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Maes P, Alkhovsky SV, Bào Y, Beer M, Birkhead M, Briese T, Buchmeier MJ, Calisher CH, Charrel RN, Choi IR, Clegg CS, de la Torre JC, Delwart E, DeRisi JL, Di Bello PL, Di Serio F, Digiaro M, Dolja VV, Drosten C, Druciarek TZ, Du J, Ebihara H, Elbeaino T, Gergerich RC, Gillis AN, Gonzalez JPJ, Haenni AL, Hepojoki J, Hetzel U, Hồ T, Hóng N, Jain RK, Jansen van Vuren P, Jin Q, Jonson MG, Junglen S, Keller KE, Kemp A, Kipar A, Kondov NO, Koonin EV, Kormelink R, Korzyukov Y, Krupovic M, Lambert AJ, Laney AG, LeBreton M, Lukashevich IS, Marklewitz M, Markotter W, Martelli GP, Martin RR, Mielke-Ehret N, Mühlbach HP, Navarro B, Ng TFF, Nunes MRT, Palacios G, Pawęska JT, Peters CJ, Plyusnin A, Radoshitzky SR, Romanowski V, Salmenperä P, Salvato MS, Sanfaçon H, Sasaya T, Schmaljohn C, Schneider BS, Shirako Y, Siddell S, Sironen TA, Stenglein MD, Storm N, Sudini H, Tesh RB, Tzanetakis IE, Uppala M, Vapalahti O, Vasilakis N, Walker PJ, Wáng G, Wáng L, Wáng Y, Wèi T, Wiley MR, Wolf YI, Wolfe ND, Wú Z, Xú W, Yang L, Yāng Z, Yeh SD, Zhāng YZ, Zhèng Y, Zhou X, Zhū C, Zirkel F, Kuhn JH. Taxonomy of the family Arenaviridae and the order Bunyavirales: update 2018. Arch Virol 2018; 163:2295-2310. [PMID: 29680923 DOI: 10.1007/s00705-018-3843-5] [Citation(s) in RCA: 130] [Impact Index Per Article: 21.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2018] [Accepted: 04/02/2018] [Indexed: 10/17/2022]
Abstract
In 2018, the family Arenaviridae was expanded by inclusion of 1 new genus and 5 novel species. At the same time, the recently established order Bunyavirales was expanded by 3 species. This article presents the updated taxonomy of the family Arenaviridae and the order Bunyavirales as now accepted by the International Committee on Taxonomy of Viruses (ICTV) and summarizes additional taxonomic proposals that may affect the order in the near future.
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Affiliation(s)
- Piet Maes
- Zoonotic Infectious Diseases Unit, KU Leuven, Leuven, Belgium
| | - Sergey V Alkhovsky
- D. I. Ivanovsky Institute of Virology, N. F. Gamaleya Federal Research Center for Epidemiology and Microbiology, Ministry of Health of the Russian Federation, Moscow, Russia
| | - Yīmíng Bào
- Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China
| | - Martin Beer
- Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany
| | - Monica Birkhead
- Centre for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases, National Health Laboratory Service, Sandringham, South Africa
| | - Thomas Briese
- Department of Epidemiology, Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, New York, USA
| | - Michael J Buchmeier
- Department of Molecular Biology and Biochemistry, University of California, Irvine, CA, USA
| | - Charles H Calisher
- Arthropod-Borne and Infectious Diseases Laboratory, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, CO, USA
| | - Rémi N Charrel
- Unité des Virus Emergents, Aix-Marseille University, IRD 190, Inserm 1207, IHU Méditerranée Infection, Marseille, France
| | - Il Ryong Choi
- Plant Breeding Genetics and Biotechnology Division, International Rice Research Institute, Los Baños, Philippines
| | | | - Juan Carlos de la Torre
- Department of Immunology and Microbial Science, IMM-6, The Scripps Research Institute, La Jolla, CA, USA
| | - Eric Delwart
- Blood Systems Research Institute, San Francisco, CA, USA.,Department of Laboratory Medicine, University of California, San Francisco, San Francisco, CA, USA
| | - Joseph L DeRisi
- Departments of Medicine, Biochemistry and Biophysics, and Microbiology, University of California, San Francisco, CA, USA
| | - Patrick L Di Bello
- Division of Agriculture, Department of Plant Pathology, University of Arkansas System, Fayetteville, AR, USA
| | - Francesco Di Serio
- Istituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, Bari, Italy
| | | | - Valerian V Dolja
- Department of Botany and Plant Pathology, Center for Genome Research and Biocomputing, Oregon State University, Corvallis, OR, USA
| | - Christian Drosten
- Institute of Virology, Charité, Universitätsmedizin Berlin, Corporate Member of Free University Berlin, Berlin Institute of Health, Humboldt-University Berlin, Berlin, Germany.,Institute of Virology, University of Bonn Medical Centre, Bonn, Germany.,German Centre for Infection Research, Braunschweig, Germany
| | - Tobiasz Z Druciarek
- Division of Agriculture, Department of Plant Pathology, University of Arkansas System, Fayetteville, AR, USA
| | - Jiang Du
- Institute of Pathogen Biology, Chinese Academy of Medical Sciences, Beijing, China
| | - Hideki Ebihara
- Department of Molecular Medicine, Mayo Clinic, Rochester, MN, USA
| | | | - Rose C Gergerich
- Division of Agriculture, Department of Plant Pathology, University of Arkansas System, Fayetteville, AR, USA
| | | | - Jean-Paul J Gonzalez
- Center of Excellence for Emerging and Zoonotic Animal Disease, Kansas State University, Manhattan, KS, USA
