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Miranda Furtado CL, Hansen M, Kogure GS, Ribeiro VB, Taylor N, Racy Soares M, Ferriani RA, Aston KI, Jenkins T, dos Reis RM. Resistance and aerobic training increases genome-wide DNA methylation in women with polycystic ovary syndrome. Epigenetics 2024; 19:2305082. [PMID: 38245873 PMCID: PMC10802204 DOI: 10.1080/15592294.2024.2305082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Accepted: 01/09/2024] [Indexed: 01/23/2024] Open
Abstract
Physical activity is a first-line treatment for polycystic ovary syndrome (PCOS). Resistance or aerobic exercise improves metabolic complications, reproductive outcomes, and quality of life in PCOS. DNA methylation reprogramming during exercise may be the major modifier behind these changes. We sought to evaluate genome-wide DNA methylation changes after supervised resistance and aerobic exercise in women with PCOS. Exercises were performed in 56 women with PCOS (resistance, n = 30; aerobic, n = 26), for 16 weeks (wks), three times per week, in 50-minute to one-hour sessions. Anthropometric indices and hormonal and metabolic parameters were measured before and after training. Genome-wide leukocyte DNA methylation was analysed by Infinium Human MethylationEPIC 850K BeadChip microarrays (Illumina). Both resistance and aerobic exercise improved anthropometric indices, metabolic dysfunction, and hyperandrogenism in PCOS after the training programme, but no differences were observed between the two exercises. Resistance and aerobic exercise increased genome-wide DNA methylation, although resistance changed every category in the CpG island context (islands, shores, shelve, and open sea), whereas aerobic exercise altered CpG shores and the open sea. Using a stringent FDR (>40), 6 significantly differentially methylated regions (DMRs) were observed in the resistance exercise cohort and 14 DRMs in the aerobic cohort, all of which were hypermethylated. The increase in genome-wide DNA methylation may be related to the metabolic and hormonal changes observed in PCOS after resistance and aerobic exercise. Since the mammalian genome is hypermethylated globally to prevent genomic instability and ageing, resistance and aerobic exercise may promote health and longevity through environmentally induced epigenetic changes.
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Affiliation(s)
- Cristiana Libardi Miranda Furtado
- Department of Gynecology and Obstetrics, Ribeirao Preto Medical School, University of Sao Paulo, Ribeirao Preto, Brazil
- Experimental Biology Center, Graduate Program in Medical Sciences, University of Fortaleza, Fortaleza, Ceará, Brazil
- Drug Research and Development Center, Postgraduate Program in Translational Medicine, Federal University of Ceará, Fortaleza, Brazil
| | - Megan Hansen
- Department of Cell Biology and Physiology, Brigham Young University, Provo, UT, USA
| | - Gislaine Satyko Kogure
- Department of Gynecology and Obstetrics, Ribeirao Preto Medical School, University of Sao Paulo, Ribeirao Preto, Brazil
| | - Victor Barbosa Ribeiro
- Department of Gynecology and Obstetrics, Ribeirao Preto Medical School, University of Sao Paulo, Ribeirao Preto, Brazil
| | - Nathanael Taylor
- Department of Cell Biology and Physiology, Brigham Young University, Provo, UT, USA
| | - Murilo Racy Soares
- Department of Gynecology and Obstetrics, Ribeirao Preto Medical School, University of Sao Paulo, Ribeirao Preto, Brazil
| | - Rui Alberto Ferriani
- Department of Gynecology and Obstetrics, Ribeirao Preto Medical School, University of Sao Paulo, Ribeirao Preto, Brazil
| | - Kenneth Ivan Aston
- Department of Surgery, University of Utah School of Medicine, Salt Lake City, UT, USA
| | - Timothy Jenkins
- Department of Cell Biology and Physiology, Brigham Young University, Provo, UT, USA
- Department of Surgery, University of Utah School of Medicine, Salt Lake City, UT, USA
| | - Rosana Maria dos Reis
- Department of Gynecology and Obstetrics, Ribeirao Preto Medical School, University of Sao Paulo, Ribeirao Preto, Brazil
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Trivedi P, Patel S, Edwards G, Jenkins T, Man WDC, Nolan CM. Five-Repetition Sit-to-Stand Test: Responsiveness and Minimal Important Difference in Idiopathic Pulmonary Fibrosis. Ann Am Thorac Soc 2024; 21:577-584. [PMID: 37847730 PMCID: PMC10995545 DOI: 10.1513/annalsats.202306-561oc] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Accepted: 10/16/2023] [Indexed: 10/19/2023] Open
Abstract
Rationale: Standing from a sitting position is an important activity of daily living. The five-repetition sit-to-stand test (5STS) is a simple physical performance test that measures the fastest time taken to stand five times from a chair with arms folded. It can be measured in most healthcare settings and at home, where traditional field walking tests may not be possible. The 5STS has been validated in community-dwelling older adults and people with chronic obstructive pulmonary disease, but data in idiopathic pulmonary fibrosis (IPF) are limited.Objectives: The aims of this cohort study were to establish the construct validity, responsiveness to pulmonary rehabilitation (PR), and minimal important difference (MID) of the 5STS in IPF.Methods: In 149 people with IPF, we compared the 5STS with measures of lung function, exercise capacity, quadriceps strength, breathlessness, and health-related quality of life. Responsiveness and effect sizes were determined by measuring the 5STS before and after PR. The MID was estimated using anchor- and distribution-based methods.Results: The 5STS correlated significantly with incremental shuttle walk test (ISW) (r = -0.55), isometric quadriceps maximum voluntary contraction (QMVC) (r = -0.45), Medical Research Council dyspnea scale score (r = 0.40), Chronic Respiratory Questionnaire-Total (r = -0.21), and King's Brief Interstitial Lung Disease Questionnaire-Total (r = -0.21) but not forced vital capacity percentage predicted or quadriceps one-repetition maximum (1RM). There was a significant but very weak correlation between change in 5STS and changes in Medical Research Council (r = 0.18), ISW (r = -0.21), and Chronic Respiratory Questionnaire-Total (r = -0.26) but no significant correlation with change in 1RM (r = -0.12) or QMVC (r = -0.18). 5STS time improved with PR (median [25th percentile, 75th percentile] change, -1.97 [-3.47, -0.62] s; P < 0.001). The effect size for the 5STS was 0.66 and higher than quadriceps 1RM, QMVC, and ISW. The mean (range) MID estimate was -1.93 (-1.85 to -2.10) seconds.Conclusions: In people with IPF, the 5STS is a valid physical performance measure that is responsive to exercise-based interventions and suitable for use in most healthcare settings.
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Affiliation(s)
- Puja Trivedi
- Harefield Pulmonary Rehabilitation Unit, Harefield Hospital, and
| | - Suhani Patel
- Harefield Respiratory Research Group, Heart, Lung, and Critical Care Clinical Group, Guy’s and St. Thomas’ NHS Foundation Trust, London, United Kingdom
- National Heart and Lung Institute, Imperial College London, London, United Kingdom
| | - George Edwards
- Harefield Respiratory Research Group, Heart, Lung, and Critical Care Clinical Group, Guy’s and St. Thomas’ NHS Foundation Trust, London, United Kingdom
| | - Timothy Jenkins
- Harefield Respiratory Research Group, Heart, Lung, and Critical Care Clinical Group, Guy’s and St. Thomas’ NHS Foundation Trust, London, United Kingdom
| | - William D.-C. Man
- Harefield Pulmonary Rehabilitation Unit, Harefield Hospital, and
- Harefield Respiratory Research Group, Heart, Lung, and Critical Care Clinical Group, Guy’s and St. Thomas’ NHS Foundation Trust, London, United Kingdom
- National Heart and Lung Institute, Imperial College London, London, United Kingdom
- Faculty of Life Sciences and Medicine, King’s College London, London, United Kingdom
| | - Claire M. Nolan
- Harefield Respiratory Research Group, Heart, Lung, and Critical Care Clinical Group, Guy’s and St. Thomas’ NHS Foundation Trust, London, United Kingdom
- Department of Health Sciences, College of Medicine, Health, and Life Sciences, Brunel University London, London, United Kingdom
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Pollard C, Aston K, Emery BR, Hill J, Jenkins T. Detection of neuron-derived cfDNA in blood plasma: a new diagnostic approach for neurodegenerative conditions. Front Neurol 2023; 14:1272960. [PMID: 38020656 PMCID: PMC10643874 DOI: 10.3389/fneur.2023.1272960] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Accepted: 10/17/2023] [Indexed: 12/01/2023] Open
Abstract
Neurodegenerative diseases, such as Alzheimer's disease (AD), pose significant challenges in early diagnosis, leading to irreversible brain damage and cognitive decline. In this study, we present a novel diagnostic approach that utilizes whole molecule analysis of neuron-derived cell-free DNA (cfDNA) as a biomarker for early detection of neurodegenerative diseases. By analyzing Differential Methylation Regions (DMRs) between purified cortical neurons and blood plasma samples, we identified robust biomarkers that accurately distinguish between neuronal and non-neuronal cfDNA. The use of cfDNA offers the advantage of convenient and minimally invasive sample collection compared to traditional cerebrospinal fluid or tissue biopsies, making this approach more accessible and patient friendly. Targeted sequencing at the identified DMR locus demonstrated that a conservative cutoff of 5% of neuron-derived cfDNA in blood plasma accurately identifies 100% of patients diagnosed with AD, showing promising potential for early disease detection. Additionally, this method effectively differentiated between patients with mild cognitive impairment (MCI) who later progressed to AD and those who did not, highlighting its prognostic capabilities. Importantly, the differentiation between patients with neurodegenerative diseases and healthy controls demonstrated the specificity of our approach. Furthermore, this cfDNA-based diagnostic strategy outperforms recently developed protein-based assays, which often lack accuracy and convenience. While our current approach focused on a limited set of loci, future research should explore the development of a more comprehensive model incorporating multiple loci to increase diagnostic accuracy further. Although certain limitations, such as technical variance associated with PCR amplification and bisulfite conversion, need to be addressed, this study emphasizes the potential of cfDNA analysis as a valuable tool for pre-symptomatic detection and monitoring of neurodegenerative diseases. With further development and validation, this innovative diagnostic strategy has the potential to significantly impact the field of neurodegenerative disease research and patient care, offering a promising avenue for early intervention and personalized therapeutic approaches.
