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1
Fransson S, Strand R, Tilly D. Deep learning-based dose prediction for magnetic resonance-guided prostate radiotherapy. Med Phys 2024;51:8087-8095. [PMID: 39106418 DOI: 10.1002/mp.17312] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 07/05/2024] [Accepted: 07/08/2024] [Indexed: 08/09/2024]  Open
2
Karlsson P, Strand R, Kullberg J, Michaëlsson K, Ahlström H, Lind L, Malinovschi A. A detailed analysis of body composition in relation to cardiopulmonary exercise test indices. Sci Rep 2024;14:21633. [PMID: 39285239 PMCID: PMC11405762 DOI: 10.1038/s41598-024-72973-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2024] [Accepted: 09/12/2024] [Indexed: 09/22/2024]  Open
3
Fryk E, Rodrigues Silva VR, Strindberg L, Strand R, Ahlström H, Michaëlsson K, Kullberg J, Lind L, Jansson PA. Metabolic profiling of galectin-1 and galectin-3: a cross-sectional, multi-omics, association study. Int J Obes (Lond) 2024;48:1180-1189. [PMID: 38777863 PMCID: PMC11281902 DOI: 10.1038/s41366-024-01543-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Revised: 05/08/2024] [Accepted: 05/10/2024] [Indexed: 05/25/2024]
4
Bengtsson Bernander K, Sintorn IM, Strand R, Nyström I. Classification of rotation-invariant biomedical images using equivariant neural networks. Sci Rep 2024;14:14995. [PMID: 38951630 PMCID: PMC11217465 DOI: 10.1038/s41598-024-65597-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Accepted: 06/21/2024] [Indexed: 07/03/2024]  Open
5
Banerjee S, Nysjö F, Toumpanakis D, Dhara AK, Wikström J, Strand R. Streamlining neuroradiology workflow with AI for improved cerebrovascular structure monitoring. Sci Rep 2024;14:9245. [PMID: 38649692 PMCID: PMC11035663 DOI: 10.1038/s41598-024-59529-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Accepted: 04/11/2024] [Indexed: 04/25/2024]  Open
6
Ahmad N, Dahlberg H, Jönsson H, Tarai S, Guggilla RK, Strand R, Lundström E, Bergström G, Ahlström H, Kullberg J. Voxel-wise body composition analysis using image registration of a three-slice CT imaging protocol: methodology and proof-of-concept studies. Biomed Eng Online 2024;23:42. [PMID: 38614974 PMCID: PMC11015680 DOI: 10.1186/s12938-024-01235-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Accepted: 04/02/2024] [Indexed: 04/15/2024]  Open
7
Tarai S, Lundström E, Sjöholm T, Jönsson H, Korenyushkin A, Ahmad N, Pedersen MA, Molin D, Enblad G, Strand R, Ahlström H, Kullberg J. Improved automated tumor segmentation in whole-body 3D scans using multi-directional 2D projection-based priors. Heliyon 2024;10:e26414. [PMID: 38390107 PMCID: PMC10882139 DOI: 10.1016/j.heliyon.2024.e26414] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Revised: 02/09/2024] [Accepted: 02/13/2024] [Indexed: 02/24/2024]  Open
8
Pal SC, Toumpanakis D, Wikstrom J, Ahuja CK, Strand R, Dhara AK. Multi-Level Residual Dual Attention Network for Major Cerebral Arteries Segmentation in MRA Toward Diagnosis of Cerebrovascular Disorders. IEEE Trans Nanobioscience 2024;23:167-175. [PMID: 37486852 DOI: 10.1109/tnb.2023.3298444] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/26/2023]
9
Ahmad N, Strand R, Sparresäter B, Tarai S, Lundström E, Bergström G, Ahlström H, Kullberg J. Automatic segmentation of large-scale CT image datasets for detailed body composition analysis. BMC Bioinformatics 2023;24:346. [PMID: 37723444 PMCID: PMC10506248 DOI: 10.1186/s12859-023-05462-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Accepted: 09/01/2023] [Indexed: 09/20/2023]  Open
10
Sjöholm T, Tarai S, Malmberg F, Strand R, Korenyushkin A, Enblad G, Ahlström H, Kullberg J. A whole-body diffusion MRI normal atlas: development, evaluation and initial use. Cancer Imaging 2023;23:87. [PMID: 37710346 PMCID: PMC10503210 DOI: 10.1186/s40644-023-00603-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Accepted: 08/28/2023] [Indexed: 09/16/2023]  Open
11
Jönsson H, Ekström S, Strand R, Pedersen MA, Molin D, Ahlström H, Kullberg J. An image registration method for voxel-wise analysis of whole-body oncological PET-CT. Sci Rep 2022;12:18768. [PMID: 36335130 PMCID: PMC9637131 DOI: 10.1038/s41598-022-23361-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Accepted: 10/31/2022] [Indexed: 11/08/2022]  Open
12
Sjöholm T, Kullberg J, Strand R, Engström M, Ahlström H, Malmberg F. Improved geometric accuracy of whole body diffusion-weighted imaging at 1.5T and 3T using reverse polarity gradients. Sci Rep 2022;12:11605. [PMID: 35804034 PMCID: PMC9270424 DOI: 10.1038/s41598-022-15872-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Accepted: 06/30/2022] [Indexed: 12/01/2022]  Open
13
