Site-specific recognition of SARS-CoV-2 nsp1 protein with a tailored titanium dioxide nanoparticle

The ongoing world-wide Severe Acute Respiratory Syndrome coronavirus 2 (SARS-CoV-2) pandemic shows the need for new sensing and therapeutic means against the CoV viruses. The SARS-CoV-2 nsp1 protein is important, both for replication and pathogenesis, making it an attractive target for intervention. In recent years nanoparticles have been shown to interact with peptides, ranging in size from single amino acids up to proteins. These nanoparticles can be tailor-made with specific functions and properties including bioavailability. To the best of our knowledge, in this study we show for the first time that a tailored titanium oxide nanoparticle interacts specifically with a unique site of the full-length SARS-CoV-2 nsp1 protein. This can be developed potentially into a tool for selective control of viral protein functions.

Note: High resolution alternating current/direct current Harman technique

This note describes the construction and engineering of a high precision Harman set-up for metrology of the thermoelectric figure of merit (ZT) of modules and materials based on steady state AC and DC measurements. The Harman technique presented in this article has a resolution of milli-ZT and it does not employ lock-in amplifiers or AC bridges; rather, the technique is developed to avoid typical complications experienced in AC Harman systems. By one-time reference measurements the best operation point for the system is chosen, minimizing the effects of capacitive loads due to AC signals.

A new thermoelectric concept using large area PN junctions

A new thermoelectric concept using large area silicon PN junctions is experimentally demonstrated. In contrast to conventional thermoelectric generators where the n-type and p-type semiconductors are connected electrically in series and thermally in parallel, we demonstrate a large area PN junction made from densified silicon nanoparticles that combines thermally induced charge generation and separation in a space charge region with the conventional Seebeck effect by applying a temperature gradient parallel to the PN junction. In the proposed concept, the electrical contacts are made at the cold side eliminating the need for contacts at the hot side allowing temperature gradients greater than 100K to be applied. The investigated PN junction devices are produced by stacking n-type and p-type nanopowder prior to a densification process. The nanoparticulate nature of the densified PN junction lowers thermal conductivity and increases the intraband traps density which we propose is beneficial for transport across the PN junction thus enhancing the thermoelectric properties. A fundamental working principle of the proposed concept is suggested, along with characterization of power output and output voltages per temperature difference that are close to those one would expect from a conventional thermoelectric generator.

[Peptic diseases]

The therapeutical acquisitions of the year 2004 are: 1. The sequential treatment of the Helicobacter pylori infection reaches an eradication rate of 95%. 2. The use of COX-2 inhibitors reduced significantly the gastrointestinal side effects of anti-inflammatory treatments. Since cardiac averse effects of certain COX-2 inhibitors had been reported, the treatments with COX-2 inhibitors came widely into question. In the case of patients with risk of NSAID induced gastrointestinal toxicity, the alternative is to return to a treatment with non specific NSAID associated to an prophylactic PPI treatment.

[Medicinal iatrogenics in hospitals. A survey on a given day]

OBJECTIVE

Medicinal iatrogenics are responsible for hospital admissions but also occur in hospitals. In view of the lack of knowledge, prevalence and nature of the adverse drug-related events (ADE) in the Bichat-Claude Bernard hospital group in Paris, and because of the potential severity of the latter, the Local drug committee has decided to develop a policy to manage these risks.

METHOD

The first stage consisted in a transversal study on a given day in the departments in which patients are hospitalised for more than 24 hours, in order to assess the prevalence, severity and preventability of ADE and to search for factors of risk.

RESULTS

107 ADE were observed in 89 patients on the day of the survey (9.9% global prevalence of ADE [CI 95%: 8.8% - 11.0%]). Among the latter, 57 patients had exhibited at least one adverse event during their hospitalisation, i.e., a prevalence of 6.3% ([CI 95%: 4.7% - 7.9%] ). Two thirds of these patients were hospitalised in medical departments. These nosocomial ADE (nosocomial adverse drug events) were serious or severe in 73% of cases and 25% could have been avoided. The only clearly identified risk factor was the number of drugs prescribed.

CONCLUSION

This review has drawn the attention of the medical and paramedical community to the need to define vigilance markers, and has provided some elements of response that should be further completed by a prospective cohort study.

