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Yilmaz MT, İspirli H, Taylan O, Taşdemir V, Sagdic O, Dertli E. Characterisation and functional roles of a highly branched dextran produced by a bee pollen isolate Leuconostoc mesenteroides BI-20. FOOD BIOSCI 2022. [DOI: 10.1016/j.fbio.2021.101330] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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Taşdemir V. Synthesis of imidazo-1,4-oxazinone derivatives and investigation of reaction mechanism. Turk J Chem 2021; 45:1639-1649. [PMID: 34849073 PMCID: PMC8596553 DOI: 10.3906/kim-2106-28] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Accepted: 08/02/2021] [Indexed: 11/18/2022] Open
Abstract
In this study, nine different C-2 aroyl imidazole derivatives were synthesized in a one pot reaction with two steps, and the reduction reactions of these derivatives with NaBH4 were carried out under mild conditions. Substitution reaction of obtained imidazo methanol derivatives with chloroacetylchloride reagent and ring reaction of substitution products were investigated. It was determined that 1,4-imidazoxazinone derivative was obtained as a result of the cyclization reaction. The intermediate products obtained during the cyclization reaction were isolated, and the path of the reaction under different conditions was discussed.
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Affiliation(s)
- Volkan Taşdemir
- Muradiye Vocational School, Van Yüzüncü Yıl University, Van Turkey
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Taşdemir V, Menges N. Cover Feature: Gold‐catalyzed Cyclization of Non‐conjugated Ynone‐oxime Derivatives: Incorporation of Solvent Molecule (Asian J. Org. Chem. 12/2020). ASIAN J ORG CHEM 2020. [DOI: 10.1002/ajoc.202000547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Volkan Taşdemir
- Science Research and Applied Center Van Yüzüncü Yil University 65080 Van Turkey
| | - Nurettin Menges
- Pharmaceutical Chemistry Section Van Yüzüncü Yil University 65080 Van Turkey
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Affiliation(s)
- Volkan Taşdemir
- Science Research and Applied Center Van Yüzüncü Yil University 65080 Van Turkey
| | - Nurettin Menges
- Pharmaceutical Chemistry Section Van Yüzüncü Yil University 65080 Van Turkey
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Taşdemir V, Kalay E, Dertli E, Şahin E. Bio-catalytic asymmetric synthesis of β-adrenergic receptor blocker precursor: (R)-2-bromo-1-(naphthalen-2-yl)ethanol. BIOCATAL BIOTRANSFOR 2020. [DOI: 10.1080/10242422.2020.1768245] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- Volkan Taşdemir
- Science Research and Applied Center, Van Yüzüncü yıl University, Van, Turkey
| | - Erbay Kalay
- Kars Vacational School, Kafkas University, Kars, Turkey
| | - Enes Dertli
- Chemical and Metallurgical Engineering Faculty, Food Engineering Department, Yildiz Technical University, Esenler, Istanbul
| | - Engin Şahin
- Faculty of Health Sciences, Department of Nutrition and Dietetics, Bayburt University, Bayburt, Turkey
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Abstract
Synthesis of pyrazole-3-carboxylic acid was progressed via two different protocols, one of
which is solid state. Pyrazole-3-carboxylic acid was converted into different derivatives such as ester,
urea, amide and nitrile. The amide compound was converted to nitrile using SOCl2 and DMF. Solid
state heating of carboxylic acid gave decarboxylated product. Cyclization of tetra-substituted pyrazole
with hydrazines resulted in pyrazolopyridazinones. The antimicrobial activities of the synthesized pyrazole
derivatives against Bacillus cereus, Escherichia coli, Micrococcus luteus, Staphylococcus aureus,
and Saccharomyces cerevisiae were evaluated. One of the pyrazole derivatives which possess nitro group
showed antimicrobial activity in only B. cereus, a Gram-positive bacteria, with an MIC of 128 μg/mL.
