angular resolutions of ≃ 0 ⋅ ″ 25 and 0 ⋅ ″ 55 , reveal (1) an extended, roughly uniform, and weak emission with a size of ≃ 0 ⋅ ″ 5 , (2) a component elongated approximately along the East-West direction peaking at ≃ 0 ⋅ ″ 13 and 0 ⋅ ″ 17 at both sides of the central star, and (3) two blue- and red-shifted compact components peaking around 0 ⋅ ″ 07 to the NW of the star. We have modeled the emission with a 3D radiation transfer code finding that the observations cannot be explained only by thermal emission. Several maser clumps and one arc-shaped maser feature arranged from 5 to 20R⋆ from the central star, in addition to a thin shell-like maser structure at ≃ 13R⋆ are required to explain the observations. This maser emitting set of structures accounts for 75% of the total emission while the other 25% is produced by thermally excited molecules. About 60% of the maser emission comes from the extended emission and the rest from the set of clumps and the arc. The analysis of a time monitoring of these and other SiS and 29SiS lines carried out with the IRAM 30 m telescope from 2015 to present suggests that the intensity of some spectral components of the maser emission strongly depends on the stellar pulsation while other components show a mild variability. This monitoring evidences a significant phase lag of ≃ 0.2 between the maser and NIR light-curves.
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Fernández-López M, Marcet A, Perea M. Can response congruency effects be obtained in masked priming lexical decision? J Exp Psychol Learn Mem Cogn 2018; 45:1683-1702. [PMID: 30359052 DOI: 10.1037/xlm0000666] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
In past decades, researchers have conducted a myriad of masked priming lexical decision experiments aimed at unveiling the early processes underlying lexical access. A relatively overlooked question is whether a masked unrelated wordlike/unwordlike prime influences the processing of the target stimuli. If participants apply to the primes the same instructions as to the targets, one would predict a response congruency effect (e.g., book-TRUE faster than fiok-TRUE). Critically, the Bayesian Reader model predicts that there should be no effects of response congruency in masked priming lexical decision, whereas interactive-activation models offer more flexible predictions. We conducted 3 masked priming lexical decision experiments with 4 unrelated priming conditions differing in lexical status and wordlikeness (high-frequency word, low-frequency word, orthographically legal pseudoword, consonant string). Experiment 1 used wordlike nonwords as foils, Experiment 2 used illegal nonwords as foils, and Experiment 3 used orthographically legal hermit nonwords as foils. When the foils were orthographically legal (Experiments 1 and 3; i.e., a standard lexical decision scenario), lexical decision responses were not affected by the lexical status or wordlikeness of the unrelated primes, as predicted by the Bayesian Reader model and the selective inhibition hypothesis in interactive-activation models. When the foils were illegal (Experiment 2), consonant-string primes produced the slowest responses for word targets and the fastest responses for nonword targets. The Bayesian Reader model can capture this pattern, assuming that participants in Experiment 2 were making an orthographic legality decision (i.e., anything legal must be a word) rather than a lexical decision. (PsycINFO Database Record (c) 2019 APA, all rights reserved).
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Fonfría JP, Cernicharo J, Richter MJ, Fernández-López M, Prieto LV, Lacy JH. The abundance of 28Si 32S, 29Si 32S, 28Si 34S, and 30Si 32S in the inner layers of the envelope of IRC+10216. MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY 2015; 453:439-449. [PMID: 26997679 PMCID: PMC4797415 DOI: 10.1093/mnras/stv1634] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
We present high spectral resolution mid-IR observations of SiS towards the C-rich AGB star IRC+10216 carried out with the Texas Echelon-cross-Echelle Spectrograph mounted on the NASA Infrared Telescope Facility. We have identified 204 ro-vibrational lines of 28Si32S, 26 of 29Si32S, 20 of 28Si34S, and 15 of 30Si32S in the frequency range 720 - 790 cm-1. These lines belong to bands v = 1 - 0, 2 - 1, 3 - 2, 4-3, and 5-4, and involve rotational levels with Jlow ≲ 90. About 30 per cent of these lines are unblended or weakly blended and can be partially or entirely fitted with a code developed to model the mid-IR emission of a spherically symmetric circumstellar envelope composed of expanding gas and dust. The observed lines trace the envelope at distances to the star ≲ 35R⋆(≃ 0″.7). The fits are compatible with an expansion velocity of 1+2.5(r/R⋆ -1) km s-1 between 1 and 5R⋆, 11 km s-1 between 5 and 20R⋆, and 14.5 km s-1 outwards. The derived abundance profile of 28Si32S with respect to H2 is 4.9 × 10-6 between the stellar photosphere and 5R⋆, decreasing linearly down to 1.6 × 10-6 at 20R⋆ and to 1.3 × 10-6 at 50R⋆. 28Si32S seems to be rotationally under LTE in the region of the envelope probed with our observations and vibrationally out of LTE in most of it. There is a red-shifted emission excess in the 28Si32S lines of band v = 1 - 0 that cannot be found in the lines of bands v = 2 - 1, 3 - 2, 4 - 3, and 5 - 4. This excess could be explained by an enhancement of the vibrational temperature around 20R⋆ behind the star. The derived isotopic ratios 28Si/29Si, and 32S/34S are 17 and 14, compatible with previous estimates.