Structure of the dimethyl sulfoxide solvated thallium(III) ion in solution and in the solid state

The structure and vibrational spectra of the dimethyl sulfoxide solvated thallium(III) ion have been studied in a dimethyl sulfoxide solution and in the solid state. X-ray crystallography shows a trigonal unit cell, space group R(-)3 (No. 148), for the [Tl(dmso)(6)](ClO(4))(3) compound with Z = 3, a = b = 11.9764(13) [11.8995(9)] A, c = 20.802(2) [20.467(2)] A, and V = 2584.0(5) [2509.9(4)] A(3) at 295 [150] K. The crystal structure comprises a highly symmetric hexakis(dimethyl sulfoxide)thallium(III) ion, with thallium in a (-)3 symmetry site and a Tl-O bond distance of 2.224(3) A at 295 K. The octahedral TlO(6) kernel is compressed along the threefold axis with an O-Tl-O bond angle of 96.20(11) degrees. The Tl-O-S bond angle of 120.7(2) degrees corresponds to a Tl.S distance of 3.292(2) A. One perchlorate ion centered on the (-)3 axis was described by a statistically disordered model. A low-temperature EXAFS study (10 K) resulted in the Tl-O and Tl.S distances of 2.221(4) and 3.282(6) A, respectively, consistent with a Tl-O-S bond angle of 120(1) degrees. The low Debye-Waller factors confirm a regular coordination without the disorder of the dimethyl sulfoxide ligands, which would have resulted from the alternative choice of space group R3 for the crystal structure. Raman and infrared spectra have been recorded and assigned, with the bands at 435 and 447 cm(-)(1) corresponding to the vibrational frequency of the symmetric and asymmetric Tl-O stretching modes, respectively. EXAFS data of a 0.5 mol dm(-3)thallium(III) trifluoromethanesulfonate in a dimethyl sulfoxide solution were consistent with that of a hexasolvated ion with mean Tl-O and Tl.S distances of 2.22(1) and 3.33(2) A, respectively, which correspond to a mean Tl-O-S bond angle of 124(2) degrees. The anomalously large disorder parameter for the Tl-O distances is consistent with a weak pseudo-Jahn-Teller effect. The (205)Tl, (13)C, and (1)H NMR spectra of the complex in solution show single signals at 1886, 39.5, and 2.3 ppm, respectively.

Respiratory system inertance: investigation in a physical inertance model

For analysis of respiratory system mechanics the very complex structure of the respiratory system is strongly simplified to a simple resistance-compliance-model. While for most patients this simplification seems sufficient, in patients with pulmonary disease this model is inappropriate. Additionally, to regional inhomogeneity throughout the lung, large volume accelerations due to the strongly decreased respiratory system compliance together with a mass increase of the patients' lungs, i.e. an increased respiratory system inertance Irs, result in a significant inertive pressure contribution. The aim of this study was to develop a physical inertance model, and its description by conventional methods of respiratory monitoring. Its parameters are adjustable within the physiological range, with Irs between 0.06 and 0.2 mbar.s2.l-1. The model proved well with static and dynamic analysis of respiratory system parameters. Using our physical model it is possible to evaluate new methods of respiratory monitoring and to investigate experimentally the interrelationship of respiratory system parameters.

Is pulmonary resistance constant, within the range of tidal volume ventilation, in patients with ARDS?

When managing patients with acute respiratory distress syndrome (ARDS), respiratory system compliance is usually considered first and changes in resistance, although recognized, are neglected. Resistance can change considerably between minimum and maximum lung volume, but is generally assumed to be constant in the tidal volume range (V(T)). We measured resistance during tidal ventilation in 16 patients with ARDS or acute lung injury by the slice method and multiple linear regression analysis. Resistance was constant within V(T) in only six of 16 patients. In the remaining patients, resistance decreased, increased or showed complex changes. We conclude that resistance within V(T) varies considerably from patient to patient and that constant resistance within V(T) is not always likely.

Dynamic respiratory system mechanics in infants during pressure and volume controlled ventilation

Dynamic respiratory system mechanics can be determined using multiple linear regression (MLR) analysis. There is no need for a particular ventilator setting or for a special ventilatory manoeuvre. The purpose of this study was to investigate whether or not different ventilator modes and the flow-dependent resistance of the endotracheal tube (ETT) influence the determination of resistance and compliance by MLR. Ten paediatric patients who were on controlled mechanical ventilation for various disorders were investigated. The ventilator modes were changed between pressure control (PC) and volume control (VC). Flow and airway pressure were measured and tracheal pressure was continuously calculated. Each mode was applied for 3 min, and 10 consecutive breaths at the end of each period were analysed. Respiratory mechanics were determined by MLR based on either airway pressure, thus including the resistance of the ETT, or tracheal pressure. Resistance was found to be slightly higher in PC than in VC. There was no effect on determination of compliance between the different modes. Elimination of the flow-dependent resistance of the ETT preserved the differences between the modes. The authors conclude that using multiple linear regression compliance is not affected by the actual ventilator mode, whereas resistance is.