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Affiliation(s)
- Hasan Genç
- Department of Sciences, Faculty of Education, Van Yuzuncu Yil University, Van 65080, Turkey
| | - Volkan Taşdemir
- Science Research and Application Center, Van Yuzuncu Yil University, Van 65080, Turkey
| | - İsrafil Tozlu
- Department of Sciences, Faculty of Education, Van Yuzuncu Yil University, Van 65080, Turkey
| | - Erdal Ögün
- Biology Department, Science Faculty, Van Yuzuncu Yil University, Van 65080, Turkey
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Demir Kanmazalp S, Doĝan OE, Taşdemir V, Dege N, Aĝar E, Fritsky IO. Crystal structure and Hirshfeld surface analysis of a Schiff base: ( Z)-6-[(5-chloro-2-meth-oxy-anilino)methyl-idene]-2-hy-droxy-cyclo-hexa-2,4-dien-1-one. Acta Crystallogr E Crystallogr Commun 2019; 75:362-366. [PMID: 30867950 PMCID: PMC6399700 DOI: 10.1107/s2056989019002123] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2019] [Accepted: 02/07/2019] [Indexed: 11/10/2022]
Abstract
The title compound, C14H12ClNO3, is a Schiff base that exists in the keto-enamine tautomeric form and adopts a Z configuration. In the crystal, the dihedral angle between the planes of the benzene rings is 5.34 (15)°. The roughly planar geometry of the mol-ecule is stabilized by a strong intra-molecular N-H⋯O hydrogen bond. In the crystal, pairs of centrosymmetrically related mol-ecules are linked by O-H⋯O hydrogen bonds, forming R 2 2(10) rings. Besides this, the mol-ecules form stacks along the [001] direction with C-H⋯π and C-H⋯Cl contacts between the stacks. The inter-molecular inter-actions in the crystal were analysed using Hirshfeld surfaces. The most significant contribution to the crystal packing is from H⋯H contacts (30.8%).
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Affiliation(s)
| | - Onur Erman Doĝan
- Ondokuz Mayıs University, Faculty of Arts and Sciences, Department of Chemistry, 55139, Kurupelit, Samsun, Turkey
| | - Volkan Taşdemir
- Science Research and Applied Center, Van Yuzuncu Yil University, 65080, Van, Turkey
| | - Necmi Dege
- Ondokuz Mayıs University, Faculty of Arts and Sciences, Department of Physics, 55139, Kurupelit, Samsun, Turkey
| | - Erbil Aĝar
- Ondokuz Mayıs University, Faculty of Arts and Sciences, Department of Chemistry, 55139, Kurupelit, Samsun, Turkey
| | - Igor O. Fritsky
- Department of Chemistry, Taras Shevchenko National University of Kyiv, Volodymyrska 64/13, 01601 Kyiv, Ukraine
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Taşdemir V, Kuzu B, Tan M, Genç H, Menges N. Copper-Catalyzed Synthesis of Fused Imidazopyrazine N-Oxide Skeletons. Synlett 2019. [DOI: 10.1055/s-0037-1610859] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
N-Propargyl-2-aroylimidazoles synthesized and converted into the corresponding ketoximes. Under various conditions, several mono- and diketoxime imidazole derivatives were formed by converting the carbonyl or carbonyl and propargyl groups into oxime groups. N-Propargyl monooxime imidazole derivatives were cyclized by treatment with CuI to give various imidazopyrazine N-oxides. Several copper salts, such as CuOAc, CuSO4, and CuOTf, formed the same cyclization product. This cyclization reaction occurred only in the presence of Cu(I) or Cu(II) salts; other transition metals such as Au, Ag, In, and Fe did not yield cyclic products. The nucleus-independent chemical shift method was used to calculate the aromaticity of the bicyclic rings.