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Affiliation(s)
- Chad Pollard
- Department of Cell Biology and Physiology, Brigham Young University, Provo, UT, United States
| | - Kenneth Aston
- Department of Surgery, Division of Urology, University of Utah, Salt Lake City, UT, United States
| | - Benjamin R. Emery
- Department of Surgery, Division of Urology, University of Utah, Salt Lake City, UT, United States
| | - Jonathon Hill
- Department of Cell Biology and Physiology, Brigham Young University, Provo, UT, United States
| | - Timothy Jenkins
- Department of Surgery, Division of Urology, University of Utah, Salt Lake City, UT, United States
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Bennion J, Jenkins T. High‐Pressure Characterization of Two Stereoisomers of Tetranitroester Cyclobutane. Propellants Explo Pyrotec 2022. [DOI: 10.1002/prep.202200221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Penagos-Tabares F, Khiaosa-Ard R, Schmidt M, Pacífico C, Faas J, Jenkins T, Nagl V, Sulyok M, Labuda R, Zebeli Q. Fungal species and mycotoxins in mouldy spots of grass and maize silages in Austria. Mycotoxin Res 2022; 38:117-136. [PMID: 35347677 PMCID: PMC9038934 DOI: 10.1007/s12550-022-00453-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2021] [Revised: 02/18/2022] [Accepted: 03/08/2022] [Indexed: 12/23/2022]
Abstract
Fungi and mycotoxins in silage can have detrimental consequences for both cattle and human health. This pilot study identified, via the routinary direct plating method, the dominant cultivable fungi in mouldy grass silages (GS) (n = 19) and maize silages (MS) (n = 28) from Austria. The profiles of regulated, modified, and emerging mycotoxins together with other fungal metabolites were analysed via LC-(ESI)MS/MS. Penicillium roqueforti, Saccharomyces spp., Geotrichum candidum, Aspergillus fumigatus and Monascus ruber were the most frequent fungal organisms identified. Other species including Mucor circinelloides, Fusarium spp. and Paecilomyces niveus were detected at lower frequencies. The presence of complex mixtures of toxic and potentially toxic compounds was evidenced by high levels and occurrences (≥ 50%) of Penicillium-produced compounds such as mycophenolic acid (MPA), roquefortines (ROCs), andrastins (ANDs) and marcfortine A. Mouldy silages contained toxins commonly produced by genus Fusarium (e.g. zearalenone (ZEN) and trichothecenes), Alternaria (like tenuazonic acid (TeA) and alternariol (AHO)) and Aspergillus (such as sterigmatocystin (STC)). Compared to those in GS, mouldy spots in MS presented significantly higher fungal counts and more diverse toxin profiles, in addition to superior levels of Fusarium spp., Penicillium spp. and total fungal metabolites. Generally, no correlation between mould counts and corresponding metabolites was detected, except for the counts of P. roqueforti, which were positively correlated with Penicillium spp. metabolites in mouldy MS. This study represents a first assessment of the fungal diversity in mouldy silage in Austria and highlights its potential role as a substantial contributor to contamination with complex mycotoxin mixtures in cattle diets.
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Affiliation(s)
- Felipe Penagos-Tabares
- Institute of Animal Nutrition and Functional Plant Compounds, University of Veterinary Medicine Vienna, Veterinaerplatz 1, 1210, Vienna, Austria
| | - Ratchaneewan Khiaosa-Ard
- Institute of Animal Nutrition and Functional Plant Compounds, University of Veterinary Medicine Vienna, Veterinaerplatz 1, 1210, Vienna, Austria.
| | - Marlene Schmidt
- Institute of Animal Nutrition and Functional Plant Compounds, University of Veterinary Medicine Vienna, Veterinaerplatz 1, 1210, Vienna, Austria
| | - Cátia Pacífico
- Institute of Animal Nutrition and Functional Plant Compounds, University of Veterinary Medicine Vienna, Veterinaerplatz 1, 1210, Vienna, Austria
| | - Johannes Faas
- BIOMIN Research Center, Technopark 1, 3430, Tulln a.d. Donau, Austria
| | - Timothy Jenkins
- BIOMIN Research Center, Technopark 1, 3430, Tulln a.d. Donau, Austria
| | - Veronika Nagl
- BIOMIN Research Center, Technopark 1, 3430, Tulln a.d. Donau, Austria
| | - Michael Sulyok
- Department IFA-Tulln, University of Natural Resources and Life Sciences (BOKU), Konrad Lorenzstrasse 20, 3430, Tulln, Austria
| | - Roman Labuda
- Institute of Food Safety, Food Technology and Veterinary Public Health, University of Veterinary Medicine Vienna, Veterinaerplatz 1, 1210, Vienna, Austria
- Research Platform Bioactive Microbial Metabolites (BiMM), 3430, Tulln a.d. Donau, Austria
| | - Qendrim Zebeli
- Institute of Animal Nutrition and Functional Plant Compounds, University of Veterinary Medicine Vienna, Veterinaerplatz 1, 1210, Vienna, Austria
- Department for Farm Animals and Veterinary Public Health, Christian-Doppler-Laboratory for Innovative Gut Health Concepts in Livestock (CDL-LiveGUT), University of Veterinary Medicine Vienna, Veterinaerplatz 1, 1210, Vienna, Austria
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Goodrich JM, Calkins MM, Caban-Martinez AJ, Stueckle T, Grant C, Calafat AM, Nematollahi A, Jung AM, Graber JM, Jenkins T, Slitt AL, Dewald A, Botelho JC, Beitel S, Littau S, Gulotta J, Wallentine D, Hughes J, Popp C, Burgess JL. Per- and polyfluoroalkyl substances, epigenetic age and DNA methylation: a cross-sectional study of firefighters. Epigenomics 2021; 13:1619-1636. [PMID: 34670402 PMCID: PMC8549684 DOI: 10.2217/epi-2021-0225] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2021] [Accepted: 09/27/2021] [Indexed: 01/09/2023] Open
Abstract
Background: Per- and polyfluoroalkyl substances (PFASs) are persistent chemicals that firefighters encounter. Epigenetic modifications, including DNA methylation, could serve as PFASs toxicity biomarkers. Methods: With a sample size of 197 firefighters, we quantified the serum concentrations of nine PFASs, blood leukocyte DNA methylation and epigenetic age indicators via the EPIC array. We examined the associations between PFASs with epigenetic age, site- and region-specific DNA methylation, adjusting for confounders. Results: Perfluorohexane sulfonate, perfluorooctanoate (PFOA) and the sum of branched isomers of perfluorooctane sulfonate (Sm-PFOS) were associated with accelerated epigenetic age. Branched PFOA, linear PFOS, perfluorononanoate, perfluorodecanoate and perfluoroundecanoate were associated with differentially methylated loci and regions. Conclusion: PFASs concentrations are associated with accelerated epigenetic age and locus-specific DNA methylation. The implications for PFASs toxicity merit further investigation.
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Affiliation(s)
- Jaclyn M Goodrich
- Department of Environmental Health Sciences, University of Michigan School of Public Health, 1415 Washington Heights, Ann Arbor, MI 48109, USA
| | - Miriam M Calkins
- National Institute for Occupational Safety & Health, Centers for Disease Control & Prevention, Cincinnati, OH 45226, USA
| | - Alberto J Caban-Martinez
- Department of Public Health Sciences, University of Miami Miller School of Medicine, Miami, FL 33136, USA
| | - Todd Stueckle
- National Institute for Occupational Safety & Health, Centers for Disease Control & Prevention, Morgantown, WV 26505, USA
| | - Casey Grant
- Fire Protection Research Foundation, Quincy, MA 02169, USA
| | - Antonia M Calafat
- National Center for Environmental Health, Centers for Disease Control & Prevention, Atlanta, GA 30341, USA
| | - Amy Nematollahi
- Department of Community, Environment & Policy, University of Arizona Mel & Enid Zuckerman College of Public Health, Tucson, AZ 85724, USA
| | - Alesia M Jung
- Department of Epidemiology & Biostatistics, University of Arizona Mel & Enid Zuckerman College of Public Health, Tucson, AZ 85724, USA
| | - Judith M Graber
- Department of Biostatistics & Epidemiology, Rutgers the State University of New Jersey, Piscataway, NJ 08854, USA
| | - Timothy Jenkins
- Department of Cell Biology & Physiology, Brigham Young University, Provo, UT 84602, USA
| | - Angela L Slitt
- Department of Biomedical Sciences, University of Rhode Island College of Pharmacy, Kingston, RI 02881, USA
| | - Alisa Dewald
- Department of Environmental Health Sciences, University of Michigan School of Public Health, 1415 Washington Heights, Ann Arbor, MI 48109, USA
| | - Julianne Cook Botelho
- National Center for Environmental Health, Centers for Disease Control & Prevention, Atlanta, GA 30341, USA
| | - Shawn Beitel
- Department of Community, Environment & Policy, University of Arizona Mel & Enid Zuckerman College of Public Health, Tucson, AZ 85724, USA
| | - Sally Littau
- Department of Community, Environment & Policy, University of Arizona Mel & Enid Zuckerman College of Public Health, Tucson, AZ 85724, USA
| | | | | | - Jeff Hughes
- Orange County Fire Authority, Irvine, CA 92602, USA
| | | | - Jefferey L Burgess
- Department of Community, Environment & Policy, University of Arizona Mel & Enid Zuckerman College of Public Health, Tucson, AZ 85724, USA
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Penagos-Tabares F, Khiaosa-ard R, Nagl V, Faas J, Jenkins T, Sulyok M, Zebeli Q. Mycotoxins, Phytoestrogens and Other Secondary Metabolites in Austrian Pastures: Occurrences, Contamination Levels and Implications of Geo-Climatic Factors. Toxins (Basel) 2021; 13:460. [PMID: 34209232 PMCID: PMC8310091 DOI: 10.3390/toxins13070460] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 06/28/2021] [Accepted: 06/29/2021] [Indexed: 12/31/2022] Open
Abstract
Pastures are key feed sources for dairy production and can be contaminated with several secondary metabolites from fungi and plants with toxic or endocrine-disrupting activities, which possess a risk for the health, reproduction and performance of cattle. This exploratory study aimed to determine the co-occurrences and concentrations of a wide range of mycotoxins, phytoestrogens and other secondary metabolites in grazing pastures. Representative samples of pastures were collected from 18 Austrian dairy farms (one sample per farm) between April to October 2019. After sample preparation (drying and milling) the pastures were subjected to multi-metabolite analysis using LC-MS/MS. In total, 68 metabolites were detected, including regulated zearalenone and deoxynivalenol (range: 2.16-138 and 107-505 μg/kg on a dry matter (DM) basis, respectively), modified (3-deoxynivalenol-glucoside, HT-2-glucoside) and emerging Fusarium mycotoxins (e.g., enniatins), ergot alkaloids and Alternaria metabolites along with phytoestrogens and other metabolites. Aflatoxins, fumonisins, T-2 toxin, HT-2 toxin and ochratoxins were not detected. Of the geo-climatic factors and botanical diversity investigated, the environment temperature (average of 2 pre-sampling months and the sampling month) was the most influential factor. The number of fungal metabolites linearly increased with increasing temperatures and temperatures exceeding 15 °C triggered an exponential increment in the concentrations of Fusarium and Alternaria metabolites and ergot alkaloids. In conclusion, even though the levels of regulated mycotoxins detected were below the EU guidance levels, the long-term exposure along with co-occurrence with modified and emerging mycotoxins might be an underestimated risk for grazing and forage-fed livestock. The one-year preliminary data points out a dominant effect of environmental temperature in the diversity and contamination level of fungal metabolites in pastures.