Compliance is nonlinear over tidal volume irrespective of positive end-expiratory pressure level in surfactant-depleted piglets

Between the lower and the upper inflection point of a quasistatic pressure-volume (PV) curve, a segment usually appears in which the PV relationship is steep and linear (i.e., compliance is high, with maximal volume change per pressure change, and is constant). Traditionally it is assumed that when positive end-expiratory pressure (PEEP) and tidal volume (V T) are titrated such that the end-inspiratory volume is positioned at this linear segment of the PV curve, compliance is constant over VT during ongoing ventilation. The validity of this assumption was addressed in this study. In 14 surfactant-deficient piglets, PEEP was increased from 3 cm H(2)O to 24 cm H(2)O, and the compliance associated with 10 consecutive volume increments up to full VT was determined with a modified multiple-occlusion method at the different PEEP levels. With PEEP at approximately the lower inflection point, compliance was minimal in most lungs and decreased markedly over VT, indicating overdistension. Compliance both increased and decreased within the same breath at intermediate PEEP levels. It is concluded that a PEEP that results in constant compliance over the full VT range is difficult to find, and cannot be derived from conventional respiratory-mechanical analyses; nor does this PEEP level coincide with maximal gas exchange.

Static versus dynamic respiratory mechanics for setting the ventilator

The lower inflection point (LIP) of the inspiratory limb of a static pressure-volume (PV) loop is assumed to indicate the pressure at which most lung units are recruited. The LIP is determined by a static manoeuvre with a PV-history that is different from the PV-history of the actual ventilation. In nine surfactant-deficient piglets, information to allow setting PEEP and VT was obtained, both from the PV-curve and also during ongoing ventilation from the dynamic compliance relationship. According to LIP, PEEP was set at 20 (95% confidence interval 17-22) cm H2O. Volume-dependent dynamic compliance suggested a PEEP reduction (to 15 (13-18) cm H2O). Pulmonary gas exchange remained satisfactory and this change resulted in reduced mechanical stress on the respiratory system, indirectly indicated by volume-dependent compliance being consistently great during the entire inspiration.

Analysis of nonlinear volume-dependent respiratory system mechanics in pediatric patients

OBJECTIVE

Analysis of dynamic respiratory system mechanics is generally based on a resistance-compliance model in which nonlinearities of the respiratory mechanics indices are not considered. The recently developed SLICE method analyzing consecutive volume slices of the tidal volume was used for determination of non-linear volume-dependent respiratory system mechanics. Volume-dependent compliance C(Slice) and resistance R(Slice) were compared with C(MLR) and R(MLR) obtained by standard multiple linear regression analysis (MLR).

DESIGN

Prospective observational study.

SETTING

Pediatric intensive care unit in a university hospital.

PATIENTS

Fifteen pediatric patients, aged 24 days to 9.6 yrs, weighing 3-67.5 kg.

INTERVENTIONS

None.

MEASUREMENTS AND MAIN RESULTS

With respect to their pulmonary status, the patients were grouped into three clinical groups: patients with no lung diseases, patients with restrictive lung diseases, and patients with obstructive lung diseases. All patients were mechanically ventilated via a cuffed endotracheal tube in the pressure-controlled mode. Flow and airway pressure were measured at the proximal end of the tube and tracheal pressure was continuously calculated. Respiratory mechanics were determined either with the SLICE method or, as reference, by using standard MLR. In most patients, the pressure-volume relationship was nonlinear, particularly in patients with restrictive and obstructive lung diseases. In the presence of considerable nonlinearity, the volume-dependent respiratory mechanics indices obtained by the SLICE method showed better agreement between recalculated and original pressure-volume loops compared with the MLR results. Furthermore, signs of overdistension of the patient's lung became obvious when using the SLICE method, whereas they were undetected by MLR.

CONCLUSIONS

The SLICE method is well suited for the analysis of nonlinear volume-dependent respiratory system mechanics in pediatric patients. The SLICE method may be used as a first step toward an adaptation of ventilator settings with respect to the actual mechanical status of the patient's respiratory system, and, to prevent pulmonary overdistension.

Continuous calculation of intratracheal pressure in the presence of pediatric endotracheal tubes

OBJECTIVE

To measure the pressure-flow relationship of pediatric endotracheal tubes (ETTs) in trachea models, to mathematically describe this relationship, and to evaluate in trachea/lung models a method for calculation of pressure at the distal end of the ETT (Ptrach) by subtracting the flow-dependent pressure drop across the ETT from the airway pressure measured at the proximal end of the ETT.