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Fernández-López M, Marcet A, Perea M. Does orthographic processing emerge rapidly after learning a new script? Br J Psychol 2020; 112:52-91. [PMID: 32780425 DOI: 10.1111/bjop.12469] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2019] [Revised: 06/18/2020] [Indexed: 11/28/2022]
Abstract
Orthographic processing is characterized by location-invariant and location-specific processing (Grainger, 2018): (1) strings of letters are more vulnerable to transposition effects than the strings of symbols in same-different tasks (location-invariant processing); and (2) strings of letters, but not strings of symbols, show an initial position advantage in target-in-string identification tasks (location-specific processing). To examine the emergence of these two markers of orthographic processing, we conducted a same-different task and a target-in-string identification task with two unfamiliar scripts (pre-training experiments). Across six training sessions, participants learned to fluently read and write one of these scripts. The post-training experiments were parallel to the pre-training experiments. Results showed that the magnitude of the transposed-letter effect in the same-different task and the serial function in the target-in-string identification tasks were remarkably similar for the trained and untrained scripts. Thus, location-invariant and location-specific processing does not emerge rapidly after learning a new script; instead, they may require thorough experience with specific orthographic structures.
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Fernández-López M. Changes in the glycosylation pattern at the reducing end of azorhizobial Nod factors affect nodulation efficiency. FEMS Microbiol Lett 1998. [DOI: 10.1016/s0378-1097(97)00528-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
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Perea M, Labusch M, Fernández-López M, Marcet A, Gutierrez-Sigut E, Gómez P. One more trip to Barcetona: on the special status of visual similarity effects in city names. PSYCHOLOGICAL RESEARCH 2024; 88:271-283. [PMID: 37353613 PMCID: PMC10805876 DOI: 10.1007/s00426-023-01839-3] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Accepted: 05/21/2023] [Indexed: 06/25/2023]
Abstract
Previous research has shown that, unlike misspelled common words, misspelled brand names are sensitive to visual letter similarity effects (e.g., amazom is often recognized as a legitimate brand name, but not amazot). This pattern poses problems for those models that assume that word identification is exclusively based on abstract codes. Here, we investigated the role of visual letter similarity using another type of word often presented in a more homogenous format than common words: city names. We found a visual letter similarity effect for misspelled city names (e.g., Barcetona was often recognized as a word, but not Barcesona) for relatively short durations of the stimuli (200 ms; Experiment 2), but not when the stimuli were presented until response (Experiment 1). Notably, misspelled common words did not show a visual letter similarity effect for brief 200- and 150-ms durations (e.g., votume was not as often recognized as a word than vosume; Experiments 3-4). These findings provide further evidence that the consistency in the format of presentations may shape the representation of words in the mental lexicon, which may be more salient in scenarios where processing resources are limited (e.g., brief exposure presentations).
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Fernández-López M, Davis CJ, Perea M, Marcet A, Gómez P. Unveiling the boost in the sandwich priming technique. Q J Exp Psychol (Hove) 2021; 75:1382-1393. [PMID: 34625015 DOI: 10.1177/17470218211055097] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The masked priming technique (which compares #####-house-HOUSE vs. #####-fight-HOUSE) is the gold-standard tool to examine the initial moments of word processing. Lupker and Davis showed that adding a pre-prime identical to the target produced greater priming effects in the sandwich technique (which compares #####-HOUSE-house-HOUSE vs #####-HOUSE-fight-HOUSE). While there is consensus that the sandwich technique magnifies the size of priming effects relative to the standard procedure, the mechanisms underlying this boost are not well understood (i.e., does it reflect quantitative or qualitative changes?). To fully characterise the sandwich technique, we compared the sandwich and standard techniques by examining the response times (RTs) and their distributional features (delta plots; conditional-accuracy functions), comparing identity versus unrelated primes. The results showed that the locus of the boost in the sandwich technique was two-fold: faster responses in the identity condition (via a shift in the RT distributions) and slower responses in the unrelated condition. We discuss the theoretical and methodological implications of these findings.