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Affiliation(s)
- Felipe Penagos-Tabares
- Institute of Animal Nutrition and Functional Plant Compounds, University of Veterinary Medicine, Veterinaerplatz 1, 1210 Vienna, Austria; (F.P.-T.); (Q.Z.)
| | - Ratchaneewan Khiaosa-ard
- Institute of Animal Nutrition and Functional Plant Compounds, University of Veterinary Medicine, Veterinaerplatz 1, 1210 Vienna, Austria; (F.P.-T.); (Q.Z.)
| | - Veronika Nagl
- BIOMIN Research Center, Technopark 1, 3430 Tulln, Austria; (V.N.); (J.F.); (T.J.)
| | - Johannes Faas
- BIOMIN Research Center, Technopark 1, 3430 Tulln, Austria; (V.N.); (J.F.); (T.J.)
| | - Timothy Jenkins
- BIOMIN Research Center, Technopark 1, 3430 Tulln, Austria; (V.N.); (J.F.); (T.J.)
| | - Michael Sulyok
- Department IFA-Tulln, University of Natural Resources and Life Sciences, Vienna (BOKU), Konrad Lorenzstrasse 20, 3430 Tulln, Austria;
| | - Qendrim Zebeli
- Institute of Animal Nutrition and Functional Plant Compounds, University of Veterinary Medicine, Veterinaerplatz 1, 1210 Vienna, Austria; (F.P.-T.); (Q.Z.)
- Christian-Doppler-Laboratory for Innovative Gut Health Concepts in Livestock (CDL-LiveGUT), Department for Farm Animals and Veterinary Public Health, University of Veterinary Medicine, Veterinaerplatz 1, 1210 Vienna, Austria
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Abstract
This article reviews the changing epidemiology of infections associated with injection drug use, perceived barriers to care, features of successful programs for outpatient antimicrobial treatment, models of shared decision making at the time of discharge, and linkage to preventative care after antimicrobial completion. In the search for patient-centered care associated with a rising substance use epidemic, one must continue to strive for novel collaborative approaches to ensure that each person is treated in the best way possible to successfully complete antimicrobial therapy, and then linked to a path of lifelong health care.
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Affiliation(s)
- Hermione Hurley
- Center for Addiction Medicine, Denver Health and Hospital Authority, 667 Bannock Street, MC 3450, Denver, CO 80204, USA.
| | - Monica Sikka
- Division of Infectious Diseases, Oregon Health and Science University, 3181 Southwest Sam Jackson Park Road, L457, Portland, OR 97239, USA
| | - Timothy Jenkins
- Division of Infectious Disease, Denver Health and Hospital Authority, 601 Broadway, MC4000, Denver, CO 80204, USA
| | - Evelyn Villacorta Cari
- Division of Infectious Disease, University of Kentucky College of Medicine, 740 South Limestone, K512, Lexington, KY 40536-0284, USA
| | - Alice Thornton
- Division of Infectious Disease, University of Kentucky College of Medicine, 740 South Limestone, K512, Lexington, KY 40536-0284, USA
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Saito J, Saito E, Arroyo J, Reynolds P, Jenkins T, Bikman B. Exposure to e‐cigarette smoke enhances sperm mitochondrial respiration in mature mice. FASEB J 2021. [DOI: 10.1096/fasebj.2021.35.s1.04897] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Jeremy Saito
- Department of Physiology & Developmental BiologyBrigham Young UniversityProvoUT
| | - Erin Saito
- Department of Physiology & Developmental BiologyBrigham Young UniversityProvoUT
| | - Juan Arroyo
- Physiology & Developmental BiologyBrigham Young UniversityProvoUT
| | - Paul Reynolds
- Physiology & Developmental BiologyBrigham Young UniversityProvoUT
| | - Timothy Jenkins
- Physiology & Developmental BiologyBrigham Young UniversityProvoUT
| | - Benjamin Bikman
- Physiology & Developmental BiologyBrigham Young UniversityProvoUT
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Goodrich JM, Furlong MA, Caban-Martinez AJ, Jung AM, Batai K, Jenkins T, Beitel S, Littau S, Gulotta J, Wallentine D, Hughes J, Popp C, Calkins MM, Burgess JL. Differential DNA Methylation by Hispanic Ethnicity Among Firefighters in the United States. Epigenet Insights 2021; 14:25168657211006159. [PMID: 35036834 PMCID: PMC8756104 DOI: 10.1177/25168657211006159] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Accepted: 03/02/2021] [Indexed: 01/04/2023] Open
Abstract
Firefighters are exposed to a variety of environmental hazards and are at increased risk for multiple cancers. There is evidence that risks differ by ethnicity, yet the biological or environmental differences underlying these differences are not known. DNA methylation is one type of epigenetic regulation that is altered in cancers. In this pilot study, we profiled DNA methylation with the Infinium MethylationEPIC in blood leukocytes from 31 Hispanic white and 163 non-Hispanic white firefighters. We compared DNA methylation (1) at 12 xenobiotic metabolizing genes and (2) at all loci on the array (>740 000), adjusting for confounders. Five of the xenobiotic metabolizing genes were differentially methylated at a raw P-value <.05 when comparing the 2 ethnic groups, yet were not statistically significant at a 5% false discovery rate (q-value <.05). In the epigenome-wide analysis, 76 loci exhibited DNA methylation differences at q < .05. Among these, 3 CpG sites in the promoter region of the biotransformation gene SULT1C2 had lower methylation in Hispanic compared to non-Hispanic firefighters. Other differentially methylated loci included genes that have been implicated in carcinogenesis in published studies (FOXK2, GYLTL1B, ZBTB16, ARHGEF10, and more). In this pilot study, we report differential DNA methylation between Hispanic and non-Hispanic firefighters in xenobiotic metabolism genes and other genes with functions related to cancer. Epigenetic susceptibility by ethnicity merits further study as this may alter risk for cancers linked to toxic exposures.
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Affiliation(s)
- Jaclyn M Goodrich
- Department of Environmental Health Sciences, University of Michigan School of Public Health, Ann Arbor, MI, USA,Jaclyn M Goodrich, Department of Environmental Health Sciences, University of Michigan School of Public Health, 1415 Washington Heights, Ann Arbor, MI 48109, USA.
| | - Melissa A Furlong
- Department of Community, Environment and Policy, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, AZ, USA
| | - Alberto J Caban-Martinez
- Department of Public Health Sciences, University of Miami Miller School of Medicine, Miami, FL, USA
| | - Alesia M Jung
- Department of Epidemiology and Biostatistics, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, AZ, USA
| | - Ken Batai
- Department of Urology, University of Arizona, Tucson, AZ, USA
| | - Timothy Jenkins
- Department of Physiology and Developmental Biology, Brigham Young University, Provo, UT, USA
| | - Shawn Beitel
- Department of Community, Environment and Policy, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, AZ, USA
| | - Sally Littau
- Department of Community, Environment and Policy, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, AZ, USA
| | | | | | - Jeff Hughes
- Orange County Fire Authority, Irvine, CA, USA
| | | | - Miriam M Calkins
- National Institute for Occupational Safety and Health, Centers for Disease Control and Prevention, Cincinnati, OH, USA
| | - Jefferey L Burgess
- Department of Community, Environment and Policy, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, AZ, USA
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11
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Stephens M, Yung CS, Tomlin NA, Vaskuri A, Ryger I, Spidell M, White MG, Jenkins T, Landry J, Sereke T, Lehman JH. Room temperature laser power standard using a microfabricated, electrical substitution bolometer. Rev Sci Instrum 2021; 92:025107. [PMID: 33648050 DOI: 10.1063/5.0032366] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Accepted: 12/29/2020] [Indexed: 06/12/2023]
Abstract
The design and performance of a room temperature electrical substitution radiometer for use as an absolute standard for measuring continuous-wave laser power over a wide range of wavelengths, beam diameters, and powers are described. The standard achieves an accuracy of 0.46% (k = 2) for powers from 10 mW to 100 mW and 0.83% (k = 2) for powers from 1 mW to 10 mW and can accommodate laser beam diameters (1/e2) up to 11 mm and wavelengths from 300 nm to 2 μm. At low power levels, the uncertainty is dominated by sensitivity to fluctuations in the thermal environment. The core of the instrument is a planar, silicon microfabricated bolometer with vertically aligned carbon nanotube absorbers, commercial surface mount thermistors, and an integrated heater. Where possible, commercial electronics and components were used. The performance was validated by comparing it to a National Institute of Standards and Technology primary standard through a transfer standard silicon trap detector and by comparing it to the legacy "C-series" standards in operation at the U.S. Air Force Metrology and Calibration Division (AFMETCAL).