| | - Anne-Lise Haenni
- Institut Jacques Monod, CNRS, Université Paris-Diderot, Paris, France
| | - Jussi Hepojoki
- Department of Virology, University of Helsinki, Medicum, Helsinki, Finland.,Vetsuisse Faculty, Institute of Veterinary Pathology, University of Zurich, Zurich, Switzerland
| | - Udo Hetzel
- Vetsuisse Faculty, Institute of Veterinary Pathology, University of Zurich, Zurich, Switzerland.,Department of Veterinary Biosciences, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland
| | - Thiện Hồ
- Division of Agriculture, Department of Plant Pathology, University of Arkansas System, Fayetteville, AR, USA
| | - Ní Hóng
- State Key Laboratory of Agromicrobiology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Rakesh K Jain
- Division of Plant Pathology, Indian Agricultural Research Institute, New Delhi, India
| | - Petrus Jansen van Vuren
- Centre for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases, National Health Laboratory Service, Sandringham, South Africa.,Department of Medical Virology, Faculty of Health Sciences, Centre for Viral Zoonoses, University of Pretoria, Pretoria, South Africa
| | - Qi Jin
- MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Peking Union Medical College, Chinese Academy of Medical Sciences, Beijing, China.,Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Beijing, China
| | - Miranda Gilda Jonson
- Department of Agricultural Biotechnology, Center for Fungal Pathogenesis, College of Agriculture and Life Sciences, Seoul National University, Seoul, Korea
| | - Sandra Junglen
- Institute of Virology, Charité, Universitätsmedizin Berlin, Corporate Member of Free University Berlin, Berlin Institute of Health, Humboldt-University Berlin, Berlin, Germany.,German Centre for Infection Research, Braunschweig, Germany
| | - Karen E Keller
- United States Department of Agriculture, Agricultural Research Service, Horticultural Crops Research Laboratory, Corvallis, OR, USA
| | - Alan Kemp
- Centre for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases, National Health Laboratory Service, Sandringham, South Africa
| | - Anja Kipar
- Vetsuisse Faculty, Institute of Veterinary Pathology, University of Zurich, Zurich, Switzerland.,Department of Veterinary Biosciences, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland
| | | | - Eugene V Koonin
- National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA
| | - Richard Kormelink
- Laboratory of Virology, Department of Plant Sciences, Wageningen University, Wageningen, The Netherlands
| | - Yegor Korzyukov
- Department of Virology, University of Helsinki, Medicum, Helsinki, Finland
| | - Mart Krupovic
- Department of Microbiology, Institut Pasteur, Paris, France
| | - Amy J Lambert
- Division of Vector-Borne Diseases, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Fort Collins, CO, USA
| | - Alma G Laney
- Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC, USA
| | | | - Igor S Lukashevich
- Department of Pharmacology and Toxicology, School of Medicine, Center for Predictive Medicine for Biodefense and Emerging Infectious Diseases, University of Louisville, Louisville, KY, USA
| | - Marco Marklewitz
- Institute of Virology, Charité, Universitätsmedizin Berlin, Corporate Member of Free University Berlin, Berlin Institute of Health, Humboldt-University Berlin, Berlin, Germany.,German Centre for Infection Research, Braunschweig, Germany
| | - Wanda Markotter
- Centre for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases, National Health Laboratory Service, Sandringham, South Africa.,Department of Medical Virology, Faculty of Health Sciences, Centre for Viral Zoonoses, University of Pretoria, Pretoria, South Africa
| | - Giovanni P Martelli
- Department of Plant, Soil and Food Sciences, University "Aldo Moro", Bari, Italy
| | - Robert R Martin
- United States Department of Agriculture, Agricultural Research Service, Horticultural Crops Research Laboratory, Corvallis, OR, USA
| | | | | | - Beatriz Navarro
- Istituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, Bari, Italy
| | - Terry Fei Fan Ng
- Department of Laboratory Medicine, University of California, San Francisco, San Francisco, CA, USA
| | - Márcio Roberto Teixeira Nunes
- Evandro Chagas Institute, Ministry of Health, Pará, Brazil.,Department of Pathology, Center for Biodefense and Emerging Infectious Diseases, University of Texas Medical Branch, Galveston, TX, USA
| | - Gustavo Palacios
- United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA
| | - Janusz T Pawęska
- Centre for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases, National Health Laboratory Service, Sandringham, South Africa.,Department of Medical Virology, Faculty of Health Sciences, Centre for Viral Zoonoses, University of Pretoria, Pretoria, South Africa
| | - Clarence J Peters
- Galveston National Laboratory, University of Texas Medical Branch, Galveston, TX, USA