Langner T, Mora AM, Strand R, Ahlström H, Kullberg J. Erratum for: MIMIR: Deep Regression for Automated Analysis of UK Biobank MRI Scans. Radiol Artif Intell 2022;4:e229001. [PMID: 35923374 PMCID: PMC9344204 DOI: 10.1148/ryai.229001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
14
Lind PM, Lind L, Salihovic S, Ahlström H, Michaelsson K, Kullberg J, Strand R. Serum levels of perfluoroalkyl substances (PFAS) and body composition - A cross-sectional study in a middle-aged population. ENVIRONMENTAL RESEARCH 2022;209:112677. [PMID: 35074350 DOI: 10.1016/j.envres.2022.112677] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Revised: 12/10/2021] [Accepted: 01/03/2022] [Indexed: 05/15/2023]
15
Fransson S, Tilly D, Strand R. Patient specific deep learning based segmentation for magnetic resonance guided prostate radiotherapy. Phys Imaging Radiat Oncol 2022;23:38-42. [PMID: 35769110 PMCID: PMC9234226 DOI: 10.1016/j.phro.2022.06.001] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2021] [Revised: 05/06/2022] [Accepted: 06/01/2022] [Indexed: 11/28/2022]  Open
16
Fransson S, Tilly D, Strand R. OC-0423 Patient specific deep learning contour propagation on prostate magnetic resonance linac patients. Radiother Oncol 2022. [DOI: 10.1016/s0167-8140(22)02559-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
17
Langner T, Martínez Mora A, Strand R, Ahlström H, Kullberg J. MIMIR: Deep Regression for Automated Analysis of UK Biobank MRI Scans. Radiol Artif Intell 2022;4:e210178. [PMID: 35652115 PMCID: PMC9152682 DOI: 10.1148/ryai.210178] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Revised: 02/25/2022] [Accepted: 03/23/2022] [Indexed: 11/11/2022]
18
Fransson S, Tilly D, Ahnesjö A, Nyholm T, Strand R. Intrafractional motion models based on principal components in Magnetic Resonance guided prostate radiotherapy. PHYSICS & IMAGING IN RADIATION ONCOLOGY 2021;20:17-22. [PMID: 34660917 PMCID: PMC8502906 DOI: 10.1016/j.phro.2021.09.004] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Revised: 09/15/2021] [Accepted: 09/15/2021] [Indexed: 11/18/2022]
19
Langner T, Gustafsson FK, Avelin B, Strand R, Ahlström H, Kullberg J. Uncertainty-aware body composition analysis with deep regression ensembles on UK Biobank MRI. Comput Med Imaging Graph 2021;93:101994. [PMID: 34624770 DOI: 10.1016/j.compmedimag.2021.101994] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 09/06/2021] [Accepted: 09/07/2021] [Indexed: 11/25/2022]
20
Lind L, Kullberg J, Ahlström H, Strand R. Relationships between carotid artery intima-media thickness and echogenicity and body composition using a new magnetic resonance imaging voxel-based technique. PLoS One 2021;16:e0254732. [PMID: 34297762 PMCID: PMC8301606 DOI: 10.1371/journal.pone.0254732] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2021] [Accepted: 07/01/2021] [Indexed: 11/18/2022]  Open
21
Eriksson JW, Visvanathar R, Kullberg J, Strand R, Skrtic S, Ekström S, Lubberink M, Lundqvist MH, Katsogiannos P, Pereira MJ, Ahlström H. Tissue-specific glucose partitioning and fat content in prediabetes and type 2 diabetes: whole-body PET/MRI during hyperinsulinemia. Eur J Endocrinol 2021;184:879-889. [PMID: 33852422 DOI: 10.1530/eje-20-1359] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/24/2020] [Accepted: 04/12/2021] [Indexed: 11/08/2022]
22
Strand R, Kullberg J, Ahlström H, Lind L. Relationships between plasma levels and six proinflammatory interleukins and body composition using a new magnetic resonance imaging voxel-based technique. Cytokine X 2021;3:100050. [PMID: 33604566 PMCID: PMC7885882 DOI: 10.1016/j.cytox.2020.100050] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Revised: 10/16/2020] [Accepted: 12/15/2020] [Indexed: 12/20/2022]  Open
23
Lind L, Strand R, Kullberg J, Ahlström H. Cardiovascular-related proteins and the abdominal visceral to subcutaneous adipose tissue ratio. Nutr Metab Cardiovasc Dis 2021;31:532-539. [PMID: 33153859 DOI: 10.1016/j.numecd.2020.09.010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Revised: 09/07/2020] [Accepted: 09/08/2020] [Indexed: 10/23/2022]
24
Ekström S, Pilia M, Kullberg J, Ahlström H, Strand R, Malmberg F. Faster dense deformable image registration by utilizing both CPU and GPU. J Med Imaging (Bellingham) 2021;8:014002. [PMID: 33542943 PMCID: PMC7849043 DOI: 10.1117/1.jmi.8.1.014002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 12/31/2020] [Indexed: 11/14/2022]  Open
25
Jansen MJA, Kuijf HJ, Dhara AK, Weaver NA, Jan Biessels G, Strand R, Pluim JPW. Patient-specific fine-tuning of convolutional neural networks for follow-up lesion quantification. J Med Imaging (Bellingham) 2020;7:064003. [PMID: 33344673 PMCID: PMC7744252 DOI: 10.1117/1.jmi.7.6.064003] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Accepted: 11/16/2020] [Indexed: 11/17/2022]  Open
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