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Affiliation(s)
- M Stephens
- Applied Physics Division, National Institute of Standards and Technology, Boulder, Colorado 80305, USA
| | - C S Yung
- Applied Physics Division, National Institute of Standards and Technology, Boulder, Colorado 80305, USA
| | - N A Tomlin
- Applied Physics Division, National Institute of Standards and Technology, Boulder, Colorado 80305, USA
| | - A Vaskuri
- Applied Physics Division, National Institute of Standards and Technology, Boulder, Colorado 80305, USA
| | - I Ryger
- Applied Physics Division, National Institute of Standards and Technology, Boulder, Colorado 80305, USA
| | - M Spidell
- Applied Physics Division, National Institute of Standards and Technology, Boulder, Colorado 80305, USA
| | - M G White
- Applied Physics Division, National Institute of Standards and Technology, Boulder, Colorado 80305, USA
| | - T Jenkins
- Air Force Life Cycle Management Center, Air Force Metrology and Calibration Program, Heath, Ohio 43056, USA
| | - J Landry
- Air Force Life Cycle Management Center, Air Force Metrology and Calibration Program, Heath, Ohio 43056, USA
| | - T Sereke
- Air Force Life Cycle Management Center, Air Force Metrology and Calibration Program, Heath, Ohio 43056, USA
| | - J H Lehman
- Applied Physics Division, National Institute of Standards and Technology, Boulder, Colorado 80305, USA
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12
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Jenkins T, Beverley Z, Jones A. P301 Yoga as exercise for cystic fibrosis inpatients. J Cyst Fibros 2020. [DOI: 10.1016/s1569-1993(20)30630-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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13
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Khoshal AK, Novak B, Martin PGP, Jenkins T, Neves M, Schatzmayr G, Oswald IP, Pinton P. Co-occurrence of DON and Emerging Mycotoxins in Worldwide Finished Pig Feed and Their Combined Toxicity in Intestinal Cells. Toxins (Basel) 2019; 11:E727. [PMID: 31835876 PMCID: PMC6950336 DOI: 10.3390/toxins11120727] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2019] [Revised: 12/05/2019] [Accepted: 12/06/2019] [Indexed: 11/17/2022] Open
Abstract
Food and feed can be naturally contaminated by several mycotoxins, and concern about the hazard of exposure to mycotoxin mixtures is increasing. In this study, more than 800 metabolites were analyzed in 524 finished pig feed samples collected worldwide. Eighty-eight percent of the samples were co-contaminated with deoxynivalenol (DON) and other regulated/emerging mycotoxins. The Top 60 emerging/regulated mycotoxins co-occurring with DON in pig feed shows that 48%, 13%, 8% and 12% are produced by Fusarium, Aspergillus, Penicillium and Alternaria species, respectively. Then, the individual and combined toxicity of DON and the 10 most prevalent emerging mycotoxins (brevianamide F, cyclo-(L-Pro-L-Tyr), tryptophol, enniatins A1, B, B1, emodin, aurofusarin, beauvericin and apicidin) was measured at three ratios corresponding to pig feed contamination. Toxicity was assessed by measuring the viability of intestinal porcine epithelial cells, IPEC-1, at 48-h. BRV-F, Cyclo and TRPT did not alter cell viability. The other metabolites were ranked in the following order of toxicity: apicidin > enniatin A1 > DON > beauvericin > enniatin B > enniatin B1 > emodin > aurofusarin. In most of the mixtures, combined toxicity was similar to the toxicity of DON alone. In terms of pig health, these results demonstrate that the co-occurrence of emerging mycotoxins that we tested with DON does not exacerbate toxicity.
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Affiliation(s)
- Abdullah Khan Khoshal
- Toxalim (Research Center in Food Toxicology), Université de Toulouse, INRAE, ENVT, INP-Purpan, UPS, 180 chemin de tournefeuille, Cedex 3, F-31027 Toulouse, France; (A.K.K.); (P.G.P.M.); (M.N.)
| | - Barbara Novak
- BIOMIN Research Center, Technopark 1, 3430 Tulln, Austria; (B.N.); (T.J.); (G.S.)
| | - Pascal G. P. Martin
- Toxalim (Research Center in Food Toxicology), Université de Toulouse, INRAE, ENVT, INP-Purpan, UPS, 180 chemin de tournefeuille, Cedex 3, F-31027 Toulouse, France; (A.K.K.); (P.G.P.M.); (M.N.)
| | - Timothy Jenkins
- BIOMIN Research Center, Technopark 1, 3430 Tulln, Austria; (B.N.); (T.J.); (G.S.)
| | - Manon Neves
- Toxalim (Research Center in Food Toxicology), Université de Toulouse, INRAE, ENVT, INP-Purpan, UPS, 180 chemin de tournefeuille, Cedex 3, F-31027 Toulouse, France; (A.K.K.); (P.G.P.M.); (M.N.)
| | - Gerd Schatzmayr
- BIOMIN Research Center, Technopark 1, 3430 Tulln, Austria; (B.N.); (T.J.); (G.S.)
| | - Isabelle P. Oswald
- Toxalim (Research Center in Food Toxicology), Université de Toulouse, INRAE, ENVT, INP-Purpan, UPS, 180 chemin de tournefeuille, Cedex 3, F-31027 Toulouse, France; (A.K.K.); (P.G.P.M.); (M.N.)
| | - Philippe Pinton
- Toxalim (Research Center in Food Toxicology), Université de Toulouse, INRAE, ENVT, INP-Purpan, UPS, 180 chemin de tournefeuille, Cedex 3, F-31027 Toulouse, France; (A.K.K.); (P.G.P.M.); (M.N.)
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14
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Patterson A, Sarode A, Shaver L, Al-Kindi S, Alaiti A, Zullo MZ, Longenecker C, Jenkins T, Rajagopalan S. P591Insights from Exercise Cardiac Magnetic Resonance Imaging (ExMR) With Cardiopulmonary Testing in HIV Patients. Eur Heart J 2019. [DOI: 10.1093/eurheartj/ehz747.0200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Abstract
Background
Cardiac magnetic resonance imaging in conjunction with exercise (exMR) and cardiopulmonary testing (CPET) to evaluate cardiopulmonary function has the potential of uncovering poorly understood mechanisms of dyspnea in patients that cannot be otherwise discerned with a single imaging modality.
Purpose
We prospectively evaluated the value of this technique in dyspneic patients with HIV without obvious cardiopulmonary etiologies to comprehensively assess mechanisms of dyspnea.
Methods
Thirty-six HIV patients with dyspnea without obvious cardiopulmonary causes [normal chest x-ray, normal resting LVEF and resting pulmonary artery (PA) pressures <40 mm Hg on echo] and exercise limitation [Modified Medical Research Council (MMRC) dyspnea scale >2] underwent testing using a novel combined exMR/CPET platform (Figure 1). Resting and exercise magnetic resonance imaging (MRI), including flow velocities across the pulmonary artery together with CPET was evaluated at pre and post peak stress. We analyzed the correlation between CPET and MRI pre and peak exercise variables.
Results
The mean age was 51 years; 60% were male; and mean absolute CD4 count was 718. Ventilator efficiency at peak exercise (Peak VO2) did not correlate with exMR parameters. Peak VE/VCO2 was negatively associated with peak LV and RV stroke volume (p values 0.002 & 0.005 respectively). There was a positive relationship between peak petCO2and LV cardiac output (p=0.02), peak exercise RV stroke volume (p=0.003), peak exercise LV stroke volume (p=0.02). Absolute CD4 count was positively correlated with post exercise pulmonary artery velocity (p=0.045). We found no correlation between absolute CD8 count and CMR and CPET exercise parameters.
Figure 1. MRI-CPET setting
Conclusion
HIV patients appear to have an impairment of ventilatory efficiency, exemplified by the association of VE/VCO2and PetCO2 with exMR parameters in the context of normal RV/LV contractile reserve and no evidence of Pulmonary arterial hypertension. A combined CPET/exMRI platform may provide new insight into cardiopulmonary function and the factors influencing exercise tolerance in symptomatic HIV patients.
Acknowledgement/Funding
7R01HL125060-03
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Affiliation(s)
- A Patterson
- University Hospitals Case Medical Center, Cleveland, United States of America
| | - A Sarode
- University Hospitals Case Medical Center, Cleveland, United States of America
| | - L Shaver
- University Hospitals Case Medical Center, Cleveland, United States of America
| | - S Al-Kindi
- University Hospitals Case Medical Center, Cleveland, United States of America
| | - A Alaiti
- University Hospitals Case Medical Center, Cleveland, United States of America
| | - M Z Zullo
- University Hospitals Case Medical Center, Cleveland, United States of America
| | - C Longenecker
- University Hospitals Case Medical Center, Cleveland, United States of America
| | - T Jenkins
- University Hospitals Case Medical Center, Cleveland, United States of America
| | - S Rajagopalan
- University Hospitals Case Medical Center, Cleveland, United States of America
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15
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Gruber-Dorninger C, Jenkins T, Schatzmayr G. Global Mycotoxin Occurrence in Feed: A Ten-Year Survey. Toxins (Basel) 2019; 11:E375. [PMID: 31252650 PMCID: PMC6669473 DOI: 10.3390/toxins11070375] [Citation(s) in RCA: 351] [Impact Index Per Article: 70.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2019] [Revised: 06/24/2019] [Accepted: 06/25/2019] [Indexed: 12/05/2022] Open
Abstract
Mycotoxins contaminating animal feed can exert toxic effects in animals and be transferred into animal products. Therefore, mycotoxin occurrence in feed should be monitored. To this end, we performed a large-scale global survey of mycotoxin contamination in feed and assessed regional differences and year-to-year variation of mycotoxin occurrence. Concentrations of aflatoxin B1, zearalenone, fumonisins, ochratoxin A, deoxynivalenol, and T-2 toxin were analyzed in 74,821 samples of feed and feed raw materials (e.g., maize, wheat, soybean) collected from 100 countries from 2008 to 2017. In total, 88% of the samples were contaminated with at least one mycotoxin. Mycotoxin occurrence showed distinct regional trends and climate was a key determinant governing these trends. In most regions, the majority of samples complied with maximum levels and guidance values for mycotoxins in animal feed that are in effect in the European Union. However, 41.1%, 38.5%, and 20.9% of samples from South Asia, Sub-Saharan Africa, and Southeast Asia, respectively, exceeded the maximum level for aflatoxin B1 (20 µg/kg). In several regions, mycotoxin concentrations in maize showed a pronounced year-to-year variation that could be explained by rainfall or temperature during sensitive periods of grain development. A large fraction of samples (64%) was co-contaminated with ≥ 2 mycotoxins. Most frequently observed mycotoxin mixtures were combinations of deoxynivalenol, zearalenone, and fumonisins, as well as fumonisins and aflatoxin B1. Deoxynivalenol and zearalenone concentrations were correlated in maize and wheat. In conclusion, according to an extensive global survey, mycotoxin (co-)contamination of animal feed is common, shows regional trends, and is governed in part by climate and weather.