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Perea M, Baciero A, Marcet A, Fernández-López M, Gómez P. Do Grading Gray Stimuli Help to Encode Letter Position? Vision (Basel) 2021; 5:12. [PMID: 33806403 PMCID: PMC8005957 DOI: 10.3390/vision5010012] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2020] [Revised: 02/04/2021] [Accepted: 03/01/2021] [Indexed: 11/16/2022] Open
Abstract
Numerous experiments in the past decades recurrently showed that a transposed-letter pseudoword (e.g., JUGDE) is much more wordlike than a replacement-letter control (e.g., JUPTE). Critically, there is an ongoing debate as to whether this effect arises at a perceptual level (e.g., perceptual uncertainty at assigning letter position of an array of visual objects) or at an abstract language-specific level (e.g., via a level of "open bigrams" between the letter and word levels). Here, we designed an experiment to test the limits of perceptual accounts of letter position coding. The stimuli in a lexical decision task were presented either with a homogeneous letter intensity or with a graded gray intensity, which indicated an unambiguous letter order. The pseudowords were either transposed-letter pseudowords or replaced-letter pseudowords (e.g., jugde vs. jupte). The results showed much longer response times and substantially more errors in the transposed-letter pseudowords than in the replacement-letter pseudowords, regardless of visual format. These findings favor the idea that language-specific orthographic element factors play an essential role when encoding letter position during word recognition.
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Marcet A, Fernández-López M, Labusch M, Perea M. The Omission of Accent Marks Does Not Hinder Word Recognition: Evidence From Spanish. Front Psychol 2021; 12:794923. [PMID: 34966338 PMCID: PMC8710576 DOI: 10.3389/fpsyg.2021.794923] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2021] [Accepted: 11/22/2021] [Indexed: 11/28/2022] Open
Abstract
Recent research has found that the omission of accent marks in Spanish does not produce slower word identification times in go/no-go lexical decision and semantic categorization tasks [e.g., cárcel (prison) = carcel], thus suggesting that vowels like á and a are represented by the same orthographic units during word recognition and reading. However, there is a discrepant finding with the yes/no lexical decision task, where the words with the omitted accent mark produced longer response times than the words with the accent mark. In Experiment 1, we examined this discrepant finding by running a yes/no lexical decision experiment comparing the effects for words and non-words. Results showed slower response times for the words with omitted accent mark than for those with the accent mark present (e.g., cárcel < carcel). Critically, we found the opposite pattern for non-words: response times were longer for the non-words with accent marks (e.g., cárdil > cardil), thus suggesting a bias toward a “word” response for accented items in the yes/no lexical decision task. To test this interpretation, Experiment 2 used the same stimuli with a blocked design (i.e., accent mark present vs. omitted in all items) and a go/no-go lexical decision task (i.e., respond only to “words”). Results showed similar response times to words regardless of whether the accent mark was omitted (e.g., cárcel = carcel). This pattern strongly suggests that the longer response times to words with an omitted accent mark in yes/no lexical decision experiments are a task-dependent effect rather than a genuine reading cost.
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Vergara-Martínez M, Fernández-López M, Perea M. Perceptual Contiguity Does Not Modulate Matched-Case Identity-Priming Effects in Lexical Decision. Brain Sci 2023; 13:brainsci13020336. [PMID: 36831879 PMCID: PMC9954145 DOI: 10.3390/brainsci13020336] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Revised: 01/28/2023] [Accepted: 02/13/2023] [Indexed: 02/18/2023] Open
Abstract
In recent studies with the masked priming lexical decision task, matched-case identity-priming effects occur for nonwords but not for words (e.g., nonwords: ERTAR-ERTAR faster than ertar-ERTAR; words: ALTAR-ALTAR produces similar response times as altar-ALTAR). This dissociation is thought to result from lexical feedback influencing orthographic representations in word processing. As nonwords do not receive this feedback, bottom-up processing of prime-target integration leads to matched-case effects. However, the underlying mechanism of this effect in nonwords remains unclear. In this study, we added a color congruency manipulation across the prime and target in the matched-case identity-priming design. We aimed to determine whether the case effects originate at the early stages of prime-target perceptual integration or due to bottom-up activation of case-specific letter detectors. Results replicated the previous dissociation between words and nonwords regarding the matched-case identity effect. Additionally, we did not find any modulation of these effects by prime-target color congruency. These findings suggest that the locus of the matched-case identity effect is at an orthographic level of representation that encodes case information.