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Affiliation(s)
- Volkan Taşdemir
- Science Research and Applied Center, Van Yüzüncü Yıl University
| | - Burak Kuzu
- SAFF Chemical Reagents R&D Lab. YYU-TEKNOKENT
- Pharmaceutical Chemistry Section, Van Yüzüncü Yıl University
| | - Meltem Tan
- SAFF Chemical Reagents R&D Lab. YYU-TEKNOKENT
- Pharmaceutical Chemistry Section, Van Yüzüncü Yıl University
| | - Hasan Genç
- Faculty of Education, Chemistry Section, Van Yüzüncü Yıl University
| | - Nurettin Menges
- SAFF Chemical Reagents R&D Lab. YYU-TEKNOKENT
- Pharmaceutical Chemistry Section, Van Yüzüncü Yıl University
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Taşdemir V, Kürtüncü M. Clinical and Prognostic Evaluation of Myelin Oligodendrocyte Glycoprotein Autoimmunity in the Central Nervous System. tnd 2018. [DOI: 10.4274/tnd.81598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
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Oguz Akarsu E, Dinçsoy Bir F, Baykal C, Taşdemir V, Kara B, Bebek N, Gürses C, Uyguner O, Baykan B. The Characteristics and Long-Term Course of Epilepsy in Lipoid Proteinosis: A Spectrum From Mild to Severe Seizures in Relation to ECM1 Mutations. Clin EEG Neurosci 2018; 49:192-196. [PMID: 28434238 DOI: 10.1177/1550059417705280] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Lipoid proteinosis (LP) is a rare autosomal recessive disease characterized by deposition of hyaline material in skin and mucosae. Epilepsy, as an extracutaneous manifestation associated with typical mesial temporal calcifications, has already been identified, but its characteristics and long-term prognosis have not been thoroughly investigated. We included 7 consecutive patients with LP with typical intracranial calcifications out of 16 patients with ECM1 mutations and investigated the semiologic features, ictal and interictal EEG findings, and long-term prognosis of epilepsy in this genodermatosis. Four of them had seizures (57.1%), and focal seizures with motionless staring were the most common seizure phenotype, originating from bilateral mesial temporal areas, but interictal spikes were scant. Auras were observed in three patients, mostly as epigastric sensation and déjà vu, which indicated mesial temporal lobe origin. Three patients with homozygous mutations in sixth and seventh exons of the ECM1 gene had a drug-resistant course at the end of long-term follow-up. Molecular genetic testing showed a rare compound heterozygous mutation in one patient, which was also associated with seizures but without drug-resistance. Our findings indicated a spectrum for epilepsy with a desperate drug-resistant course for decades in most patients with LP, which is still an underrecognized disease by neurologists.
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Affiliation(s)
- Emel Oguz Akarsu
- 1 Departments of Neurology and Clinical Neurophysiology, Faculty of Medicine, Istanbul University, Istanbul, Turkey
| | - Firdevs Dinçsoy Bir
- 2 Department of Medical Genetics, Faculty of Medicine, Çanakkale Onsekiz Mart University, Çanakkale, Turkey
| | - Can Baykal
- 3 Department of Dermatology and Venereology, Faculty of Medicine, Istanbul University, Istanbul, Turkey
| | - Volkan Taşdemir
- 1 Departments of Neurology and Clinical Neurophysiology, Faculty of Medicine, Istanbul University, Istanbul, Turkey
| | - Bülent Kara
- 4 Department of Pediatric Neurology, Faculty of Medicine, Kocaeli University, Kocaeli, Turkey
| | - Nerses Bebek
- 1 Departments of Neurology and Clinical Neurophysiology, Faculty of Medicine, Istanbul University, Istanbul, Turkey
| | - Candan Gürses
- 1 Departments of Neurology and Clinical Neurophysiology, Faculty of Medicine, Istanbul University, Istanbul, Turkey
| | - Oya Uyguner
- 5 Department of Medical Genetics, Faculty of Medicine, Istanbul University, Istanbul, Turkey
| | - Betül Baykan
- 1 Departments of Neurology and Clinical Neurophysiology, Faculty of Medicine, Istanbul University, Istanbul, Turkey
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