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16
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Pigeault R, Cozzarolo CS, Choquet R, Strehler M, Jenkins T, Delhaye J, Bovet L, Wassef J, Glaizot O, Christe P. Haemosporidian infection and co-infection affect host survival and reproduction in wild populations of great tits. Int J Parasitol 2018; 48:1079-1087. [PMID: 30391229 DOI: 10.1016/j.ijpara.2018.06.007] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Revised: 06/06/2018] [Accepted: 06/19/2018] [Indexed: 12/20/2022]
Abstract
Theoretical studies predict that parasitic infection may impact host longevity and ultimately modify the trade-off between reproduction and survival. Indeed, a host may adjust its energy allocation in current reproduction to balance the negative effects of parasitism on its survival prospects. However, very few empirical studies tested this prediction. Avian haemosporidian parasites provide an excellent opportunity to assess the influence of parasitic infection on both host survival and reproduction. They are represented by three main genera (Plasmodium, Haemoproteus and Leucocytozoon) and are highly prevalent in many bird populations. Here we provide the first known long-term field study (12 years) to explore the effects of haemosporidian parasite infection and co-infection on fitness in two populations of great tits (Parus major), using a multistate modeling framework. We found that while co-infection decreased survival probability, both infection and co-infection increased reproductive success. This study provides evidence that co-infections can be more virulent than single infections. It also provides support for the life-history theory which predicts that reproductive effort can be adjusted to balance one's fitness when survival prospects are challenged.
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Affiliation(s)
- R Pigeault
- Département d'Ecologie & Evolution, Lausanne, Switzerland.
| | - C-S Cozzarolo
- Département d'Ecologie & Evolution, Lausanne, Switzerland
| | - R Choquet
- Centre d'Ecologie Fonctionnelle et Evolutive, UMR 5175, Montpellier, France
| | - M Strehler
- Département d'Ecologie & Evolution, Lausanne, Switzerland
| | - T Jenkins
- Département d'Ecologie & Evolution, Lausanne, Switzerland; Musée cantonal de zoologie, Lausanne, Switzerland
| | - J Delhaye
- Département d'Ecologie & Evolution, Lausanne, Switzerland; Evolution et Diversité Biologique, Université Toulouse 3, France
| | - L Bovet
- Département d'Ecologie & Evolution, Lausanne, Switzerland
| | - J Wassef
- Département d'Ecologie & Evolution, Lausanne, Switzerland
| | - O Glaizot
- Musée cantonal de zoologie, Lausanne, Switzerland
| | - P Christe
- Département d'Ecologie & Evolution, Lausanne, Switzerland
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17
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Abstract
As animal feed is prone to infestation with mycotoxin-producing fungi, mycotoxin contamination of feed should be monitored. Here, we report a multi-mycotoxin survey of feed samples from Africa. We determined the concentrations of aflatoxins, fumonisins, deoxynivalenol, T-2 toxin, zearalenone and ochratoxin A in 1,045 samples of finished feed and feed raw materials (maize, maize silage, other cereals, etc.) from South Africa and 318 samples from Algeria, Tunisia, Morocco, Senegal, Côte d’Ivoire, Nigeria, Ghana, Namibia, Uganda, Kenya, Tanzania, Zambia and Madagascar. We compared the measured mycotoxin concentrations to regulatory limits or guidance values that are in effect in the European Union and analysed the co-occurrence of these mycotoxins. To determine the occurrence of other fungal secondary metabolites, a subset of the samples was analysed using a multi-analyte liquid chromatography tandem mass spectrometry-based method for the simultaneous detection of over 700 fungal metabolites. We found that 33.3% of maize samples and 54.4% of finished feed samples from Senegal, Côte d’Ivoire, Nigeria, Ghana, Namibia, Uganda, Kenya and Tanzania exceeded the European regulatory limit of 20 ng/g aflatoxins. The Fusarium mycotoxins zearalenone, fumonisins and deoxynivalenol were prevalent in all commodities from all countries, but concentrations were in most cases below European guidance values. Concentrations of deoxynivalenol and zearalenone were correlated. Several other Fusarium metabolites occurred frequently (e.g. moniliformin, beauvericin, aurofusarin) or in high concentrations (e.g. aurofusarin, fusaproliferin). Furthermore, high levels of diplodiatoxin were occasionally detected in samples from South Africa and the Alternaria metabolite tenuazonic acid was prevalent and reached high concentrations. In conclusion, aflatoxins frequently occurred in African feed samples in potentially unsafe concentrations. While Fusarium mycotoxins mostly occurred in concentrations below European guidance values, a correlation between deoxynivalenol and zearalenone concentrations suggests that toxicological interactions of these compounds deserve attention. Several less investigated fungal secondary metabolites occurred frequently or reached high concentrations.
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Affiliation(s)
| | - T. Jenkins
- BIOMIN Research Center, Technopark 1, 3430 Tulln, Austria
| | - G. Schatzmayr
- BIOMIN Research Center, Technopark 1, 3430 Tulln, Austria
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18
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Samuel R, Feng H, Jafek A, Despain D, Jenkins T, Gale B. Microfluidic-based sperm sorting & analysis for treatment of male infertility. Transl Androl Urol 2018; 7:S336-S347. [PMID: 30159240 PMCID: PMC6087839 DOI: 10.21037/tau.2018.05.08] [Citation(s) in RCA: 44] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2017] [Accepted: 05/07/2018] [Indexed: 11/06/2022] Open
Abstract
Microfluidics technology has emerged as an enabling technology for different fields of medicine and life sciences. One such field is male infertility where microfluidic technologies are enabling optimization of sperm sample preparation and analysis. In this chapter we review how microfluidic technology has been used for sperm quantification, sperm quality analysis, and sperm manipulation and isolation with subsequent use of the purified sperm population for treatment of male infertility. As we discuss demonstrations of microfluidic sperm sorting/manipulation/analysis, we highlight systems that have demonstrated feasibility towards clinical adoption or have reached commercialization in the male infertility market. We then review microfluidic-based systems that facilitate non-invasive identification and sorting of viable sperm for in vitro fertilization. Finally, we explore commercialization challenges associated with microfluidic sperm sorting systems and provide suggestions and future directions to best overcome them.
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Affiliation(s)
- Raheel Samuel
- Department of Surgery, School of Medicine, University of Utah, Salt Lake City, Utah, USA
- Department of Mechanical Engineering, University of Utah, Salt Lake City, Utah, USA
| | - Haidong Feng
- Department of Mechanical Engineering, University of Utah, Salt Lake City, Utah, USA
| | - Alex Jafek
- Department of Mechanical Engineering, University of Utah, Salt Lake City, Utah, USA
| | - Dillon Despain
- Department of Mechanical Engineering, Brigham Young University, Provo, Utah, USA
| | - Timothy Jenkins
- Department of Surgery, School of Medicine, University of Utah, Salt Lake City, Utah, USA
| | - Bruce Gale
- Department of Mechanical Engineering, University of Utah, Salt Lake City, Utah, USA
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19
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Abstract
The awareness of mycotoxin-related issues in aquaculture industry has grown as manufacturers and producers realise the importance of mycotoxins, beyond aflatoxin, and their potential to impact production. During a period of one year (January 2016 – December 2016), 175 samples of different plant proteins, aquaculture/fishery by-products and finished aquaculture feeds, were analysed. Samples were tested for aflatoxins (aflatoxin B1, B2, G1 and G2); zearalenone; type B trichothecenes (deoxynivalenol (DON); nivalenol; 3-acetyldeoxynivalenol; 15-acetyldeoxynivalenol and fusarenon X-glucoside); fumonisins (fumonisin B1, B2 and B3); type A trichothecenes (T-2 and HT-2 toxin; diacetoxyscirpenol and neosolaniol); and ochratoxin A. All samples were sourced in Southeast Asia. Within the analysed samples, 4% were free of detectable mycotoxins. 8% of the samples had one mycotoxin and 88% of the samples were contaminated with more than one mycotoxin. The current work show similarity to previous studies, that mycotoxin occurrence in plant-meals, and consequently in finished feeds, is quite variable and confirms that aflatoxin is not the main mycotoxin in aquafeeds. Mycotoxin occurrence in fish and shrimp feeds in the present samples were higher than reported in previous studies for the same region. In samples of shrimp feed with DON detected, the mean average DON level was 882 μg/kg with a maximum level of 2,287 μg/kg. These values are within the reported sensitivity levels of white leg shrimp (Litopenaeus vannamei). Despite the limited number and short period of sampling, this inventory study helps address a knowledge gap of mycotoxin occurrence in feeds specifically destined for the aquaculture industry.
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Affiliation(s)
- R.A. Gonçalves
- BIOMIN Holding GmbH, Erber Campus 1, 3131 Getzersdorf, Austria
| | - U. Hofstetter
- BIOMIN Holding GmbH, Erber Campus 1, 3131 Getzersdorf, Austria
| | - D. Schatzmayr
- BIOMIN Research Center, Technopark 1, 3430 Tulln, Austria
| | - T. Jenkins
- BIOMIN Holding GmbH, Erber Campus 1, 3131 Getzersdorf, Austria
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20
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Zhang GP, Jenkins T, Bennett M, Bai YH. Manifestation of intra-atomic 5d6s-4f exchange coupling in photoexcited gadolinium. J Phys Condens Matter 2017; 29:495807. [PMID: 29105644 DOI: 10.1088/1361-648x/aa986c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Intra-atomic exchange couplings (IECs) between 5d6s and 4f electrons are ubiquitous in rare-earth metals and play a critical role in spin dynamics. However, detecting them in real time domain has been difficult. Here we show the direct evidence of IEC between 5d6s and 4f electrons in gadolinium. Upon femtosecond laser excitation, 5d6s electrons are directly excited; their majority bands shift toward the Fermi level while their minority bands do the opposite. For the first time, our first-principles minority shift now agrees with the experiment quantitatively. Excited 5d6s electrons lower the exchange potential barrier for 4f electrons, so the 4f states are also shifted in energy, a prediction that can be tested experimentally. Although a significant number of 5d6s electrons, some several eV below the Fermi level, are excited out of the Fermi sea, there is no change in the 4f states, a clear manifestation of intra-atomic exchange coupling.