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Fernández-López M, Mirault J, Grainger J, Perea M. How resilient is reading to letter rotations? A parafoveal preview investigation. J Exp Psychol Learn Mem Cogn 2021; 47:2029-2042. [PMID: 33856852 DOI: 10.1037/xlm0000999] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Skilled readers have developed a certain amount of tolerance to variations in the visual form of words (e.g., CAPTCHAs, handwritten text, etc.). To examine how visual distortion affects the mapping from the visual input onto abstract word representations during normal reading, we focused on a single type of distortion: letter rotation. Importantly, two leading neurally inspired models of word recognition (SERIOL model, Whitney, 2001; LCD model, Dehaene et al., 2005) make distinct predictions: Whereas the SERIOL model postulates that the cost of letter rotation increases gradually, the LCD model assumes an all-or-none boundary at around 40° to 45° rotation angle. To examine these predictions in a normal reading scenario, we conducted a parafoveal preview experiment using the gaze-contingent boundary change paradigm. The parafoveal previews were identical or unrelated to the target word. Critically, each preview's individual letters were rotated 15°, 30°, 45°, or 60°. Apart from the parafoveal previews, all text, including target words, was presented with letters in their canonical upright orientation. Results showed that the advantage of the identity preview condition in eye fixation times on the target word decreased progressively by rotation angle. This pattern of results favors the view that the cost of letter rotation during normal reading increases gradually as a function of the angle of rotation. (PsycInfo Database Record (c) 2021 APA, all rights reserved).
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Fernández-López M, Delgado MJ, Olivares J, Bedmar EJ. [Utilization of nitrate by bacteroids and cytosol of nodules formed by Rhizobium leguminosarum]. MICROBIOLOGIA (MADRID, SPAIN) 1989; 5:13-23. [PMID: 2803636] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Nitrite production by nodules and roots of pea plants (Pisum sativum L., cultivar Alaska) inoculated with Rhizobium leguminosarum strain 3855 has been studied. Nitrate reductase (NR) activity and nitrite reductase (NiR) activity of the bacteroidal and cytosolic fractions of the nodules were also determined, as well as the nitrite content of the nodules cytosol. Nitrite production by nodules and roots from plants treated with 5 mM KNO3 was higher than that of nodules and roots from plants not treated with nitrate, and regardless of the nitrate treatment, nitrite production increased with the incubation period. The presence of nitrate, propanol or both compounds in the incubation mixtures significantly increased the nitrite production by nodules and roots. Nitrite reductase activity was detected in fresh by isolated bacteroids of R. leguminosarum strain 3855, although the presence of nitrate reductase activity could not be detected both in bacteroids of nodules isolated from plants treated or not with 5 mM KNO3. After isolation, when bacteroids were incubated in a mixture with nitrate, nitrate reductase activity developed after incubation for 12 h. Consequently, there was an increase in nitrite reductase activity, which resulted in the disappearance of the nitrite previously accumulated in the incubation medium. Nitrate utilization by bacteroids was not detected until 5 h from the beginning of the incubation period. Since the presence of chloramphenicol or rifampicin in the incubation medium prevented the development of the nitrate reductase activity, such activity was induced in bacteroids. Nitrite content and nitrate reductase and nitrite reductase activities of the cytosol from nodules of pea plants treated or not with 5 mM KNO3 varied with the buffer used for nodules homogenization. However, no nitrite was found when nodules were homogenized with ethanol, what indicates that nitrite accumulation in the cytosol occurs during the homogenization process of the nodules.
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Rufo-Campos M, Fernández-López M, Castro E, Tello MP, Salazar N. [Follow-up of partial seizure progression in an infant]. Rev Neurol 1998; 26:735-8. [PMID: 9634656] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
UNLABELLED OBJECTIVE AND MATERIAL: We are carried out a retrospective study of 43 patients, 21 males and 22 women entered during the period of infancy in the Service of Neurology of our hospital and with diagnostic of any type of partial seizure, in an intent to correlate a series of clinical parameters, electroneurophysiologics and initial therapeutics with their factors follow-up periods. RESULTS They are a half age of 7.11 months (1-19), consecutive being controlled for a period of time of 40 months (6-96). We have settled down a relationship between the drugs utilized in the first seizure and that other that they remained in their last revision, the current state of the critical manifestations, and the existence or not of an agreement between the e diagnosis emitted to the discharge and the development of the illness. CONCLUSION After the present study, we thought that the current classification of the epileptic seizures is insufficient in the age of the infant, with presages much more complexes.
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