DESIGN

Trachea models and trachea/lung models.

SETTING

Research laboratory in a university medical center.

INTERVENTIONS

The pressure-flow relationship of pediatric ETTs (inner diameter, 2.5-6.5 mm) was determined using a physical model consisting of a tube connector, an anatomically curved ETT, and an artificial trachea. The model was ventilated with sinusoidal gas flow (12-60 cycles/min). The coefficients of an approximation equation considering ETT resistance and inertance were fitted separately to the measured pressure-flow curves for inspiration and expiration. Calculated Ptrach was compared with directly measured Ptrach in mechanically ventilated physical trachea/lung models.

MEASUREMENTS AND MAIN RESULTS

The pressure-flow relationship was considerably nonlinear and showed hysteresis around the origin caused by the inertia of accelerated gas. ETT inertance ranged from 0.1 to 0.4 cm H2O/L x sec2 (inner diameter, 6-2.5 mm). The abrupt change in cross-sectional area at the tube connector caused an inspiration-to-expiration asymmetry. Calculated and measured Ptrach were within +/- 1 cm H2O. Correspondence between measured and calculated Ptrach is improved even further when the ETT inertance is taken into account.

CONCLUSIONS

Ptrach can continuously be monitored in the presence of pediatric ETT by combining ETT coefficients and the flow and airway pressure continuously measured at the proximal end of the ETT.

Volume-dependent compliance in ARDS: proposal of a new diagnostic concept

OBJECTIVE

Adaptation of ventilator settings to the individual's respiratory system mechanics requires information about the pressure-volume relationship and the change of compliance which is dependent on inflated volume. Unfortunately, established methods of obtaining this information are invasive and time-consuming, and, therefore, not well suited for clinical routine. We propose a new standardized diagnostic concept based on the recently developed slice method. This multiple linear regression method (MLR) determines volume-dependent respiratory system compliance (C(SLICE)) within the tidal volume (V(T)) during ongoing mechanical ventilation. The impact of a ventilator strategy, recommended by a consensus conference, on the course of compliance within V(T) was investigated in patients with the acute respiratory distress syndrome (ARDS) or acute lung injury (ALI).

DESIGN

Prospective observational study.

SETTING

Intensive care unit of a university hospital.

PATIENTS

14 ARDS patients, 2 patients with ALI.

INTERVENTIONS

None.

MEASUREMENTS AND RESULTS

After measurement of flow and airway pressure and calculation of tracheal pressure, C(SLICE) was determined. The resulting course of C(SLICE) within V(T) was estimated using a mathematical algorithm. C(SLICE) data were compared to those obtained by standard MLR. We found decreasing C(SLICE) mainly in the upper part of V(T) in all patients. In 7 patients, we found an additional increasing C(SLICE) mainly in the lower part of V(T).

CONCLUSIONS

C(SLICE) was not constant in patients with ARDS/ALI whose lungs were ventilated according to consensus conference recommendations. The proposed diagnostic concept may serve as a new tool to obtain a standardized estimation of respiratory system compliance within V(T) non-invasively without interfering with ongoing mechanical ventilation.

Interrupter airway and tissue resistance: errors caused by valve properties and respiratory system compliance

The interrupter technique is used to determine airway and tissue resistance. Their accuracy is influenced by the technical properties of the interrupter device and the compliance of the respiratory system. We investigated the influence of valve characteristics and respiratory system compliance on the accuracy of determining airway and tissue resistance by means of a computer simulation. With decreasing compliance we found increasing errors in both airway and tissue resistance determination of up to 34 and 71%, respectively. On this basis we developed a new occlusion valve, with special emphasis on rapid closing time and tightness in the closed state to improve the accuracy of resistance determination. The newly developed occlusion device greatly improves the accuracy of airway and tissue resistance determination. We conclude that respiratory system compliance is a limiting factor for the accuracy of the interrupter technique. To apply the interrupter technique in patients with extremely low respiratory system compliances, we need sophisticated technical devices.