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Affiliation(s)
- G P Zhang
- Department of Physics, Indiana State University, Terre Haute, IN 47809, United States of America
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21
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Jenkins T, Katsamenis OL, Andriotis OG, Coutts LV, Carter B, Dunlop DG, Oreffo ROC, Cooper C, Harvey NC, Thurner PJ, The OStEO Group. The inferomedial femoral neck is compromised by age but not disease: Fracture toughness and the multifactorial mechanisms comprising reference point microindentation. J Mech Behav Biomed Mater 2017; 75:399-412. [PMID: 28803114 PMCID: PMC5619645 DOI: 10.1016/j.jmbbm.2017.06.036] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2017] [Revised: 06/26/2017] [Accepted: 06/28/2017] [Indexed: 12/19/2022]
Abstract
The influence of ageing on the fracture mechanics of cortical bone tissue is well documented, though little is known about if and how related material properties are further affected in two of the most prominent musculoskeletal diseases, osteoporosis and osteoarthritis (OA). The femoral neck, in close proximity to the most pertinent osteoporotic fracture site and near the hip joint affected by osteoarthritis, is a site of particular interest for investigation. We have recently shown that Reference Point micro-Indentation (RPI) detects differences between cortical bone from the femoral neck of healthy, osteoporotic fractured and osteoarthritic hip replacement patients. RPI is a new technique with potential for in vivo bone quality assessment. However, interpretation of RPI results is limited because the specific changes in bone properties with pathology are not well understood and, further, because it is not conclusive what properties are being assessed by RPI. Here, we investigate whether the differences previously detected between healthy and diseased cortical bone from the femoral neck might reflect changes in fracture toughness. Together with this, we investigate which additional properties are reflected in RPI measures. RPI (using the Biodent device) and fracture toughness tests were conducted on samples from the inferomedial neck of bone resected from donors with: OA (41 samples from 15 donors), osteoporosis (48 samples from 14 donors) and non age-matched cadaveric controls (37 samples from 10 donoros) with no history of bone disease. Further, a subset of indented samples were imaged using micro-computed tomography (3 osteoporotic and 4 control samples each from different donors) as well as fluorescence microscopy in combination with serial sectioning after basic fuchsin staining (7 osteoporotic and 5 control samples from 5 osteoporotic and 5 control donors). In this study, the bulk indentation and fracture resistance properties of the inferomedial femoral neck in osteoporotic fracture, severe OA and control bone were comparable (p > 0.05 for fracture properties and <10% difference for indentation) but fracture toughness reduced with advancing age (7.0% per decade, r = -0.36, p = 0.029). Further, RPI properties (in particular, the indentation distance increase, IDI) showed partial correlation with fracture toughness (r = -0.40, p = 0.023) or derived elastic modulus (r = -0.40, p = 0.023). Multimodal indent imaging revealed evidence of toughening mechanisms (i.e. crack deflection, bridging and microcracking), elastoplastic response (in terms of the non-conical imprint shape and presence of pile-up) and correlation of RPI with damage extent (up to r = 0.79, p = 0.034) and indent size (up to r = 0.82, p < 0.001). Therefore, crack resistance, deformation resistance and, additionally, micro-structure (porosity: r = 0.93, p = 0.002 as well as pore proximity: r = -0.55, p = 0.027 for correlation with IDI) are all contributory to RPI. Consequently, it becomes clear that RPI measures represent a multitude of properties, various aspects of bone quality, but are not necessarily strongly correlated to a single mechanical property. In addition, osteoporosis or osteoarthritis do not seem to further influence fracture toughness of the inferomedial femoral neck beyond natural ageing. Since bone is highly heterogeneous, whether this finding can be extended to the whole femoral neck or whether it also holds true for other femoral neck quadrants or other material properties remains to be shown.
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Affiliation(s)
- T Jenkins
- Bioengineering Science Research Group, Faculty of Engineering and the Environment, University of Southampton, Southampton, UK; Gait Laboratory, Queen Mary's Hospital, St George's University Hospitals NHS Foundation Trust, London, UK
| | - O L Katsamenis
- Bioengineering Science Research Group, Faculty of Engineering and the Environment, University of Southampton, Southampton, UK; µ-VIS X-ray Imaging Centre, Faculty of Engineering and the Environment, University of Southampton, SO17 1BJ Southampton, UK
| | - O G Andriotis
- Institute of Lightweight Design and Structural Biomechanics, Vienna University of Technology, Vienna, Austria
| | - L V Coutts
- Bioengineering Science Research Group, Faculty of Engineering and the Environment, University of Southampton, Southampton, UK
| | - B Carter
- Bioengineering Science Research Group, Faculty of Engineering and the Environment, University of Southampton, Southampton, UK
| | - D G Dunlop
- University Hospital Southampton NHS Foundation Trust, Southampton, UK
| | - R O C Oreffo
- Bone and Joint Research Group, Centre for Human Development, Stem Cells and Regeneration, Institute for Development Sciences, Faculty of Medicine, University of Southampton, Southampton, UK
| | - C Cooper
- MRC Lifecourse Epidemiology Unit, University of Southampton, Southampton, UK; NIHR Musculoskeletal Biomedical Research Unit, University of Oxford, Oxford, UK; NIHR Biomedical Research Centre, University of Southampton and University Hospital Southampton NHS Foundation Trust, Southampton, UK
| | - N C Harvey
- MRC Lifecourse Epidemiology Unit, University of Southampton, Southampton, UK; NIHR Biomedical Research Centre, University of Southampton and University Hospital Southampton NHS Foundation Trust, Southampton, UK
| | - P J Thurner
- Bioengineering Science Research Group, Faculty of Engineering and the Environment, University of Southampton, Southampton, UK; Institute of Lightweight Design and Structural Biomechanics, Vienna University of Technology, Vienna, Austria.
| | - The OStEO Group
- University Hospital Southampton NHS Foundation Trust, Southampton, UK; MRC Lifecourse Epidemiology Unit, University of Southampton, Southampton, UK; NIHR Musculoskeletal Biomedical Research Unit, University of Oxford, Oxford, UK; Portsmouth Hospitals NHS Trust, Portsmouth, UK; University College London, London, UK
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22
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Jenkins T, Alix J, Rao G, Hoggard N, O'Brien E, Baster K, Bradburn M, Bigley J, McDermott C, Wilkinson I, Shaw P. Imaging denervation in motor neuron disease for future clinical trials: a longitudinal cohort study. J Neurol Sci 2017. [DOI: 10.1016/j.jns.2017.08.328] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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23
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Jenkins T, Samuel R, Jafek A, Feng H, Gale B, Carrell D, Hotaling J. Rapid microfluidic sperm isolation from microtese samples in men with non-obstructive azoospermia. Fertil Steril 2017. [DOI: 10.1016/j.fertnstert.2017.07.733] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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24
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Martin L, Mullaney S, Peche W, Peterson K, Chan S, Morton R, Wan Y, Zhang C, Presson AP, Emery B, Aston K, Jenkins T, Carrell D, Hotaling J. Population-based Semen Analysis Results and Fertility Among Patients With Inflammatory Bowel Disease: Results From Subfertility Health Assisted Reproduction and the Environment (SHARE) Study. Urology 2017; 107:114-119. [DOI: 10.1016/j.urology.2017.06.029] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2017] [Revised: 06/01/2017] [Accepted: 06/19/2017] [Indexed: 12/18/2022]
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25
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26
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Gott PN, Stam A, Johns A, Miller BG, Bell B, Jenkins T, Murugesan GR. 039 Mycotoxin survey of common Bermudagrass in south-central Florida. J Anim Sci 2017. [DOI: 10.2527/asasann.2017.039] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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27
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Hendel EG, Gott PN, Murugesan GR, Jenkins T. 034 Survey of mycotoxins in United States corn distiller's dried grains with solubles. J Anim Sci 2017. [DOI: 10.2527/asasann.2017.034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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28
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29
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Kovalsky P, Kos G, Nährer K, Schwab C, Jenkins T, Schatzmayr G, Sulyok M, Krska R. Co-Occurrence of Regulated, Masked and Emerging Mycotoxins and Secondary Metabolites in Finished Feed and Maize-An Extensive Survey. Toxins (Basel) 2016; 8:E363. [PMID: 27929415 PMCID: PMC5198557 DOI: 10.3390/toxins8120363] [Citation(s) in RCA: 124] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2016] [Revised: 11/18/2016] [Accepted: 11/21/2016] [Indexed: 12/11/2022] Open
Abstract
Global trade of agricultural commodities (e.g., animal feed) requires monitoring for fungal toxins. Also, little is known about masked and emerging toxins and metabolites. 1926 samples from 52 countries were analysed for toxins and metabolites. Of 162 compounds detected, up to 68 metabolites were found in a single sample. A subset of 1113 finished feed, maize and maize silage samples containing 57 compounds from 2012 to 2015 from 44 countries was investigated using liquid chromatography and mass spectrometry. Deoxynivalenol (DON), zearalenone (ZEN) and fumonisins showed large increases of annual medians in Europe. Within a region, distinct trends were observed, suggesting importance of local meteorology and cultivars. In 2015, median DON concentrations increased to 1400 μ g·kg - 1 in Austria, but were stable in Germany at 350 μ g·kg - 1 . In 2014, enniatins occurred at median concentrations of 250 μ g·kg - 1 in Europe, at levels similar to DON and ZEN. The latter were frequently correlated with DON-3-glucoside and ZEN-14-sulfate. Co-occurrence of regulated toxins was frequent with e.g., enniatins, and moniliformin. Correlation was observed between DON and DON-3-glucoside and with beauvericin. Results indicate that considerably more than 25% of agricultural commodities could be contaminated with mycotoxins as suggested by FAO, although this is at least partly due to the lower limits of detection in the current survey. Observed contamination percentages ranged from 7.1 to 79% for B trichothecenes and 88% for ZEN.
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Affiliation(s)
| | - Gregor Kos
- Department of Atmospheric and Oceanic Sciences, McGill University, Montreal QC H3A 0B9, Canada.
| | | | | | | | | | - Michael Sulyok
- Department of Agrobiotechnology (IFA-Tulln), University of Natural Resources and Life Sciences, Vienna 1180, Austria.
| | - Rudolf Krska
- Department of Agrobiotechnology (IFA-Tulln), University of Natural Resources and Life Sciences, Vienna 1180, Austria.