| | - Alexander Plyusnin
- Department of Virology, University of Helsinki, Medicum, Helsinki, Finland
| | - Sheli R Radoshitzky
- United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA
| | - Víctor Romanowski
- Instituto de Biotecnología y Biología Molecular, Centro Cientifico Technológico-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas, Universidad Nacional de La Plata, La Plata, Argentina
| | - Pertteli Salmenperä
- Department of Virology, University of Helsinki, Medicum, Helsinki, Finland.,Blueprint Genetics, Helsinki, Finland
| | - Maria S Salvato
- Institute of Human Virology, University of Maryland School of Medicine, Baltimore, MD, USA
| | - Hélène Sanfaçon
- Summerland Research and Development Centre, Agriculture and Agri-Food Canada, Summerland, BC, Canada
| | - Takahide Sasaya
- Department of Planning and Coordination, National Agriculture and Food Research Organization, Tsukuba, Japan
| | - Connie Schmaljohn
- United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA
| | | | - Yukio Shirako
- Asian Center for Bioresources and Environmental Sciences, University of Tokyo, Tokyo, Japan
| | - Stuart Siddell
- School of Cellular and Molecular Medicine, University of Bristol, Bristol, UK
| | - Tarja A Sironen
- Department of Virology, University of Helsinki, Medicum, Helsinki, Finland
| | - Mark D Stenglein
- Department of Microbiology, Immunology and Pathology, Colorado State University, Fort Collins, CO, USA
| | - Nadia Storm
- Centre for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases, National Health Laboratory Service, Sandringham, South Africa
| | - Harikishan Sudini
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, Telangana, India
| | - Robert B Tesh
- Department of Pathology, Center for Biodefense and Emerging Infectious Diseases, University of Texas Medical Branch, Galveston, TX, USA
| | - Ioannis E Tzanetakis
- Division of Agriculture, Department of Plant Pathology, University of Arkansas System, Fayetteville, AR, USA
| | - Mangala Uppala
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, Telangana, India
| | - Olli Vapalahti
- Department of Virology, University of Helsinki, Medicum, Helsinki, Finland.,Department of Veterinary Biosciences, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland.,Department of Virology, Helsinki University Hospital, University of Helsinki, Helsinki, Finland
| | - Nikos Vasilakis
- Department of Pathology, Center for Biodefense and Emerging Infectious Diseases, University of Texas Medical Branch, Galveston, TX, USA
| | - Peter J Walker
- School of Biological Sciences, University of Queensland, St. Lucia, QLD, Australia
| | - Guópíng Wáng
- State Key Laboratory of Agromicrobiology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Lìpíng Wáng
- State Key Laboratory of Agromicrobiology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Yànxiăng Wáng
- State Key Laboratory of Agromicrobiology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Tàiyún Wèi
- Fujian Province Key Laboratory of Plant Virology, Institute of Plant Virology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China
| | - Michael R Wiley
- United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.,University of Nebraska Medical Center, Omaha, NE, USA
| | - Yuri I Wolf
- National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA
| | - Nathan D Wolfe
- Metabiota, San Francisco, CA, USA.,Global Viral, San Francisco, CA, USA
| | - Zhìqiáng Wú
- Institute of Pathogen Biology, Chinese Academy of Medical Sciences, Beijing, China
| | - Wénxìng Xú
- State Key Laboratory of Agromicrobiology, Huazhong Agricultural University, Wuhan, Hubei, China.,Horticultural Crop (Fruit Trees) Biology and Germplasm Creation, Ministry of Agriculture, Wuhan, Hubei, China.,Key Laboratory of Plant Pathology of Hubei Province, Wuhan, Hubei, China.,College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Li Yang
- State Key Laboratory for Molecular Virology and Genetic Engineering, Beijing, China
| | - Zuòkūn Yāng
- State Key Laboratory of Agromicrobiology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Shyi-Dong Yeh
- National Chung-Hsing University, Taichung City, Taiwan
| | - Yǒng-Zhèn Zhāng
- Department of Zoonoses, State Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Beijing, China
| | - Yàzhōu Zhèng
- State Key Laboratory of Agromicrobiology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Xueping Zhou
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Chénxī Zhū
- State Key Laboratory of Agromicrobiology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Florian Zirkel
- Institute of Virology, University of Bonn Medical Centre, Bonn, Germany
| | - Jens H Kuhn
- Division of Clinical Research (DCR), Integrated Research Facility at Fort Detrick (IRF-Frederick), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), B-8200 Research Plaza, Fort Detrick, Frederick, MD, 21702, USA.
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