The Traveling Shutter Wave analyses non-linear compliance during mechanical ventilation

Mechanical ventilation is an important, often life-saving component of modern intensive care medicine. However, it may further aggravate pulmonary pathology by endinspiratory overdistension of the alveoli or by their endexpiratory collapse. To prevent both the ventilator may be adjusted based on the slope of the pressure-volume curve, named as compliance, which is often determined by a stepwise inflation of the lungs. This maneuver gained no widespread clinical acceptance because of being cumbersome and invasive. Therefore, we developed a modification of the well known interrupter technique - the Traveling Shutter Wave. A wave of short-term (300 ms) occlusions "travels" over the tidal volume range. Differential compliance is calculated by division of volume and pressure differences between two adjacent occlusion maneuvers. The technique is well suited for the clinical setting because the ventilatory pattern does not need to be changed. This manuscript describes the realization of the Traveling Shutter Wave as well as its application in two patients.

Detection of endotracheal tube obstruction by analysis of the expiratory flow signal

OBJECTIVE

Acute obstruction of endotracheal tubes (ETT) increases airway pressure, decreases tidal volume, increases the risk of dynamic hyperinflation by prolonging the duration of passive expiration, and prevents reliable calculation of tracheal pressure. We propose a computer-assisted method for detecting ETT obstruction during controlled mechanical ventilation. The method only requires measurement of the expiratory flow.

DESIGN

Computer simulation; prospective study in two cases; retrospective study in one case and in seven patients with the adult respiratory distress syndrome (ARDS).

SETTING

Laboratory of the Section of Experimental Anaesthesiology (University of Freiburg); surgical adult intensive care units in a university hospital (University of Basel) and in a university affiliated hospital (Zentralklinikum Augsburg).

PATIENTS

3 patients with partial ETT or bronchial obstructions and 7 ARDS patients.

MEASUREMENTS AND RESULTS

Expiratory flow was measured using a pneumotachograph and integrated to obtain expiratory volume. The time-constant of passive expiration (tauE) as a function of expired volume [tauE(V(E)) function] was calculated from the expiratory volume/flow curve. We investigated the tauE(V(E)) function of data obtained from: (1) computer simulation of mechanically ventilated homogeneous and inhomogeneous lungs intubated with ETTs of different sizes; (2) one patient with an artificial ETT obstruction of 7.5 and 25% of the cross-sectional area of the ETT (case 1); (3) one patient with ETT obstruction due to secretions (case 2); (4) one patient with acute bronchial constriction (case 3); (5) seven ARDS patients who showed an increase in airway resistance of more than 2 cm H2O x s/l. It was found that an ETT obstruction caused an increase in tauE in early expiration (at high flow), whereas tauE in late expiration was virtually unchanged. The reason for this is the flow dependency of the increase in ETT resistance produced by ETT obstruction. Unlike ETT obstruction, an increase in pure airway resistance produced an increase in tauE throughout expiration.

CONCLUSIONS

An ETT obstruction can be reliably distinguished from an increase in pure airway resistance by a characteristic pattern change in the tauE(V(E)) function, which can be detected easily even by an automated pattern recognition system.

Serum alpha-fetoprotein: changes associated with acute and chronic ethanol ingestion in the resting and regenerating rat liver

The effect of acute and chronic ethanol consumption on serum alpha-fetoprotein was studied in adult male rats with resting and regenerating livers. Unlike many hepatotoxins, ethanol consumed over both the long and short term suppressed serum alpha-fetoprotein concentrations (p less than 0.05). This suppression was not due to increased degradation, since the half-life of alpha-fetoprotein was not significantly altered by chronic ethanol treatment. However, liver cytosolic alpha-fetoprotein was markedly increased after ethanol consumption, suggesting the presence of impaired secretion or mobilization from the liver cells. During liver regeneration following partial hepatectomy, alpha-fetoprotein increased in both the control (390 ng-hr/ml) and ethanol-treated animals (288 ng-hr/ml). At no time did the ethanol animal values equal the control levels. The change in serum alpha-fetoprotein showed an inverse exponential correlation with the amount of liver removed at hepatectomy and a positive correlation with the amount of nuclear DNA present at sacrifice. However, in the ethanol-treated animals it required the removal of 1.9 times as much liver to stimulate the same degree of liver regeneration as in the controls (p less than 0.001). A significant inverse correlation was observed between 3H-thymidine uptake and the areas under the alpha-fetoprotein time curves in the controls (p less than 0.001). In the ethanol groups the correlation was not statistically significant (p less than 0.2). It is concluded that although changes in serum alpha-fetoprotein may be associated with liver injury and regeneration, they are not a direct result of the regenerative process. The direct correlation with available nuclear DNA indicates the need for existing cells to hypertrophy and produce the alpha-fetoprotein. The depression associated with acute and chronic ethanol ingestion appears to reflect a direct effect of ethanol on protein synthesis and/or release.