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30
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Shihadeh K, Young H, Knepper B, Jenkins T. Impact of a Stool Multiplex Polymerase Chain Reaction Rapid Diagnostic Test on Antibiotic Prescribing in Patients Hospitalized With Diarrhea of Suspected Infectious Etiology. Open Forum Infect Dis 2016. [DOI: 10.1093/ofid/ofw172.80] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- Kati Shihadeh
- Acute Care Pharmacy, Denver Health Medical Center, Denver, Colorado
| | - Heather Young
- Infectious Diseases, Denver Health Medical Center, Denver, Colorado
| | - Bryan Knepper
- Patient Safety and Quality, Denver Health Medical Center, Denver, Colorado
| | - Timothy Jenkins
- Medicine/Infectious Diseases, University of Colorado-Denver Health Sciences Center, Denver, Colorado
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31
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Jenkins T, Hulett T, Barber G, Hodgson S, Knepper B, Wald H. Colorado's Statewide Antimicrobial Stewardship (AMS) Collaborative: Facilitating Syndrome-Specific Interventions for Skin and Soft Tissue Infection (SSTI) and Urinary Tract Infection (UTI). Open Forum Infect Dis 2016. [DOI: 10.1093/ofid/ofw194.102] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- Timothy Jenkins
- Medicine/Infectious Diseases, University of Colorado-Denver Health Sciences Center, Denver, Colorado
| | - Teresa Hulett
- Colorado Hospital Association, Greenwood Village, Colorado
| | | | - Sarah Hodgson
- Colorado Hospital Association, Greenwood Village, Colorado
| | - Bryan Knepper
- Patient Safety and Quality, Denver Health Medical Center, Denver, Colorado
| | - Heidi Wald
- University of Colorado School of Medicine, Aurora, Colorado
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32
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Wyatt S, Banahan T, Tang Y, Nadendla K, Szychowski J, Jenkins T. 40: Effect of radiofrequency endometrial ablation on dysmenorrhea. Am J Obstet Gynecol 2016. [DOI: 10.1016/j.ajog.2016.01.071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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33
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Shihadeh K, Knepper B, Young H, Jenkins T. Evaluation of a Pharmacy-Driven Vancomycin Protocol and Predictors of Supratherapeutic Vancomycin Troughs. Open Forum Infect Dis 2015. [DOI: 10.1093/ofid/ofv133.13] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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34
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Yogo N, Gahm G, Knepper B, Burman W, Mehler P, Jenkins T. Clinical Characteristics, Diagnostic Evaluation, and Antibiotic Prescribing Patterns for Skin and Soft Tissue Infections in Nursing Homes. Open Forum Infect Dis 2015. [DOI: 10.1093/ofid/ofv133.32] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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35
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Yogo N, Young H, Shihadeh K, Calcaterra S, Knepper B, Burman W, Mehler P, Jenkins T. Intervention to Improve Antibiotic Selection and Shorten Treatment Durations at the Time of Hospital Discharge. Open Forum Infect Dis 2015. [DOI: 10.1093/ofid/ofv131.64] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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36
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Doron S, Jenkins T, Haynes A, Lopes C, Zhu H, Goldwater S, Owens R. Patient Factors That Influence the Decision to Admit or Discharge Patients With Acute Bacterial Skin and Skin Structure Infections (ABSSSIs). Open Forum Infect Dis 2015. [DOI: 10.1093/ofid/ofv133.1089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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37
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Jenkins T, Coutts LV, Dunlop DG, Oreffo ROC, Cooper C, Harvey NC, Thurner PJ. Variability in reference point microindentation and recommendations for testing cortical bone: maximum load, sample orientation, mode of use, sample preparation and measurement spacing. J Mech Behav Biomed Mater 2015; 42:311-24. [PMID: 25455607 DOI: 10.1016/j.jmbbm.2014.09.030] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2014] [Revised: 09/19/2014] [Accepted: 09/27/2014] [Indexed: 10/24/2022]
Abstract
Reference Point Indentation (RPI) is a novel microindentation tool that has emerging clinical potential for the assessment of fracture risk as well as use as a laboratory tool for straight-forward mechanical characterisation of bone. Despite increasing use of the tool, little research is available to advise the set-up of testing protocols or optimisation of testing parameters. Here we consider five such parameters: maximum load, sample orientation, mode of use, sample preparation and measurement spacing, to investigate how they affect the Indentation Distance Increase (IDI), the most published measurement parameter associated with the RPI device. The RPI tool was applied to bovine bone; indenting in the proximal midshaft of five femora and human bone; indenting five femoral heads and five femoral neck samples. Based on the findings of these studies we recommend the following as the best practice. (1) Repeat measurements should be utilised to reduce the coefficient of variation (e.g. 8-15 repeats to achieve a 5-10% error, however the 3-5 measurements used here gives a 15-20% error). (2) IDI is dependent on maximum load (r=0.45 on the periosteal surface and r=0.94 on the machined surface, p<0.05), mode of use (i.e. comparing the device held freehand compared to fixed in its stand, p=0.04) and surface preparation (p=0.004) so these should be kept consistent throughout testing. Though sample orientation appears to have minimal influence on IDI (p>0.05), care should also be taken in combining measurements from different orientations. (3) The coefficient of variation is higher (p=0.04) when holding the device freehand, so it should ideally be kept supported in its stand. (4) Removing the periosteum (p=0.04) and machining the surface of the bone (p=0.08) reduces the coefficient of variation, so should be performed where practical. (5) There is a hyperbolic relationship between thickness and IDI (p<0.001) with a sample thickness 10 fold greater than the maximum indentation depth recommended, to ensure a representative measurement. (6) Measurement spacing does not appear to influence the IDI (p>0.05), so it can be as low as 500 µm. By following these recommendations, RPI users can minimise the potential confounding effects associated with the variables investigated here and reduce the coefficient of variation, hence achieving more consistent testing. This optimisation of the technique enhances both the clinical and laboratory potential of the tool.
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Affiliation(s)
- T Jenkins
- Bioengineering Science Research Group, Faculty of Engineering and the Environment, University of Southampton, Highfield, Southampton SO17 1BJ, UK
| | - L V Coutts
- Bioengineering Science Research Group, Faculty of Engineering and the Environment, University of Southampton, Highfield, Southampton SO17 1BJ, UK
| | - D G Dunlop
- University Hospital Southampton NHS Foundation Trust, Southampton, UK
| | - R O C Oreffo
- Bone and Joint Research Group, Centre for Human Development, Stem Cells and Regeneration, Institute for Development Sciences, Faculty of Medicine, University of Southampton, Southampton, UK
| | - C Cooper
- MRC Lifecourse Epidemiology Unit, University of Southampton, Southampton, UK; NIHR Musculoskeletal Biomedical Research Unit, University of Oxford, Oxford, UK; NIHR Biomedical Research Centre, University of Southampton and University Hospital Southampton NHS Foundation Trust, UK
| | - N C Harvey
- MRC Lifecourse Epidemiology Unit, University of Southampton, Southampton, UK; NIHR Biomedical Research Centre, University of Southampton and University Hospital Southampton NHS Foundation Trust, UK
| | - P J Thurner
- Bioengineering Science Research Group, Faculty of Engineering and the Environment, University of Southampton, Highfield, Southampton SO17 1BJ, UK; Institute for Lightweight Design and Structural Biomechanics, Vienna University of Technology, Gußhausstraße 27-29, 1040 Vienna, Austria.
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38
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Seymour R, Knepper B, Shihadeh K, Doody M, Haas M, Jenkins T. 231Using an Algorithm to Decrease Fluoroquinolone Use and Effects on Escherichia coli Resistance. Open Forum Infect Dis 2014. [DOI: 10.1093/ofid/ofu052.97] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Rebecca Seymour
- Acute Care Pharmacy, Denver Health Medical Center, Denver, CO
| | - Bryan Knepper
- Patient Safety and Quality, Denver Health Medical Center, Denver, CO
| | - Kati Shihadeh
- Acute Care Pharmacy, Denver Health Medical Center, Denver, CO
| | - Mike Doody
- Acute Care Pharmacy, Denver Health Medical Center, Denver, CO
| | - Michelle Haas
- Medicine/Infectious Diseases, University of Colorado-Denver Health Sciences Center, Denver, CO
| | - Timothy Jenkins
- Medicine/Infectious Diseases, University of Colorado-Denver Health Sciences Center, Denver, CO
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39
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Yogo N, Haas M, Knepper B, Burman W, Mehler P, Jenkins T. 233Antibiotic Prescribing at the Time of Hospital Discharge: a Target for Antibiotic Stewardship. Open Forum Infect Dis 2014. [DOI: 10.1093/ofid/ofu052.99] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Norihiro Yogo
- Infectious Diseases, University of Colorado, Aurora, CO
| | - Michelle Haas
- Medicine/Infectious Diseases, University of Colorado-Denver Health Sciences Center, Denver, CO
| | | | | | | | - Timothy Jenkins
- Medicine/Infectious Diseases, University of Colorado-Denver Health Sciences Center, Denver, CO
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40
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Shihadeh K, Haas M, Mehler P, Eustaquio M, Jenkins T. 209Results of an Antimicrobial Stewardship Intervention Involving Surgical Subspecialty Patients. Open Forum Infect Dis 2014. [PMCID: PMC5781766 DOI: 10.1093/ofid/ofu052.75] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Affiliation(s)
- Kati Shihadeh
- University of Colorado Skagg's School of Pharmacy and Pharmaceutical Sciences, Aurora, CO
- Acute Care Pharmacy, Denver Health Medical Center, Denver, CO
| | - Michelle Haas
- Medicine/Infectious Diseases, Denver Health Medical Center, Denver, CO
- Medicine/Infectious Diseases, University of Colorado-Denver Health Sciences Center, Denver, CO
| | | | - Marcia Eustaquio
- Otolaryngology - Head and Neck Surgery, Denver Health Medical Center, Denver, CO
| | - Timothy Jenkins
- Medicine/Infectious Diseases, Denver Health Medical Center, Denver, CO
- Medicine/Infectious Diseases, University of Colorado-Denver Health Sciences Center, Denver, CO
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41
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Young H, Heard S, Price CS, Jenkins T, Knepper B. 926What Impacts the Decision to Obtain Transesophageal Echocardiogram for Staphylococcus aureus Bacteremia? Open Forum Infect Dis 2014. [DOI: 10.1093/ofid/ofu052.634] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
| | - Susan Heard
- Rocky Mountain Poison and Drug Center, Denver, CO
| | - Connie S. Price
- Department of Medicine, Division of Infectious Diseases, Denver Health Medical Center, Denver, CO
| | - Timothy Jenkins
- Medicine/Infectious Diseases, University of Colorado-Denver Health Sciences Center, Denver, CO
| | - Bryan Knepper
- Patient Safety and Quality, Denver Health Medical Center, Denver, CO
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42
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Castillo-Lopez E, Ramirez Ramirez H, Klopfenstein TJ, Anderson CL, Aluthge ND, Fernando SC, Jenkins T, Kononoff PJ. Effect of feeding dried distillers grains with solubles on ruminal biohydrogenation, intestinal fatty acid profile, and gut microbial diversity evaluated through DNA pyro-sequencing. J Anim Sci 2014; 92:733-43. [DOI: 10.2527/jas.2013-7223] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Affiliation(s)
- E. Castillo-Lopez
- Department of Animal Science, University of Nebraska-Lincoln, Lincoln 68583-0908
| | - H.A. Ramirez Ramirez
- Department of Animal Science, University of Nebraska-Lincoln, Lincoln 68583-0908
| | - T. J. Klopfenstein
- Department of Animal Science, University of Nebraska-Lincoln, Lincoln 68583-0908
| | - C. L. Anderson
- Department of Animal Science, University of Nebraska-Lincoln, Lincoln 68583-0908
| | - N. D. Aluthge
- Department of Animal Science, University of Nebraska-Lincoln, Lincoln 68583-0908
| | - S. C. Fernando
- Department of Animal Science, University of Nebraska-Lincoln, Lincoln 68583-0908
| | - T. Jenkins
- Department of Animal & Veterinary Sciences, Clemson University, Clemson, SC 29634
| | - P. J. Kononoff
- Department of Animal Science, University of Nebraska-Lincoln, Lincoln 68583-0908
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43
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Cheung AS, Pattison D, Bretherton I, Hoermann R, Lim Joon D, Ho E, Jenkins T, Hamilton EJ, Bate K, Chan I, Zajac JD, Grossmann M. Cardiovascular risk and bone loss in men undergoing androgen deprivation therapy for non-metastatic prostate cancer: implementation of standardized management guidelines. Andrology 2013; 1:583-9. [PMID: 23686896 DOI: 10.1111/j.2047-2927.2013.00093.x] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2013] [Revised: 03/22/2013] [Accepted: 04/02/2013] [Indexed: 11/30/2022]
Abstract
Our objective was to evaluate the effectiveness of implementing standardized guidelines to mitigate metabolic and bone side effects of androgen deprivation therapy (ADT) in men with non-metastatic prostate cancer. We conducted a 2-year prospective cohort study at a tertiary referral teaching hospital. Overall, 236 men (mean age 69.8 ± 7.1) commencing ADT for non-metastatic prostate cancer attended a baseline clinic visit between 2007 and 2011, and 153 men were eligible for follow-up after 2 years of continuous ADT. Of these, 113 men had data available for analysis at 2 years. At baseline, 87% of the men were overweight or obese, 61% had hypertension, 56% had hypercholesterolaemia, 27% prior cardiovascular disease, 11% osteoporosis and 40% osteopaenia. After 2 years of ADT, there was an increase in waist circumference (+2.8 ± 6.3 cm, p = 0.002), and, in men without diabetes, in HbA1c (+0.13 ± 0.34%, p = 0.019). Despite this, due to treatment, there were significant reductions in total cholesterol (-0.35 ± 1.00 mmol/L, p < 0.001), and blood pressure (systolic -7.6 ± 19.3 mmHg; diastolic -4.7 ± 11.6 mmHg, p < 0.001). After 2 years, men not receiving anti-resorptive therapy experienced a significant decline in lumbar spine (-0.042 ± 0.134 g/cm(2) , p = 0.012) and total hip bone mineral density (BMD) (-0.026 ± 0.036 g/cm(2) , p < 0.001), whereas bisphosphonate treatment maintained stable BMD. Prevalence of anaemia increased from 13.8 to 32.5%. Older age independently predicted a greater drop in haemoglobin (p = 0.005). We conclude that a structured approach to assess and treat men undergoing ADT effectively improves cardiovascular risk factors and prevents bone decay. Larger studies are needed to determine effects on cardiovascular outcomes, fracture prevention and survival.
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Affiliation(s)
- A S Cheung
- Department of Medicine Austin Health, The University of Melbourne, Heidelberg, Vic., Australia
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Abstract
Obesity is no longer just an adult disease. An increasing number of youth are overweight, defined as body mass index (BMI) at or greater than the 95th percentile for age (1). Between 2009 and 2010, 16.9% of children aged 2–19 yr were classified as overweight based on BMI (2), as compared with only 5% of children affected by obesity in 1976–1980 (3). This is a problem of enormous proportion from a public health standpoint, as without intervention these children will grow up to become overweight and obese adults. For an obese child, the risk of becoming an obese adult may be as high as 77%, compared with 7%for a child of healthy weight (4). Morbid obesity is a major risk factor for later complications such as cardiovascular disease, type 2 diabetes, obstructive sleep apnea (OSA), polycystic ovary syndrome (PCOS), and degenerative joint disease (4–10). Obesity is also an expensive problem: the US government spends $147 billion yearly on obesity-related healthcare costs (11). Thus, there is an urgent need to target obesity in the pediatric population, before the expensive and life-threatening consequences of obesity manifest. Unfortunately, the effectiveness of medical treatments for obesity is limited. Behaviorally based dietary and physical activity interventions offer little benefit for pediatric obesity, while pharmacologic therapy is also limited and carries low success rates and recidivism (12–14) (Table 1).
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Affiliation(s)
- M A Stefater
- Division of Pediatric and Thoracic Surgery, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA
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46
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Daniel R, van Dijk J, Jenkins T, Akca A, Mearns R, Williams DJL. Composite faecal egg count reduction test to detect resistance to triclabendazole in Fasciola hepatica. Vet Rec 2012; 171:153, 1-5. [DOI: 10.1136/vr.100588] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- R. Daniel
- Animal Health and Veterinary Laboratories Agency (AHVLA) Carmarthen; Job's Well Road, Johnstown Carmarthen SA31 3EZ UK
| | - J. van Dijk
- Department of Epidemiology and Population Health; Institute of Infection and Global Health, Leahurst; Chester High Road Neston Cheshire CH64 7TE UK
| | - T. Jenkins
- Department of Parasitology; Faculty of Veterinary Medicine; University of Kafkas; Kars 36040 Turkey
| | - A. Akca
- Animal Health and Veterinary Laboratories Agency (AHVLA); Penrith Investigation Centre and Laboratory; Calthwaite Penrith Cumbria CA11 9RR UK
| | - R. Mearns
- Veterinary Parasitology; Institute of Infection and Global Health; University of Liverpool; Pembroke Place Liverpool L69 7ZJ UK
| | - D. J. L. Williams
- Animal Health and Veterinary Laboratories Agency (AHVLA) Carmarthen; Job's Well Road, Johnstown Carmarthen SA31 3EZ UK
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Harrison J, White R, Kincaid R, Block E, Jenkins T, St-Pierre N. Effectiveness of potassium carbonate sesquihydrate to increase dietary cation-anion difference in early lactation cows. J Dairy Sci 2012; 95:3919-25. [DOI: 10.3168/jds.2011-4840] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2011] [Accepted: 03/02/2012] [Indexed: 11/19/2022]
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48
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Toppozini L, Armstrong CL, Kaye MD, Tyagi M, Jenkins T, Rheinstädter MC. Hydration Water Freezing in Single Supported Lipid Bilayers. ACTA ACUST UNITED AC 2012. [DOI: 10.5402/2012/520307] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
We present a high-temperature and high-energy resolution neutron scattering investigation of hydration water freezing in single supported lipid bilayers. Single supported lipid bilayers provide a well-defined biological interface to study hydration water dynamics and coupling to membrane degrees of freedom. Nanosecond molecular motions of membrane and hydration water were studied in the temperature range 240 K < T < 290 K in slow heating and cooling cycles using coherent and incoherent elastic neutron scattering on a backscattering spectrometer. Several freezing and melting transitions were observed. From the length scale dependence of the elastic scattering, these transitions could be assigned to freezing and melting of hydration water dynamics, diffusive lipid, and lipid acyl-tail dynamics. Coupling was investigated by comparing the different freezing and melting temperatures. While it is often speculated that membrane and hydration water dynamics are strongly coupled, we find that membrane and hydration water dynamics are at least partially decoupled in single bilayers.
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Affiliation(s)
- Laura Toppozini
- Department of Physics & Astronomy, McMaster University, 1280 Main Street West, Hamilton, ON, Canada L8S 4M1
| | - Clare L. Armstrong
- Department of Physics & Astronomy, McMaster University, 1280 Main Street West, Hamilton, ON, Canada L8S 4M1
| | - Martin D. Kaye
- Department of Physics & Astronomy, McMaster University, 1280 Main Street West, Hamilton, ON, Canada L8S 4M1
| | - Madhusudan Tyagi
- NIST Center for Neutron Research, NIST, Gaithersburg, MD 20899, USA
- Department of Materials Science and Engineering, University of Maryland, College Park, MD 20742, USA
| | - Timothy Jenkins
- NIST Center for Neutron Research, NIST, Gaithersburg, MD 20899, USA
| | - Maikel C. Rheinstädter
- Department of Physics & Astronomy, McMaster University, 1280 Main Street West, Hamilton, ON, Canada L8S 4M1
- Canadian Neutron Beam Centre, National Research Council Canada, Chalk River, ON, Canada K0J 1J0
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Jenkins T, Sharrack BS. 027 The cost of long neurology inpatient stays. J Neurol Neurosurg Psychiatry 2012. [DOI: 10.1136/jnnp-2011-301993.69] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Omar M, Stevens P, Jenkins T, Morris K, Hussain H, Evans A. Retrospective comparison study of warfarinised trauma patients and an age-matched control group of nonwarfarinised patients. Crit Care 2012. [PMCID: PMC3363852 DOI: 10.1186/cc11041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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